Protein–RNA interactions for Protein: P35558

PCK1, Phosphoenolpyruvate carboxykinase, cytosolic [GTP], humanhuman

Predictions only

Length 622 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCK1P35558 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC20.04■□□□□ 0.8
PCK1P35558 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
PCK1P35558 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
PCK1P35558 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC20.04■□□□□ 0.8
PCK1P35558 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
PCK1P35558 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC20.04■□□□□ 0.8
PCK1P35558 SNTB2-201ENST00000336278 9789 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
PCK1P35558 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
PCK1P35558 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC20.04■□□□□ 0.8
PCK1P35558 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC20.03■□□□□ 0.8
PCK1P35558 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
PCK1P35558 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC20.03■□□□□ 0.8
PCK1P35558 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
PCK1P35558 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC20.03■□□□□ 0.8
PCK1P35558 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
PCK1P35558 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
PCK1P35558 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC20.03■□□□□ 0.8
PCK1P35558 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC20.03■□□□□ 0.8
PCK1P35558 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
PCK1P35558 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC20.03■□□□□ 0.8
PCK1P35558 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC20.03■□□□□ 0.8
PCK1P35558 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC20.03■□□□□ 0.8
PCK1P35558 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC20.03■□□□□ 0.8
PCK1P35558 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC20.03■□□□□ 0.8
PCK1P35558 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC20.03■□□□□ 0.8
PCK1P35558 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
PCK1P35558 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC20.03■□□□□ 0.8
PCK1P35558 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC20.03■□□□□ 0.8
PCK1P35558 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
PCK1P35558 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
PCK1P35558 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
PCK1P35558 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC20.03■□□□□ 0.8
PCK1P35558 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
PCK1P35558 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
PCK1P35558 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC20.03■□□□□ 0.8
PCK1P35558 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC20.03■□□□□ 0.8
PCK1P35558 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
PCK1P35558 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
PCK1P35558 FP475955.4-201ENST00000623131 1990 ntBASIC20.03■□□□□ 0.8
PCK1P35558 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC20.02■□□□□ 0.8
PCK1P35558 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC20.02■□□□□ 0.8
PCK1P35558 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC20.02■□□□□ 0.8
PCK1P35558 ADAMTS8-201ENST00000257359 4010 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
PCK1P35558 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC20.02■□□□□ 0.8
PCK1P35558 ANKRD6-202ENST00000369408 5258 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
PCK1P35558 IRX1P1-201ENST00000438849 1838 ntBASIC20.02■□□□□ 0.8
PCK1P35558 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
PCK1P35558 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC20.02■□□□□ 0.8
PCK1P35558 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
PCK1P35558 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC20.02■□□□□ 0.8
PCK1P35558 FAM201B-201ENST00000458407 597 ntBASIC20.02■□□□□ 0.8
PCK1P35558 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC20.02■□□□□ 0.8
PCK1P35558 C1QBPP2-201ENST00000528754 825 ntBASIC20.02■□□□□ 0.8
PCK1P35558 RNF121-214ENST00000533380 870 ntTSL 3 BASIC20.02■□□□□ 0.8
PCK1P35558 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC20.02■□□□□ 0.8
PCK1P35558 IRX5-204ENST00000560154 879 ntTSL 5 BASIC20.02■□□□□ 0.8
PCK1P35558 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
PCK1P35558 AL445675.2-201ENST00000620291 557 ntBASIC20.02■□□□□ 0.8
PCK1P35558 CABP2-204ENST00000636477 941 ntTSL 5 BASIC20.02■□□□□ 0.8
PCK1P35558 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC20.02■□□□□ 0.8
PCK1P35558 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC20.02■□□□□ 0.8
PCK1P35558 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
PCK1P35558 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
PCK1P35558 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC20.02■□□□□ 0.8
PCK1P35558 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
PCK1P35558 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC20.02■□□□□ 0.79
PCK1P35558 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.79
PCK1P35558 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
PCK1P35558 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC20.01■□□□□ 0.79
PCK1P35558 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
PCK1P35558 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
PCK1P35558 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
PCK1P35558 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
PCK1P35558 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC20.01■□□□□ 0.79
PCK1P35558 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
PCK1P35558 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
PCK1P35558 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC20.01■□□□□ 0.79
PCK1P35558 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC20.01■□□□□ 0.79
PCK1P35558 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC20.01■□□□□ 0.79
PCK1P35558 TSPY21P-201ENST00000433481 731 ntBASIC20.01■□□□□ 0.79
PCK1P35558 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
PCK1P35558 RPPH1-201ENST00000516869 333 ntBASIC20.01■□□□□ 0.79
PCK1P35558 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC20.01■□□□□ 0.79
PCK1P35558 AL353708.3-201ENST00000610272 989 ntBASIC20.01■□□□□ 0.79
PCK1P35558 ITM2C-210ENST00000620962 501 ntBASIC20.01■□□□□ 0.79
PCK1P35558 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC20.01■□□□□ 0.79
PCK1P35558 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
PCK1P35558 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC20.01■□□□□ 0.79
PCK1P35558 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
PCK1P35558 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
PCK1P35558 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC20.01■□□□□ 0.79
PCK1P35558 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
PCK1P35558 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC20■□□□□ 0.79
PCK1P35558 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
PCK1P35558 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
PCK1P35558 AL049812.1-201ENST00000432563 2267 ntBASIC20■□□□□ 0.79
PCK1P35558 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC20■□□□□ 0.79
PCK1P35558 FEM1AP3-201ENST00000403722 1741 ntBASIC20■□□□□ 0.79
PCK1P35558 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC20■□□□□ 0.79
PCK1P35558 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC20■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 32.5 ms