Protein–RNA interactions for Protein: P06400

RB1, Retinoblastoma-associated protein, humanhuman

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RB1P06400 AC243773.1-201ENST00000614759 544 ntTSL 5 BASIC20.15■□□□□ 0.82
RB1P06400 AL157888.1-201ENST00000631930 593 ntBASIC20.15■□□□□ 0.82
RB1P06400 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
RB1P06400 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC20.15■□□□□ 0.82
RB1P06400 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC20.15■□□□□ 0.82
RB1P06400 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC20.15■□□□□ 0.82
RB1P06400 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
RB1P06400 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
RB1P06400 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC20.14■□□□□ 0.81
RB1P06400 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC20.14■□□□□ 0.81
RB1P06400 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC20.14■□□□□ 0.81
RB1P06400 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC20.14■□□□□ 0.81
RB1P06400 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC20.14■□□□□ 0.81
RB1P06400 GLYCTK-201ENST00000305690 1371 ntTSL 5 BASIC20.14■□□□□ 0.81
RB1P06400 CLEC4G-201ENST00000328853 1360 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
RB1P06400 ELANE-201ENST00000263621 920 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
RB1P06400 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC20.14■□□□□ 0.81
RB1P06400 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC20.14■□□□□ 0.81
RB1P06400 AC004975.2-201ENST00000442017 565 ntTSL 5 BASIC20.14■□□□□ 0.81
RB1P06400 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
RB1P06400 AC012615.1-201ENST00000565797 1299 ntBASIC20.14■□□□□ 0.81
RB1P06400 SMIM22-203ENST00000588500 525 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
RB1P06400 GPALPP1-207ENST00000611650 899 ntBASIC20.14■□□□□ 0.81
RB1P06400 AL031008.1-201ENST00000619963 541 ntBASIC20.14■□□□□ 0.81
RB1P06400 C10orf142-202ENST00000623589 1010 ntAPPRIS ALT2 TSL 5 BASIC20.14■□□□□ 0.81
RB1P06400 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
RB1P06400 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
RB1P06400 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC20.14■□□□□ 0.81
RB1P06400 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC20.13■□□□□ 0.81
RB1P06400 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
RB1P06400 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
RB1P06400 APBB1-207ENST00000529519 1442 ntTSL 5 BASIC20.13■□□□□ 0.81
RB1P06400 AKR1A1-214ENST00000621846 1360 ntAPPRIS P1 TSL 5 BASIC20.13■□□□□ 0.81
RB1P06400 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
RB1P06400 MAL-203ENST00000353004 873 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
RB1P06400 DUSP15-203ENST00000375966 1077 ntTSL 3 BASIC20.13■□□□□ 0.81
RB1P06400 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC20.13■□□□□ 0.81
RB1P06400 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC20.13■□□□□ 0.81
RB1P06400 AP000867.3-201ENST00000524675 377 ntBASIC20.13■□□□□ 0.81
RB1P06400 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
RB1P06400 PNN-202ENST00000553331 656 ntTSL 3 BASIC20.13■□□□□ 0.81
RB1P06400 CIB2-208ENST00000560618 804 ntTSL 2 BASIC20.13■□□□□ 0.81
RB1P06400 AL732292.2-201ENST00000609649 430 ntBASIC20.13■□□□□ 0.81
RB1P06400 GXYLT1P4-201ENST00000613576 1192 ntBASIC20.13■□□□□ 0.81
RB1P06400 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
RB1P06400 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC20.13■□□□□ 0.81
RB1P06400 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
RB1P06400 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
RB1P06400 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
RB1P06400 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC20.13■□□□□ 0.81
RB1P06400 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC20.13■□□□□ 0.81
RB1P06400 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC20.12■□□□□ 0.81
RB1P06400 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC20.12■□□□□ 0.81
RB1P06400 KRT8P3-201ENST00000519669 1449 ntBASIC20.12■□□□□ 0.81
RB1P06400 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
RB1P06400 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
RB1P06400 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
RB1P06400 KLK12-201ENST00000250351 882 ntAPPRIS P4 TSL 5 BASIC20.12■□□□□ 0.81
RB1P06400 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC20.12■□□□□ 0.81
RB1P06400 LINC01770-202ENST00000430109 510 ntTSL 3 BASIC20.12■□□□□ 0.81
RB1P06400 LINC00265-3P-201ENST00000447588 903 ntBASIC20.12■□□□□ 0.81
RB1P06400 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC20.12■□□□□ 0.81
RB1P06400 CHMP4A-211ENST00000609024 735 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
RB1P06400 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC20.12■□□□□ 0.81
RB1P06400 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC20.12■□□□□ 0.81
RB1P06400 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC20.12■□□□□ 0.81
RB1P06400 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC20.12■□□□□ 0.81
RB1P06400 ASL-205ENST00000395332 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
RB1P06400 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
RB1P06400 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
RB1P06400 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
RB1P06400 SRP9-203ENST00000366839 1596 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
RB1P06400 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
RB1P06400 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
RB1P06400 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
RB1P06400 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC20.11■□□□□ 0.81
RB1P06400 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC20.11■□□□□ 0.81
RB1P06400 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
RB1P06400 LINC02381-201ENST00000508564 1369 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
RB1P06400 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC20.11■□□□□ 0.81
RB1P06400 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC20.11■□□□□ 0.81
RB1P06400 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
RB1P06400 FKBP3-201ENST00000216330 1684 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
RB1P06400 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC20.11■□□□□ 0.81
RB1P06400 BAALC-202ENST00000306391 243 ntTSL 5 BASIC20.11■□□□□ 0.81
RB1P06400 YBEY-201ENST00000329319 1019 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
RB1P06400 ATP6V0C-201ENST00000330398 1175 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
RB1P06400 BAALC-204ENST00000330955 222 ntTSL 5 BASIC20.11■□□□□ 0.81
RB1P06400 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
RB1P06400 CKLF-202ENST00000345436 571 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
RB1P06400 TCEAL2-202ENST00000372780 1100 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
RB1P06400 YBEY-206ENST00000397701 744 ntAPPRIS P1 TSL 2 BASIC20.11■□□□□ 0.81
RB1P06400 RABL2B-209ENST00000435118 1126 ntAPPRIS P3 TSL 1 (best) BASIC20.11■□□□□ 0.81
RB1P06400 AC099805.1-202ENST00000519927 1057 ntTSL 5 BASIC20.11■□□□□ 0.81
RB1P06400 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
RB1P06400 EFCAB11-211ENST00000556609 568 ntTSL 3 BASIC20.11■□□□□ 0.81
RB1P06400 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC20.11■□□□□ 0.81
RB1P06400 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC20.11■□□□□ 0.81
RB1P06400 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC20.11■□□□□ 0.81
RB1P06400 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC20.11■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 29.5 ms