Protein–RNA interactions for Protein: P00352

ALDH1A1, Retinal dehydrogenase 1, humanhuman

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALDH1A1P00352 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
ALDH1A1P00352 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC21.74■■□□□ 1.07
ALDH1A1P00352 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
ALDH1A1P00352 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC21.74■■□□□ 1.07
ALDH1A1P00352 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC21.74■■□□□ 1.07
ALDH1A1P00352 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
ALDH1A1P00352 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC21.73■■□□□ 1.07
ALDH1A1P00352 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC21.73■■□□□ 1.07
ALDH1A1P00352 KRT8P7-201ENST00000533003 1432 ntBASIC21.73■■□□□ 1.07
ALDH1A1P00352 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
ALDH1A1P00352 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC21.73■■□□□ 1.07
ALDH1A1P00352 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
ALDH1A1P00352 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC21.73■■□□□ 1.07
ALDH1A1P00352 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC21.73■■□□□ 1.07
ALDH1A1P00352 PITPNA-AS1-201ENST00000425081 542 ntTSL 2 BASIC21.73■■□□□ 1.07
ALDH1A1P00352 LBX1-AS1-204ENST00000456391 421 ntTSL 5 BASIC21.73■■□□□ 1.07
ALDH1A1P00352 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
ALDH1A1P00352 NDUFB2-209ENST00000472695 503 ntTSL 5 BASIC21.73■■□□□ 1.07
ALDH1A1P00352 VENTXP7-201ENST00000475503 772 ntBASIC21.73■■□□□ 1.07
ALDH1A1P00352 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
ALDH1A1P00352 AC093909.1-201ENST00000504731 1122 ntBASIC21.73■■□□□ 1.07
ALDH1A1P00352 MOK-208ENST00000519058 917 ntTSL 2 BASIC21.73■■□□□ 1.07
ALDH1A1P00352 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC21.73■■□□□ 1.07
ALDH1A1P00352 DYNLL1-204ENST00000548214 616 ntTSL 2 BASIC21.73■■□□□ 1.07
ALDH1A1P00352 AC021739.5-201ENST00000558637 494 ntTSL 3 BASIC21.73■■□□□ 1.07
ALDH1A1P00352 AC068594.1-202ENST00000581657 749 ntTSL 3 BASIC21.73■■□□□ 1.07
ALDH1A1P00352 STX10-207ENST00000589083 1241 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
ALDH1A1P00352 CD24-206ENST00000620405 586 ntAPPRIS ALT2 TSL 2 BASIC21.73■■□□□ 1.07
ALDH1A1P00352 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC21.73■■□□□ 1.07
ALDH1A1P00352 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
ALDH1A1P00352 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
ALDH1A1P00352 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC21.73■■□□□ 1.07
ALDH1A1P00352 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC21.73■■□□□ 1.07
ALDH1A1P00352 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC21.73■■□□□ 1.07
ALDH1A1P00352 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC21.73■■□□□ 1.07
ALDH1A1P00352 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC21.72■■□□□ 1.07
ALDH1A1P00352 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
ALDH1A1P00352 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC21.72■■□□□ 1.07
ALDH1A1P00352 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
ALDH1A1P00352 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
ALDH1A1P00352 CCZ1B-201ENST00000316731 2885 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
ALDH1A1P00352 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
ALDH1A1P00352 PSPH-201ENST00000275605 2131 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
ALDH1A1P00352 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC21.72■■□□□ 1.07
ALDH1A1P00352 SLC25A1P1-201ENST00000528351 927 ntBASIC21.72■■□□□ 1.07
ALDH1A1P00352 ISCU-208ENST00000539593 1071 ntTSL 2 BASIC21.72■■□□□ 1.07
ALDH1A1P00352 KRT73-AS1-202ENST00000551089 563 ntTSL 4 BASIC21.72■■□□□ 1.07
ALDH1A1P00352 MRPL52-215ENST00000556840 398 ntTSL 2 BASIC21.72■■□□□ 1.07
ALDH1A1P00352 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC21.72■■□□□ 1.07
ALDH1A1P00352 AC026471.3-201ENST00000565137 578 ntTSL 2 BASIC21.72■■□□□ 1.07
ALDH1A1P00352 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC21.72■■□□□ 1.07
ALDH1A1P00352 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC21.72■■□□□ 1.07
ALDH1A1P00352 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC21.72■■□□□ 1.07
ALDH1A1P00352 CCNC-219ENST00000627680 896 ntTSL 5 BASIC21.72■■□□□ 1.07
ALDH1A1P00352 PMS2P7-201ENST00000506558 1336 ntBASIC21.72■■□□□ 1.07
ALDH1A1P00352 ZDHHC14-204ENST00000414563 3134 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
ALDH1A1P00352 GULP1-206ENST00000409830 1376 ntAPPRIS P3 TSL 1 (best) BASIC21.72■■□□□ 1.07
ALDH1A1P00352 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
ALDH1A1P00352 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC21.71■■□□□ 1.07
ALDH1A1P00352 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
ALDH1A1P00352 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC21.71■■□□□ 1.07
ALDH1A1P00352 MOSPD3-201ENST00000223054 1053 ntAPPRIS P1 TSL 2 BASIC21.71■■□□□ 1.07
ALDH1A1P00352 MPIG6B-202ENST00000375805 668 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
ALDH1A1P00352 DRAP1-202ENST00000376991 819 ntTSL 5 BASIC21.71■■□□□ 1.07
ALDH1A1P00352 LSM5-204ENST00000409909 740 ntTSL 2 BASIC21.71■■□□□ 1.07
ALDH1A1P00352 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC21.71■■□□□ 1.07
ALDH1A1P00352 FAM197Y8-203ENST00000450145 560 ntBASIC21.71■■□□□ 1.07
ALDH1A1P00352 SMN1-203ENST00000503079 1219 ntTSL 5 BASIC21.71■■□□□ 1.07
ALDH1A1P00352 RABAC1-208ENST00000601078 728 ntTSL 3 BASIC21.71■■□□□ 1.07
ALDH1A1P00352 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC21.71■■□□□ 1.07
ALDH1A1P00352 CCSER2-202ENST00000359979 2066 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
ALDH1A1P00352 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
ALDH1A1P00352 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
ALDH1A1P00352 AC104417.2-201ENST00000562989 1793 ntBASIC21.71■■□□□ 1.07
ALDH1A1P00352 AF106564.1-201ENST00000607058 2553 ntBASIC21.71■■□□□ 1.07
ALDH1A1P00352 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC21.71■■□□□ 1.07
ALDH1A1P00352 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC21.71■■□□□ 1.07
ALDH1A1P00352 TPSD1-201ENST00000211076 1499 ntAPPRIS P2 TSL 1 (best) BASIC21.71■■□□□ 1.07
ALDH1A1P00352 P2RX5-201ENST00000225328 2309 ntAPPRIS P3 TSL 1 (best) BASIC21.71■■□□□ 1.07
ALDH1A1P00352 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.06
ALDH1A1P00352 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
ALDH1A1P00352 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
ALDH1A1P00352 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
ALDH1A1P00352 WRNIP1-205ENST00000618555 2651 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
ALDH1A1P00352 TFF3-201ENST00000291525 407 ntAPPRIS ALT2 TSL 5 BASIC21.7■■□□□ 1.06
ALDH1A1P00352 STX8-201ENST00000306357 1246 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
ALDH1A1P00352 GLIPR1L1-202ENST00000378695 885 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.06
ALDH1A1P00352 DNASE1L2-202ENST00000382437 1222 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
ALDH1A1P00352 AL031284.1-201ENST00000419297 478 ntBASIC21.7■■□□□ 1.06
ALDH1A1P00352 COX10-202ENST00000429152 875 ntTSL 2 BASIC21.7■■□□□ 1.06
ALDH1A1P00352 BET1L-206ENST00000486280 665 ntTSL 3 BASIC21.7■■□□□ 1.06
ALDH1A1P00352 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.06
ALDH1A1P00352 GUSBP12-201ENST00000513727 720 ntBASIC21.7■■□□□ 1.06
ALDH1A1P00352 AC106730.1-201ENST00000566722 1090 ntBASIC21.7■■□□□ 1.06
ALDH1A1P00352 AC011530.1-201ENST00000593999 558 ntTSL 2 BASIC21.7■■□□□ 1.06
ALDH1A1P00352 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC21.7■■□□□ 1.06
ALDH1A1P00352 TP73-AS1-207ENST00000624167 988 ntBASIC21.7■■□□□ 1.06
ALDH1A1P00352 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC21.7■■□□□ 1.06
ALDH1A1P00352 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
ALDH1A1P00352 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Retrieved 100 of 98,524 protein–RNA pairs in 23.1 ms