Protein–RNA interactions for Protein: O75445

USH2A, Usherin, humanhuman

Predictions only

Length 5,202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USH2AO75445 AC245100.3-201ENST00000441281 285 ntBASIC8.51□□□□□ -1.05
USH2AO75445 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC8.51□□□□□ -1.05
USH2AO75445 RBFADN-201ENST00000562391 1350 ntTSL 1 (best) BASIC8.51□□□□□ -1.05
USH2AO75445 GPAT2P1-201ENST00000444924 1672 ntBASIC8.51□□□□□ -1.05
USH2AO75445 QPCTL-202ENST00000366382 1814 ntTSL 2 BASIC8.51□□□□□ -1.05
USH2AO75445 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC8.5□□□□□ -1.05
USH2AO75445 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC8.5□□□□□ -1.05
USH2AO75445 HS6ST1P1-201ENST00000481504 1234 ntBASIC8.5□□□□□ -1.05
USH2AO75445 AC119403.1-201ENST00000520090 776 ntTSL 5 BASIC8.5□□□□□ -1.05
USH2AO75445 AC020934.1-201ENST00000588469 739 ntTSL 3 BASIC8.5□□□□□ -1.05
USH2AO75445 IER3IP1-202ENST00000639845 832 ntTSL 2 BASIC8.5□□□□□ -1.05
USH2AO75445 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC8.5□□□□□ -1.05
USH2AO75445 CD244-202ENST00000368033 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC8.5□□□□□ -1.05
USH2AO75445 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC8.5□□□□□ -1.05
USH2AO75445 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC8.5□□□□□ -1.05
USH2AO75445 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC8.5□□□□□ -1.05
USH2AO75445 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC8.5□□□□□ -1.05
USH2AO75445 KLC1-205ENST00000380038 2322 ntTSL 2 BASIC8.5□□□□□ -1.05
USH2AO75445 SYCE1-203ENST00000368517 1377 ntAPPRIS P3 TSL 5 BASIC8.5□□□□□ -1.05
USH2AO75445 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC8.5□□□□□ -1.05
USH2AO75445 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC8.5□□□□□ -1.05
USH2AO75445 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC8.5□□□□□ -1.05
USH2AO75445 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC8.5□□□□□ -1.05
USH2AO75445 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC8.5□□□□□ -1.05
USH2AO75445 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC8.5□□□□□ -1.05
USH2AO75445 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC8.5□□□□□ -1.05
USH2AO75445 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC8.5□□□□□ -1.05
USH2AO75445 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC8.5□□□□□ -1.05
USH2AO75445 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC8.5□□□□□ -1.05
USH2AO75445 KRTAP5-6-201ENST00000382160 561 ntAPPRIS P1 BASIC8.5□□□□□ -1.05
USH2AO75445 ZGLP1-201ENST00000403352 1028 ntAPPRIS ALT2 TSL 5 BASIC8.5□□□□□ -1.05
USH2AO75445 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC8.5□□□□□ -1.05
USH2AO75445 AC012363.1-201ENST00000455707 575 ntTSL 4 BASIC8.5□□□□□ -1.05
USH2AO75445 AC005020.2-201ENST00000455905 830 ntAPPRIS P1 TSL 3 BASIC8.5□□□□□ -1.05
USH2AO75445 TMUB1-204ENST00000476627 882 ntAPPRIS P1 TSL 3 BASIC8.5□□□□□ -1.05
USH2AO75445 AC082651.1-201ENST00000478468 832 ntTSL 1 (best) BASIC8.5□□□□□ -1.05
USH2AO75445 LINC02242-201ENST00000507298 641 ntTSL 5 BASIC8.5□□□□□ -1.05
USH2AO75445 AP002449.1-201ENST00000588211 474 ntTSL 2 BASIC8.5□□□□□ -1.05
USH2AO75445 AC025062.2-201ENST00000605477 670 ntBASIC8.5□□□□□ -1.05
USH2AO75445 LINC01714-202ENST00000635451 896 ntTSL 5 BASIC8.5□□□□□ -1.05
USH2AO75445 AL024507.2-201ENST00000606070 2574 ntBASIC8.5□□□□□ -1.05
USH2AO75445 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC8.5□□□□□ -1.05
USH2AO75445 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC8.5□□□□□ -1.05
USH2AO75445 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC8.5□□□□□ -1.05
USH2AO75445 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC8.5□□□□□ -1.05
USH2AO75445 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC8.5□□□□□ -1.05
USH2AO75445 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC8.5□□□□□ -1.05
USH2AO75445 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC8.5□□□□□ -1.05
USH2AO75445 TM2D1-201ENST00000294613 1250 ntAPPRIS P1 TSL 1 (best) BASIC8.5□□□□□ -1.05
USH2AO75445 TM2D1-204ENST00000371180 1248 ntTSL 5 BASIC8.5□□□□□ -1.05
USH2AO75445 RAD51D-205ENST00000460118 1064 ntTSL 5 BASIC8.5□□□□□ -1.05
USH2AO75445 AL449423.1-201ENST00000578935 435 ntTSL 3 BASIC8.5□□□□□ -1.05
USH2AO75445 TM2D1-212ENST00000606498 969 ntAPPRIS P1 TSL 5 BASIC8.5□□□□□ -1.05
USH2AO75445 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC8.5□□□□□ -1.05
USH2AO75445 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC8.5□□□□□ -1.05
USH2AO75445 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC8.5□□□□□ -1.05
USH2AO75445 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC8.5□□□□□ -1.05
USH2AO75445 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC8.5□□□□□ -1.05
USH2AO75445 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC8.5□□□□□ -1.05
USH2AO75445 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC8.49□□□□□ -1.05
USH2AO75445 AL135791.1-201ENST00000429214 826 ntTSL 5 BASIC8.49□□□□□ -1.05
USH2AO75445 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC8.49□□□□□ -1.05
USH2AO75445 LDHAL6A-203ENST00000615355 1042 ntTSL 5 BASIC8.49□□□□□ -1.05
USH2AO75445 CRYBB2P1-202ENST00000382734 1364 ntTSL 1 (best) BASIC8.49□□□□□ -1.05
USH2AO75445 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC8.49□□□□□ -1.05
USH2AO75445 DCAF15-201ENST00000254337 2278 ntAPPRIS P1 TSL 1 (best) BASIC8.49□□□□□ -1.05
USH2AO75445 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC8.49□□□□□ -1.05
USH2AO75445 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC8.49□□□□□ -1.05
USH2AO75445 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC8.49□□□□□ -1.05
USH2AO75445 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC8.49□□□□□ -1.05
USH2AO75445 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC8.49□□□□□ -1.05
USH2AO75445 RABEPK-206ENST00000628863 1537 ntTSL 5 BASIC8.49□□□□□ -1.05
USH2AO75445 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC8.49□□□□□ -1.05
USH2AO75445 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC8.49□□□□□ -1.05
USH2AO75445 DPM3-201ENST00000341298 486 ntAPPRIS P1 TSL 2 BASIC8.49□□□□□ -1.05
USH2AO75445 Z69720.1-201ENST00000601483 472 ntBASIC8.49□□□□□ -1.05
USH2AO75445 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC8.49□□□□□ -1.05
USH2AO75445 RER1-202ENST00000378512 1404 ntTSL 1 (best) BASIC8.49□□□□□ -1.05
USH2AO75445 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC8.49□□□□□ -1.05
USH2AO75445 BTG3-202ENST00000348354 1456 ntAPPRIS P1 TSL 1 (best) BASIC8.49□□□□□ -1.05
USH2AO75445 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC8.49□□□□□ -1.05
USH2AO75445 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC8.49□□□□□ -1.05
USH2AO75445 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC8.49□□□□□ -1.05
USH2AO75445 MRPL53-201ENST00000258105 1162 ntAPPRIS P1 TSL 1 (best) BASIC8.49□□□□□ -1.05
USH2AO75445 KRT18P23-201ENST00000435622 1283 ntBASIC8.49□□□□□ -1.05
USH2AO75445 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC8.49□□□□□ -1.05
USH2AO75445 LINC00668-203ENST00000579012 605 ntTSL 3 BASIC8.49□□□□□ -1.05
USH2AO75445 CCDC61-202ENST00000594087 1017 ntAPPRIS ALT2 TSL 5 BASIC8.49□□□□□ -1.05
USH2AO75445 SWI5-206ENST00000608796 906 ntAPPRIS ALT2 TSL 1 (best) BASIC8.49□□□□□ -1.05
USH2AO75445 AL035252.4-201ENST00000624174 288 ntBASIC8.49□□□□□ -1.05
USH2AO75445 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC8.49□□□□□ -1.05
USH2AO75445 IRX5-201ENST00000320990 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC8.49□□□□□ -1.05
USH2AO75445 DEAF1-201ENST00000382409 2500 ntAPPRIS P1 TSL 1 (best) BASIC8.49□□□□□ -1.05
USH2AO75445 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC8.49□□□□□ -1.05
USH2AO75445 CGREF1-201ENST00000260595 1177 ntAPPRIS ALT2 TSL 5 BASIC8.49□□□□□ -1.05
USH2AO75445 CLEC1B-201ENST00000298527 952 ntAPPRIS P1 TSL 1 (best) BASIC8.49□□□□□ -1.05
USH2AO75445 METTL26-201ENST00000301686 794 ntAPPRIS P1 TSL 2 BASIC8.49□□□□□ -1.05
USH2AO75445 MPIG6B-202ENST00000375805 668 ntAPPRIS ALT2 TSL 1 (best) BASIC8.49□□□□□ -1.05
USH2AO75445 METTL26-205ENST00000397666 726 ntTSL 2 BASIC8.49□□□□□ -1.05
USH2AO75445 AC095060.1-201ENST00000502455 549 ntTSL 4 BASIC8.49□□□□□ -1.05
Retrieved 100 of 98,524 protein–RNA pairs in 28.4 ms