Protein–RNA interactions for Protein: O60494

CUBN, Cubilin, humanhuman

Predictions only

Length 3,623 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUBNO60494 RPL18-209ENST00000550645 463 ntTSL 5 BASIC15.24■□□□□ 0.03
CUBNO60494 RPL18-214ENST00000552588 559 ntTSL 3 BASIC15.24■□□□□ 0.03
CUBNO60494 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC15.24■□□□□ 0.03
CUBNO60494 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC15.24■□□□□ 0.03
CUBNO60494 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
CUBNO60494 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
CUBNO60494 CLEC4G-201ENST00000328853 1360 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CUBNO60494 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CUBNO60494 MOS-201ENST00000311923 1041 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
CUBNO60494 MIR662-201ENST00000384847 95 ntBASIC15.23■□□□□ 0.03
CUBNO60494 OTOS-202ENST00000391989 645 ntAPPRIS P1 TSL 3 BASIC15.23■□□□□ 0.03
CUBNO60494 AC093901.1-201ENST00000414886 778 ntTSL 5 BASIC15.23■□□□□ 0.03
CUBNO60494 SBDSP1-202ENST00000423945 618 ntTSL 3 BASIC15.23■□□□□ 0.03
CUBNO60494 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC15.23■□□□□ 0.03
CUBNO60494 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC15.23■□□□□ 0.03
CUBNO60494 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
CUBNO60494 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
CUBNO60494 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
CUBNO60494 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC15.23■□□□□ 0.03
CUBNO60494 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CUBNO60494 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
CUBNO60494 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CUBNO60494 AC073314.1-201ENST00000568729 2216 ntBASIC15.23■□□□□ 0.03
CUBNO60494 CNPY2-201ENST00000273308 1214 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CUBNO60494 MCFD2-208ENST00000409973 821 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
CUBNO60494 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC15.23■□□□□ 0.03
CUBNO60494 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CUBNO60494 KRT8P26-201ENST00000534154 1276 ntBASIC15.23■□□□□ 0.03
CUBNO60494 AC024243.1-201ENST00000609234 778 ntBASIC15.23■□□□□ 0.03
CUBNO60494 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CUBNO60494 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC15.23■□□□□ 0.03
CUBNO60494 LINC00265-3P-201ENST00000447588 903 ntBASIC15.23■□□□□ 0.03
CUBNO60494 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC15.23■□□□□ 0.03
CUBNO60494 AC113382.1-201ENST00000500267 1253 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
CUBNO60494 C1QB-203ENST00000509305 1254 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CUBNO60494 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
CUBNO60494 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
CUBNO60494 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
CUBNO60494 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CUBNO60494 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC15.22■□□□□ 0.03
CUBNO60494 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CUBNO60494 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
CUBNO60494 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
CUBNO60494 AL356056.2-201ENST00000506914 669 ntTSL 4 BASIC15.22■□□□□ 0.03
CUBNO60494 AF238378.1-201ENST00000526806 358 ntBASIC15.22■□□□□ 0.03
CUBNO60494 TK1-205ENST00000590862 642 ntTSL 3 BASIC15.22■□□□□ 0.03
CUBNO60494 AC138894.3-201ENST00000603787 634 ntBASIC15.22■□□□□ 0.03
CUBNO60494 AL355385.1-201ENST00000606123 409 ntBASIC15.22■□□□□ 0.03
CUBNO60494 AP005212.1-201ENST00000581547 1997 ntBASIC15.22■□□□□ 0.03
CUBNO60494 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CUBNO60494 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
CUBNO60494 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CUBNO60494 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
CUBNO60494 RPLP0-219ENST00000551150 1344 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CUBNO60494 AC034213.1-201ENST00000507681 806 ntTSL 3 BASIC15.22■□□□□ 0.03
CUBNO60494 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC15.22■□□□□ 0.03
CUBNO60494 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
CUBNO60494 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC15.22■□□□□ 0.03
CUBNO60494 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC15.22■□□□□ 0.03
CUBNO60494 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC15.22■□□□□ 0.03
CUBNO60494 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CUBNO60494 LSM5-204ENST00000409909 740 ntTSL 2 BASIC15.22■□□□□ 0.03
CUBNO60494 RNF126P1-202ENST00000569893 925 ntBASIC15.22■□□□□ 0.03
CUBNO60494 H2BFWT-202ENST00000611083 528 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CUBNO60494 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC15.22■□□□□ 0.03
CUBNO60494 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.03
CUBNO60494 SPSB1-201ENST00000328089 3120 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CUBNO60494 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CUBNO60494 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.03
CUBNO60494 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CUBNO60494 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
CUBNO60494 DUSP15-203ENST00000375966 1077 ntTSL 3 BASIC15.21■□□□□ 0.03
CUBNO60494 PCAT7-201ENST00000452148 1164 ntTSL 2 BASIC15.21■□□□□ 0.03
CUBNO60494 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
CUBNO60494 GTPBP8-203ENST00000383678 1360 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CUBNO60494 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC15.21■□□□□ 0.03
CUBNO60494 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
CUBNO60494 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
CUBNO60494 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC15.21■□□□□ 0.03
CUBNO60494 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC15.21■□□□□ 0.03
CUBNO60494 CRELD2-202ENST00000403427 1242 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
CUBNO60494 SLC2A1-204ENST00000460369 541 ntTSL 2 BASIC15.21■□□□□ 0.03
CUBNO60494 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
CUBNO60494 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC15.21■□□□□ 0.03
CUBNO60494 AC093525.10-201ENST00000625130 1569 ntBASIC15.21■□□□□ 0.03
CUBNO60494 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC15.21■□□□□ 0.02
CUBNO60494 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC15.21■□□□□ 0.02
CUBNO60494 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
CUBNO60494 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
CUBNO60494 IGF2-202ENST00000381392 1005 ntAPPRIS ALT1 TSL 1 (best) BASIC15.21■□□□□ 0.02
CUBNO60494 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
CUBNO60494 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
CUBNO60494 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
CUBNO60494 ANXA8-202ENST00000583448 1971 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
CUBNO60494 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
CUBNO60494 MIR1233-2-201ENST00000408138 82 ntBASIC15.2■□□□□ 0.02
CUBNO60494 MIR1233-1-201ENST00000408722 82 ntBASIC15.2■□□□□ 0.02
CUBNO60494 AL162497.1-201ENST00000615635 518 ntTSL 4 BASIC15.2■□□□□ 0.02
CUBNO60494 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CUBNO60494 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 21.7 ms