Protein–RNA interactions for Protein: O95197

RTN3, Reticulon-3, humanhuman

Predicted RBP Predictions only

Length 1,032 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3O95197 TSPY23P-201ENST00000440136 739 ntBASIC20.06■□□□□ 0.8
RTN3O95197 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC20.06■□□□□ 0.8
RTN3O95197 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC20.06■□□□□ 0.8
RTN3O95197 AL353719.1-201ENST00000566847 864 ntBASIC20.06■□□□□ 0.8
RTN3O95197 AC092338.2-201ENST00000568827 1415 ntBASIC20.06■□□□□ 0.8
RTN3O95197 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
RTN3O95197 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
RTN3O95197 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC20.06■□□□□ 0.8
RTN3O95197 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC20.06■□□□□ 0.8
RTN3O95197 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC20.06■□□□□ 0.8
RTN3O95197 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC20.06■□□□□ 0.8
RTN3O95197 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC20.06■□□□□ 0.8
RTN3O95197 PDIA5-201ENST00000316218 1799 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
RTN3O95197 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC20.05■□□□□ 0.8
RTN3O95197 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
RTN3O95197 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
RTN3O95197 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
RTN3O95197 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC20.05■□□□□ 0.8
RTN3O95197 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC20.05■□□□□ 0.8
RTN3O95197 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
RTN3O95197 QPCTL-202ENST00000366382 1814 ntTSL 2 BASIC20.05■□□□□ 0.8
RTN3O95197 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
RTN3O95197 AC126696.3-202ENST00000570159 553 ntTSL 5 BASIC20.05■□□□□ 0.8
RTN3O95197 RN7SL850P-201ENST00000579959 291 ntBASIC20.05■□□□□ 0.8
RTN3O95197 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
RTN3O95197 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC20.05■□□□□ 0.8
RTN3O95197 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
RTN3O95197 MZT1-201ENST00000377818 2299 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
RTN3O95197 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC20.05■□□□□ 0.8
RTN3O95197 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC20.05■□□□□ 0.8
RTN3O95197 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
RTN3O95197 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
RTN3O95197 NDUFA10-214ENST00000620965 1489 ntAPPRIS ALT1 TSL 5 BASIC20.05■□□□□ 0.8
RTN3O95197 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC20.05■□□□□ 0.8
RTN3O95197 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC20.04■□□□□ 0.8
RTN3O95197 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
RTN3O95197 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC20.04■□□□□ 0.8
RTN3O95197 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC20.04■□□□□ 0.8
RTN3O95197 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC20.04■□□□□ 0.8
RTN3O95197 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
RTN3O95197 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
RTN3O95197 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC20.04■□□□□ 0.8
RTN3O95197 POMZP3-201ENST00000275569 1259 ntTSL 2 BASIC20.04■□□□□ 0.8
RTN3O95197 HES7-201ENST00000317814 678 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
RTN3O95197 BEX3-204ENST00000372645 913 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
RTN3O95197 MLLT10-205ENST00000377100 1136 ntTSL 2 BASIC20.04■□□□□ 0.8
RTN3O95197 ATP5G1P1-201ENST00000448724 379 ntBASIC20.04■□□□□ 0.8
RTN3O95197 LY6L-201ENST00000562505 988 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
RTN3O95197 AL929554.1-201ENST00000568665 460 ntAPPRIS P1 TSL 3 BASIC20.04■□□□□ 0.8
RTN3O95197 MAP3K14-AS1-202ENST00000585351 893 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
RTN3O95197 GPX4-207ENST00000589115 812 ntTSL 2 BASIC20.04■□□□□ 0.8
RTN3O95197 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC20.04■□□□□ 0.8
RTN3O95197 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
RTN3O95197 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
RTN3O95197 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
RTN3O95197 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
RTN3O95197 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
RTN3O95197 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
RTN3O95197 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
RTN3O95197 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
RTN3O95197 AC073508.3-201ENST00000619697 1419 ntBASIC20.03■□□□□ 0.8
RTN3O95197 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
RTN3O95197 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
RTN3O95197 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC20.03■□□□□ 0.8
RTN3O95197 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC20.03■□□□□ 0.8
RTN3O95197 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
RTN3O95197 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC20.03■□□□□ 0.8
RTN3O95197 GXYLT1P6-201ENST00000456472 1187 ntBASIC20.03■□□□□ 0.8
RTN3O95197 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC20.03■□□□□ 0.8
RTN3O95197 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC20.03■□□□□ 0.8
RTN3O95197 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
RTN3O95197 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
RTN3O95197 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
RTN3O95197 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
RTN3O95197 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC20.03■□□□□ 0.8
RTN3O95197 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC20.03■□□□□ 0.8
RTN3O95197 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC20.03■□□□□ 0.8
RTN3O95197 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC20.03■□□□□ 0.8
RTN3O95197 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
RTN3O95197 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
RTN3O95197 ST3GAL3-205ENST00000347631 1324 ntTSL 5 BASIC20.02■□□□□ 0.8
RTN3O95197 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC20.02■□□□□ 0.8
RTN3O95197 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
RTN3O95197 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC20.02■□□□□ 0.8
RTN3O95197 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC20.02■□□□□ 0.8
RTN3O95197 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
RTN3O95197 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
RTN3O95197 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC20.02■□□□□ 0.8
RTN3O95197 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
RTN3O95197 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
RTN3O95197 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
RTN3O95197 BOLA3-202ENST00000327428 639 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
RTN3O95197 DGCR6-201ENST00000331444 1214 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
RTN3O95197 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC20.02■□□□□ 0.8
RTN3O95197 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC20.02■□□□□ 0.8
RTN3O95197 AC134772.1-201ENST00000438872 885 ntTSL 3 BASIC20.02■□□□□ 0.8
RTN3O95197 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC20.02■□□□□ 0.8
RTN3O95197 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
RTN3O95197 Z82202.1-201ENST00000623446 1880 ntBASIC20.02■□□□□ 0.8
RTN3O95197 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC20.02■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 50 ms