Protein–RNA interactions for Protein: P32297

CHRNA3, Neuronal acetylcholine receptor subunit alpha-3, humanhuman

Predictions only

Length 505 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA3P32297 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC20.07■□□□□ 0.8
CHRNA3P32297 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC20.07■□□□□ 0.8
CHRNA3P32297 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC20.07■□□□□ 0.8
CHRNA3P32297 CABP2-204ENST00000636477 941 ntTSL 5 BASIC20.07■□□□□ 0.8
CHRNA3P32297 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CHRNA3P32297 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CHRNA3P32297 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CHRNA3P32297 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC20.07■□□□□ 0.8
CHRNA3P32297 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC20.07■□□□□ 0.8
CHRNA3P32297 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CHRNA3P32297 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
CHRNA3P32297 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC20.07■□□□□ 0.8
CHRNA3P32297 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CHRNA3P32297 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CHRNA3P32297 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
CHRNA3P32297 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
CHRNA3P32297 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CHRNA3P32297 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CHRNA3P32297 AC009113.1-201ENST00000570267 2443 ntBASIC20.06■□□□□ 0.8
CHRNA3P32297 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC20.06■□□□□ 0.8
CHRNA3P32297 NBPF21P-201ENST00000425093 1451 ntBASIC20.06■□□□□ 0.8
CHRNA3P32297 AC079598.2-202ENST00000546624 1451 ntBASIC20.06■□□□□ 0.8
CHRNA3P32297 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CHRNA3P32297 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CHRNA3P32297 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC20.06■□□□□ 0.8
CHRNA3P32297 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC20.06■□□□□ 0.8
CHRNA3P32297 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CHRNA3P32297 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC20.06■□□□□ 0.8
CHRNA3P32297 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CHRNA3P32297 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC20.06■□□□□ 0.8
CHRNA3P32297 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CHRNA3P32297 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
CHRNA3P32297 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
CHRNA3P32297 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC20.06■□□□□ 0.8
CHRNA3P32297 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
CHRNA3P32297 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC20.06■□□□□ 0.8
CHRNA3P32297 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CHRNA3P32297 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CHRNA3P32297 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC20.06■□□□□ 0.8
CHRNA3P32297 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CHRNA3P32297 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC20.06■□□□□ 0.8
CHRNA3P32297 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC20.06■□□□□ 0.8
CHRNA3P32297 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC20.06■□□□□ 0.8
CHRNA3P32297 Z98044.1-201ENST00000632503 1764 ntBASIC20.06■□□□□ 0.8
CHRNA3P32297 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
CHRNA3P32297 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC20.05■□□□□ 0.8
CHRNA3P32297 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC20.05■□□□□ 0.8
CHRNA3P32297 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC20.05■□□□□ 0.8
CHRNA3P32297 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
CHRNA3P32297 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CHRNA3P32297 AC104581.1-202ENST00000635932 2618 ntBASIC20.05■□□□□ 0.8
CHRNA3P32297 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC20.05■□□□□ 0.8
CHRNA3P32297 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC20.05■□□□□ 0.8
CHRNA3P32297 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
CHRNA3P32297 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC20.05■□□□□ 0.8
CHRNA3P32297 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC20.05■□□□□ 0.8
CHRNA3P32297 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
CHRNA3P32297 F2R-202ENST00000505600 442 ntTSL 2 BASIC20.05■□□□□ 0.8
CHRNA3P32297 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC20.05■□□□□ 0.8
CHRNA3P32297 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC20.05■□□□□ 0.8
CHRNA3P32297 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CHRNA3P32297 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC20.05■□□□□ 0.8
CHRNA3P32297 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC20.05■□□□□ 0.8
CHRNA3P32297 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
CHRNA3P32297 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CHRNA3P32297 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CHRNA3P32297 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CHRNA3P32297 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
CHRNA3P32297 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
CHRNA3P32297 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CHRNA3P32297 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
CHRNA3P32297 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
CHRNA3P32297 USP49-202ENST00000373010 2446 ntTSL 5 BASIC20.04■□□□□ 0.8
CHRNA3P32297 AC104417.2-201ENST00000562989 1793 ntBASIC20.04■□□□□ 0.8
CHRNA3P32297 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
CHRNA3P32297 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
CHRNA3P32297 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC20.04■□□□□ 0.8
CHRNA3P32297 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC20.04■□□□□ 0.8
CHRNA3P32297 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
CHRNA3P32297 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC20.04■□□□□ 0.8
CHRNA3P32297 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
CHRNA3P32297 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CHRNA3P32297 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC20.04■□□□□ 0.8
CHRNA3P32297 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
CHRNA3P32297 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC20.04■□□□□ 0.8
CHRNA3P32297 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CHRNA3P32297 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC20.03■□□□□ 0.8
CHRNA3P32297 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC20.03■□□□□ 0.8
CHRNA3P32297 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CHRNA3P32297 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CHRNA3P32297 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CHRNA3P32297 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC20.03■□□□□ 0.8
CHRNA3P32297 ANKRD18DP-204ENST00000455355 1975 ntBASIC20.03■□□□□ 0.8
CHRNA3P32297 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC20.03■□□□□ 0.8
CHRNA3P32297 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CHRNA3P32297 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
CHRNA3P32297 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC20.03■□□□□ 0.8
CHRNA3P32297 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC20.03■□□□□ 0.8
CHRNA3P32297 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC20.03■□□□□ 0.8
CHRNA3P32297 RPS2P55-201ENST00000397318 883 ntBASIC20.03■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 18.1 ms