Protein–RNA interactions for Protein: P13942

COL11A2, Collagen alpha-2(XI) chain, humanhuman

Predicted RBP Predictions only

Length 1,736 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A2P13942 CT47A6-201ENST00000419194 1298 ntAPPRIS P1 TSL 5 BASIC23.32■■□□□ 1.32
COL11A2P13942 CT47A10-201ENST00000430448 1298 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
COL11A2P13942 CT47A5-201ENST00000439466 1298 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
COL11A2P13942 CT47A3-201ENST00000441330 1298 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
COL11A2P13942 CT47A8-201ENST00000457977 1298 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
COL11A2P13942 CT47A2-201ENST00000458218 1298 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
COL11A2P13942 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC23.32■■□□□ 1.32
COL11A2P13942 ABR-204ENST00000543210 1049 ntTSL 2 BASIC23.32■■□□□ 1.32
COL11A2P13942 GPR32P1-201ENST00000601788 811 ntBASIC23.32■■□□□ 1.32
COL11A2P13942 AL121912.1-201ENST00000603683 238 ntBASIC23.32■■□□□ 1.32
COL11A2P13942 AC112497.1-201ENST00000624824 639 ntBASIC23.32■■□□□ 1.32
COL11A2P13942 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
COL11A2P13942 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC23.32■■□□□ 1.32
COL11A2P13942 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC23.32■■□□□ 1.32
COL11A2P13942 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
COL11A2P13942 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC23.32■■□□□ 1.32
COL11A2P13942 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC23.32■■□□□ 1.32
COL11A2P13942 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC23.32■■□□□ 1.32
COL11A2P13942 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
COL11A2P13942 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
COL11A2P13942 TNK2-201ENST00000333602 5270 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
COL11A2P13942 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC23.31■■□□□ 1.32
COL11A2P13942 HINT1-201ENST00000304043 1081 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
COL11A2P13942 ATP6V0C-201ENST00000330398 1175 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
COL11A2P13942 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC23.31■■□□□ 1.32
COL11A2P13942 PCAT7-201ENST00000452148 1164 ntTSL 2 BASIC23.31■■□□□ 1.32
COL11A2P13942 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC23.31■■□□□ 1.32
COL11A2P13942 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC23.31■■□□□ 1.32
COL11A2P13942 AC099336.1-202ENST00000602961 463 ntBASIC23.31■■□□□ 1.32
COL11A2P13942 AC010240.3-201ENST00000607688 395 ntBASIC23.31■■□□□ 1.32
COL11A2P13942 CHMP4A-211ENST00000609024 735 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
COL11A2P13942 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
COL11A2P13942 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC23.31■■□□□ 1.32
COL11A2P13942 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
COL11A2P13942 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
COL11A2P13942 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC23.31■■□□□ 1.32
COL11A2P13942 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
COL11A2P13942 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC23.31■■□□□ 1.32
COL11A2P13942 RSRC1-211ENST00000480820 1410 ntAPPRIS P1 TSL 5 BASIC23.31■■□□□ 1.32
COL11A2P13942 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC23.31■■□□□ 1.32
COL11A2P13942 FCN3-201ENST00000270879 1030 ntAPPRIS P4 TSL 1 (best) BASIC23.3■■□□□ 1.32
COL11A2P13942 LCE1F-201ENST00000334371 357 ntAPPRIS P1 BASIC23.3■■□□□ 1.32
COL11A2P13942 FCN3-202ENST00000354982 997 ntAPPRIS ALT2 TSL 1 (best) BASIC23.3■■□□□ 1.32
COL11A2P13942 PRSS42-201ENST00000429665 882 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
COL11A2P13942 ZBED5-AS1-202ENST00000529014 771 ntTSL 5 BASIC23.3■■□□□ 1.32
COL11A2P13942 ORAOV1-210ENST00000539414 817 ntAPPRIS ALT1 TSL 2 BASIC23.3■■□□□ 1.32
COL11A2P13942 PPP1R1B-208ENST00000580825 1038 ntAPPRIS P1 TSL 5 BASIC23.3■■□□□ 1.32
COL11A2P13942 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC23.3■■□□□ 1.32
COL11A2P13942 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
COL11A2P13942 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC23.3■■□□□ 1.32
COL11A2P13942 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC23.3■■□□□ 1.32
COL11A2P13942 IL34-201ENST00000288098 1607 ntAPPRIS P2 TSL 1 (best) BASIC23.3■■□□□ 1.32
COL11A2P13942 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC23.3■■□□□ 1.32
COL11A2P13942 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC23.3■■□□□ 1.32
COL11A2P13942 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC23.3■■□□□ 1.32
COL11A2P13942 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC23.3■■□□□ 1.32
COL11A2P13942 HYI-201ENST00000372425 1265 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
COL11A2P13942 AP000593.1-201ENST00000393668 712 ntBASIC23.3■■□□□ 1.32
COL11A2P13942 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC23.3■■□□□ 1.32
COL11A2P13942 GRAMD4P1-201ENST00000435181 1110 ntBASIC23.3■■□□□ 1.32
COL11A2P13942 AC007834.1-201ENST00000446473 728 ntTSL 3 BASIC23.3■■□□□ 1.32
COL11A2P13942 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC23.3■■□□□ 1.32
COL11A2P13942 AL356056.2-201ENST00000506914 669 ntTSL 4 BASIC23.3■■□□□ 1.32
COL11A2P13942 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC23.3■■□□□ 1.32
COL11A2P13942 AL121772.3-201ENST00000610840 674 ntBASIC23.3■■□□□ 1.32
COL11A2P13942 AL592071.1-201ENST00000611956 408 ntBASIC23.3■■□□□ 1.32
COL11A2P13942 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC23.3■■□□□ 1.32
COL11A2P13942 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC23.3■■□□□ 1.32
COL11A2P13942 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC23.3■■□□□ 1.32
COL11A2P13942 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
COL11A2P13942 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
COL11A2P13942 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
COL11A2P13942 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC23.29■■□□□ 1.32
COL11A2P13942 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
COL11A2P13942 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC23.29■■□□□ 1.32
COL11A2P13942 KRT8P3-201ENST00000519669 1449 ntBASIC23.29■■□□□ 1.32
COL11A2P13942 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
COL11A2P13942 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
COL11A2P13942 C6orf15-201ENST00000259870 1140 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
COL11A2P13942 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC23.29■■□□□ 1.32
COL11A2P13942 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC23.29■■□□□ 1.32
COL11A2P13942 PENK-208ENST00000523051 772 ntTSL 5 BASIC23.29■■□□□ 1.32
COL11A2P13942 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
COL11A2P13942 TCF3P1-201ENST00000423021 1937 ntBASIC23.29■■□□□ 1.32
COL11A2P13942 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC23.29■■□□□ 1.32
COL11A2P13942 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC23.29■■□□□ 1.32
COL11A2P13942 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
COL11A2P13942 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC23.28■■□□□ 1.32
COL11A2P13942 PARK7-201ENST00000338639 949 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
COL11A2P13942 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC23.28■■□□□ 1.32
COL11A2P13942 AL133343.2-201ENST00000457213 370 ntTSL 3 BASIC23.28■■□□□ 1.32
COL11A2P13942 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC23.28■■□□□ 1.32
COL11A2P13942 AL662844.1-201ENST00000546340 181 ntBASIC23.28■■□□□ 1.32
COL11A2P13942 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC23.28■■□□□ 1.32
COL11A2P13942 RBFADN-201ENST00000562391 1350 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
COL11A2P13942 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
COL11A2P13942 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC23.28■■□□□ 1.32
COL11A2P13942 FKBP3-201ENST00000216330 1684 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
COL11A2P13942 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
COL11A2P13942 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC23.28■■□□□ 1.32
Retrieved 100 of 98,524 protein–RNA pairs in 26.6 ms