Protein–RNA interactions for Protein: O94913

PCF11, Pre-mRNA cleavage complex 2 protein Pcf11, humanhuman

Known RBP Predictions only

Length 1,555 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11O94913 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC29.74■■■□□ 2.35
PCF11O94913 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC29.74■■■□□ 2.35
PCF11O94913 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC29.73■■■□□ 2.35
PCF11O94913 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC29.73■■■□□ 2.35
PCF11O94913 NPAP1P7-201ENST00000613027 823 ntBASIC29.73■■■□□ 2.35
PCF11O94913 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC29.73■■■□□ 2.35
PCF11O94913 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC29.73■■■□□ 2.35
PCF11O94913 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC29.73■■■□□ 2.35
PCF11O94913 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC29.73■■■□□ 2.35
PCF11O94913 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC29.73■■■□□ 2.35
PCF11O94913 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC29.73■■■□□ 2.35
PCF11O94913 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC29.73■■■□□ 2.35
PCF11O94913 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC29.73■■■□□ 2.35
PCF11O94913 YDJC-201ENST00000292778 1351 ntAPPRIS P1 TSL 2 BASIC29.73■■■□□ 2.35
PCF11O94913 HEBP2-201ENST00000367697 844 ntTSL 2 BASIC29.73■■■□□ 2.35
PCF11O94913 GJA8-201ENST00000369235 1302 ntAPPRIS P1 BASIC29.73■■■□□ 2.35
PCF11O94913 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC29.73■■■□□ 2.35
PCF11O94913 AC092597.1-201ENST00000487352 616 ntBASIC29.73■■■□□ 2.35
PCF11O94913 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC29.73■■■□□ 2.35
PCF11O94913 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC29.73■■■□□ 2.35
PCF11O94913 KLK8-205ENST00000593490 267 ntTSL 3 BASIC29.73■■■□□ 2.35
PCF11O94913 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC29.72■■■□□ 2.35
PCF11O94913 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC29.72■■■□□ 2.35
PCF11O94913 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC29.72■■■□□ 2.35
PCF11O94913 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC29.72■■■□□ 2.35
PCF11O94913 ILKAP-212ENST00000622223 1088 ntTSL 1 (best) BASIC29.72■■■□□ 2.35
PCF11O94913 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC29.72■■■□□ 2.35
PCF11O94913 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC29.71■■■□□ 2.35
PCF11O94913 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC29.71■■■□□ 2.35
PCF11O94913 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC29.71■■■□□ 2.35
PCF11O94913 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC29.71■■■□□ 2.35
PCF11O94913 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC29.71■■■□□ 2.35
PCF11O94913 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC29.71■■■□□ 2.35
PCF11O94913 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC29.71■■■□□ 2.35
PCF11O94913 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC29.71■■■□□ 2.35
PCF11O94913 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC29.71■■■□□ 2.35
PCF11O94913 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC29.71■■■□□ 2.35
PCF11O94913 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC29.71■■■□□ 2.35
PCF11O94913 AC124016.1-202ENST00000609575 619 ntTSL 2 BASIC29.71■■■□□ 2.35
PCF11O94913 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC29.71■■■□□ 2.35
PCF11O94913 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC29.71■■■□□ 2.35
PCF11O94913 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC29.71■■■□□ 2.35
PCF11O94913 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC29.7■■■□□ 2.35
PCF11O94913 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC29.7■■■□□ 2.35
PCF11O94913 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC29.7■■■□□ 2.35
PCF11O94913 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC29.7■■■□□ 2.35
PCF11O94913 SLX1A-202ENST00000345535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC29.7■■■□□ 2.35
PCF11O94913 SLX1B-202ENST00000351581 762 ntAPPRIS ALT2 TSL 1 (best) BASIC29.7■■■□□ 2.35
PCF11O94913 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC29.7■■■□□ 2.35
PCF11O94913 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC29.7■■■□□ 2.35
PCF11O94913 AP003396.3-201ENST00000530918 778 ntTSL 5 BASIC29.7■■■□□ 2.35
PCF11O94913 RPS15A-205ENST00000565420 802 ntAPPRIS P1 TSL 2 BASIC29.7■■■□□ 2.35
PCF11O94913 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC29.7■■■□□ 2.35
PCF11O94913 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC29.7■■■□□ 2.35
PCF11O94913 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC29.7■■■□□ 2.35
PCF11O94913 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC29.7■■■□□ 2.34
PCF11O94913 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC29.69■■■□□ 2.34
PCF11O94913 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC29.69■■■□□ 2.34
PCF11O94913 ENSA-205ENST00000361532 792 ntTSL 2 BASIC29.69■■■□□ 2.34
PCF11O94913 AC087623.2-201ENST00000528407 534 ntTSL 4 BASIC29.69■■■□□ 2.34
PCF11O94913 AC140113.3-201ENST00000605663 199 ntBASIC29.69■■■□□ 2.34
PCF11O94913 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC29.69■■■□□ 2.34
PCF11O94913 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC29.69■■■□□ 2.34
PCF11O94913 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC29.69■■■□□ 2.34
PCF11O94913 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC29.69■■■□□ 2.34
PCF11O94913 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC29.69■■■□□ 2.34
PCF11O94913 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC29.69■■■□□ 2.34
PCF11O94913 SLC12A2-202ENST00000343225 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC29.69■■■□□ 2.34
PCF11O94913 ARHGEF7-206ENST00000375741 5525 ntTSL 1 (best) BASIC29.69■■■□□ 2.34
PCF11O94913 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC29.69■■■□□ 2.34
PCF11O94913 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC29.69■■■□□ 2.34
PCF11O94913 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC29.69■■■□□ 2.34
PCF11O94913 TMEM190-201ENST00000291934 593 ntAPPRIS P1 TSL 1 (best) BASIC29.69■■■□□ 2.34
PCF11O94913 MRPL24-202ENST00000368211 883 ntAPPRIS P1 TSL 1 (best) BASIC29.69■■■□□ 2.34
PCF11O94913 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC29.69■■■□□ 2.34
PCF11O94913 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC29.69■■■□□ 2.34
PCF11O94913 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC29.69■■■□□ 2.34
PCF11O94913 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC29.68■■■□□ 2.34
PCF11O94913 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC29.68■■■□□ 2.34
PCF11O94913 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC29.68■■■□□ 2.34
PCF11O94913 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC29.68■■■□□ 2.34
PCF11O94913 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC29.68■■■□□ 2.34
PCF11O94913 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC29.68■■■□□ 2.34
PCF11O94913 NMRK1-202ENST00000376808 1121 ntTSL 1 (best) BASIC29.68■■■□□ 2.34
PCF11O94913 AL603832.1-201ENST00000421943 449 ntTSL 5 BASIC29.68■■■□□ 2.34
PCF11O94913 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC29.68■■■□□ 2.34
PCF11O94913 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC29.68■■■□□ 2.34
PCF11O94913 AL121832.1-201ENST00000615180 677 ntTSL 3 BASIC29.68■■■□□ 2.34
PCF11O94913 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC29.68■■■□□ 2.34
PCF11O94913 POLI-202ENST00000406285 2030 ntTSL 2 BASIC29.67■■■□□ 2.34
PCF11O94913 ARHGEF7-205ENST00000375739 5375 ntTSL 1 (best) BASIC29.67■■■□□ 2.34
PCF11O94913 RCC2P3-201ENST00000418112 1537 ntBASIC29.67■■■□□ 2.34
PCF11O94913 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC29.67■■■□□ 2.34
PCF11O94913 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC29.67■■■□□ 2.34
PCF11O94913 PLAC8-202ENST00000411416 786 ntAPPRIS P1 TSL 1 (best) BASIC29.67■■■□□ 2.34
PCF11O94913 AC024243.1-201ENST00000609234 778 ntBASIC29.67■■■□□ 2.34
PCF11O94913 AL117335.1-203ENST00000619200 948 ntTSL 5 BASIC29.67■■■□□ 2.34
PCF11O94913 AC079602.3-201ENST00000623931 403 ntBASIC29.67■■■□□ 2.34
PCF11O94913 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC29.67■■■□□ 2.34
PCF11O94913 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC29.67■■■□□ 2.34
Retrieved 100 of 98,524 protein–RNA pairs in 31.1 ms