Protein–RNA interactions for Protein: P23025

XPA, DNA repair protein complementing XP-A cells, humanhuman

Predicted RBP Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XPAP23025 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
XPAP23025 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
XPAP23025 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC19.23■□□□□ 0.67
XPAP23025 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
XPAP23025 CDC73-201ENST00000367435 4969 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
XPAP23025 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
XPAP23025 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC19.23■□□□□ 0.67
XPAP23025 BTBD1-202ENST00000379403 1467 ntTSL 5 BASIC19.22■□□□□ 0.67
XPAP23025 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
XPAP23025 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
XPAP23025 ARHGEF28-214ENST00000545377 6351 ntAPPRIS P3 TSL 5 BASIC19.22■□□□□ 0.67
XPAP23025 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
XPAP23025 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
XPAP23025 SELENOF-207ENST00000611507 1785 ntTSL 5 BASIC19.22■□□□□ 0.67
XPAP23025 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC19.22■□□□□ 0.67
XPAP23025 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
XPAP23025 PLCG1-201ENST00000244007 5285 ntAPPRIS P4 TSL 5 BASIC19.22■□□□□ 0.67
XPAP23025 TSPY21P-201ENST00000433481 731 ntBASIC19.22■□□□□ 0.67
XPAP23025 DEUP1-206ENST00000530273 410 ntTSL 3 BASIC19.22■□□□□ 0.67
XPAP23025 EGLN1P1-201ENST00000531623 762 ntBASIC19.22■□□□□ 0.67
XPAP23025 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
XPAP23025 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC19.22■□□□□ 0.67
XPAP23025 ST20-MTHFS-203ENST00000615374 679 ntAPPRIS P1 TSL 3 BASIC19.22■□□□□ 0.67
XPAP23025 AL590627.2-201ENST00000637510 144 ntTSL 5 BASIC19.22■□□□□ 0.67
XPAP23025 KRT8P11-201ENST00000409686 1436 ntBASIC19.22■□□□□ 0.67
XPAP23025 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC19.22■□□□□ 0.67
XPAP23025 AL158211.5-201ENST00000623583 2518 ntBASIC19.22■□□□□ 0.67
XPAP23025 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
XPAP23025 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC19.22■□□□□ 0.67
XPAP23025 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC19.22■□□□□ 0.67
XPAP23025 AC004890.2-202ENST00000463462 1494 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
XPAP23025 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC19.22■□□□□ 0.67
XPAP23025 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
XPAP23025 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC19.22■□□□□ 0.67
XPAP23025 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
XPAP23025 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC19.21■□□□□ 0.67
XPAP23025 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
XPAP23025 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
XPAP23025 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
XPAP23025 AC090340.1-201ENST00000620778 4980 ntBASIC19.21■□□□□ 0.67
XPAP23025 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
XPAP23025 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC19.21■□□□□ 0.67
XPAP23025 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC19.21■□□□□ 0.67
XPAP23025 TSPY1-201ENST00000423647 1171 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
XPAP23025 C20orf166-AS1-202ENST00000436101 761 ntTSL 5 BASIC19.21■□□□□ 0.67
XPAP23025 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC19.21■□□□□ 0.67
XPAP23025 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
XPAP23025 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC19.21■□□□□ 0.67
XPAP23025 PRR29-205ENST00000579184 1052 ntAPPRIS ALT2 TSL 2 BASIC19.21■□□□□ 0.67
XPAP23025 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC19.21■□□□□ 0.67
XPAP23025 AC005363.2-201ENST00000618631 242 ntBASIC19.21■□□□□ 0.67
XPAP23025 AC116562.4-202ENST00000641738 218 ntBASIC19.21■□□□□ 0.67
XPAP23025 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
XPAP23025 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC19.21■□□□□ 0.67
XPAP23025 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC19.21■□□□□ 0.67
XPAP23025 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
XPAP23025 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
XPAP23025 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
XPAP23025 SEMA3C-201ENST00000265361 5174 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.66
XPAP23025 RNF169-201ENST00000299563 7823 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
XPAP23025 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC19.2■□□□□ 0.66
XPAP23025 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC19.2■□□□□ 0.66
XPAP23025 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
XPAP23025 PHF12-205ENST00000577226 7679 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
XPAP23025 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
XPAP23025 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC19.2■□□□□ 0.66
XPAP23025 TSPY14P-201ENST00000303979 915 ntBASIC19.2■□□□□ 0.66
XPAP23025 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
XPAP23025 TMA16-209ENST00000513272 803 ntTSL 2 BASIC19.2■□□□□ 0.66
XPAP23025 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
XPAP23025 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
XPAP23025 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
XPAP23025 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC19.2■□□□□ 0.66
XPAP23025 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
XPAP23025 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC19.2■□□□□ 0.66
XPAP23025 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
XPAP23025 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
XPAP23025 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC19.2■□□□□ 0.66
XPAP23025 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC19.2■□□□□ 0.66
XPAP23025 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC19.19■□□□□ 0.66
XPAP23025 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC19.19■□□□□ 0.66
XPAP23025 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
XPAP23025 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC19.19■□□□□ 0.66
XPAP23025 SOWAHC-201ENST00000356454 4657 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
XPAP23025 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
XPAP23025 CAPN10-203ENST00000352879 862 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
XPAP23025 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
XPAP23025 PRR31-201ENST00000371629 978 ntTSL 2 BASIC19.19■□□□□ 0.66
XPAP23025 SLC25A1P2-201ENST00000430693 912 ntBASIC19.19■□□□□ 0.66
XPAP23025 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC19.19■□□□□ 0.66
XPAP23025 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC19.19■□□□□ 0.66
XPAP23025 AC012306.2-201ENST00000609350 630 ntBASIC19.19■□□□□ 0.66
XPAP23025 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
XPAP23025 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
XPAP23025 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
XPAP23025 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
XPAP23025 PDIA5-201ENST00000316218 1799 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
XPAP23025 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
XPAP23025 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC19.19■□□□□ 0.66
XPAP23025 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 30.4 ms