Protein–RNA interactions for Protein: P06028

GYPB, Glycophorin-B, humanhuman

Predictions only

Length 91 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GYPBP06028 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC17.11■□□□□ 0.33
GYPBP06028 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
GYPBP06028 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC17.11■□□□□ 0.33
GYPBP06028 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC17.11■□□□□ 0.33
GYPBP06028 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC17.11■□□□□ 0.33
GYPBP06028 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC17.11■□□□□ 0.33
GYPBP06028 AL121829.2-201ENST00000620908 328 ntBASIC17.11■□□□□ 0.33
GYPBP06028 GAMT-205ENST00000640762 751 ntTSL 5 BASIC17.11■□□□□ 0.33
GYPBP06028 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
GYPBP06028 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
GYPBP06028 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC17.11■□□□□ 0.33
GYPBP06028 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
GYPBP06028 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC17.11■□□□□ 0.33
GYPBP06028 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
GYPBP06028 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
GYPBP06028 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
GYPBP06028 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC17.11■□□□□ 0.33
GYPBP06028 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
GYPBP06028 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC17.11■□□□□ 0.33
GYPBP06028 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
GYPBP06028 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
GYPBP06028 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC17.11■□□□□ 0.33
GYPBP06028 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC17.11■□□□□ 0.33
GYPBP06028 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC17.11■□□□□ 0.33
GYPBP06028 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC17.11■□□□□ 0.33
GYPBP06028 COMP-202ENST00000425807 2292 ntTSL 2 BASIC17.1■□□□□ 0.33
GYPBP06028 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC17.1■□□□□ 0.33
GYPBP06028 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
GYPBP06028 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC17.1■□□□□ 0.33
GYPBP06028 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
GYPBP06028 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC17.1■□□□□ 0.33
GYPBP06028 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
GYPBP06028 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
GYPBP06028 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC17.1■□□□□ 0.33
GYPBP06028 TK2-208ENST00000545043 1120 ntTSL 2 BASIC17.1■□□□□ 0.33
GYPBP06028 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC17.1■□□□□ 0.33
GYPBP06028 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC17.1■□□□□ 0.33
GYPBP06028 AC008687.6-201ENST00000596318 630 ntBASIC17.1■□□□□ 0.33
GYPBP06028 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC17.1■□□□□ 0.33
GYPBP06028 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
GYPBP06028 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
GYPBP06028 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
GYPBP06028 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
GYPBP06028 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
GYPBP06028 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
GYPBP06028 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC17.1■□□□□ 0.33
GYPBP06028 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC17.1■□□□□ 0.33
GYPBP06028 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC17.1■□□□□ 0.33
GYPBP06028 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC17.1■□□□□ 0.33
GYPBP06028 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
GYPBP06028 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
GYPBP06028 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC17.1■□□□□ 0.33
GYPBP06028 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
GYPBP06028 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
GYPBP06028 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC17.09■□□□□ 0.33
GYPBP06028 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
GYPBP06028 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
GYPBP06028 PRKAR2A-201ENST00000265563 6471 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
GYPBP06028 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
GYPBP06028 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC17.09■□□□□ 0.33
GYPBP06028 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC17.09■□□□□ 0.33
GYPBP06028 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC17.09■□□□□ 0.33
GYPBP06028 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
GYPBP06028 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC17.09■□□□□ 0.33
GYPBP06028 AR-207ENST00000612010 3896 ntTSL 5 BASIC17.09■□□□□ 0.33
GYPBP06028 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC17.09■□□□□ 0.33
GYPBP06028 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
GYPBP06028 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
GYPBP06028 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC17.09■□□□□ 0.33
GYPBP06028 AC093525.10-201ENST00000625130 1569 ntBASIC17.09■□□□□ 0.33
GYPBP06028 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC17.09■□□□□ 0.33
GYPBP06028 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
GYPBP06028 FEM1AP3-201ENST00000403722 1741 ntBASIC17.09■□□□□ 0.33
GYPBP06028 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
GYPBP06028 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
GYPBP06028 AC090164.3-201ENST00000610780 2143 ntBASIC17.09■□□□□ 0.33
GYPBP06028 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
GYPBP06028 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
GYPBP06028 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
GYPBP06028 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
GYPBP06028 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
GYPBP06028 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC17.08■□□□□ 0.33
GYPBP06028 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC17.08■□□□□ 0.33
GYPBP06028 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC17.08■□□□□ 0.33
GYPBP06028 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC17.08■□□□□ 0.33
GYPBP06028 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
GYPBP06028 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
GYPBP06028 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
GYPBP06028 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
GYPBP06028 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
GYPBP06028 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
GYPBP06028 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC17.08■□□□□ 0.32
GYPBP06028 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC17.08■□□□□ 0.32
GYPBP06028 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC17.08■□□□□ 0.32
GYPBP06028 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
GYPBP06028 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
GYPBP06028 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
GYPBP06028 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC17.08■□□□□ 0.32
GYPBP06028 ZDHHC23-201ENST00000330212 3778 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
GYPBP06028 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC17.08■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 23 ms