Protein–RNA interactions for Protein: O43707

ACTN4, Alpha-actinin-4, humanhuman

Known RBP Predictions only

Length 911 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4O43707 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC21.37■■□□□ 1.01
ACTN4O43707 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
ACTN4O43707 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC21.37■■□□□ 1.01
ACTN4O43707 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC21.37■■□□□ 1.01
ACTN4O43707 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
ACTN4O43707 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
ACTN4O43707 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
ACTN4O43707 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC21.37■■□□□ 1.01
ACTN4O43707 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC21.37■■□□□ 1.01
ACTN4O43707 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC21.37■■□□□ 1.01
ACTN4O43707 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
ACTN4O43707 ISG20-202ENST00000379224 540 ntTSL 3 BASIC21.37■■□□□ 1.01
ACTN4O43707 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC21.37■■□□□ 1.01
ACTN4O43707 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC21.37■■□□□ 1.01
ACTN4O43707 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC21.37■■□□□ 1.01
ACTN4O43707 MIR4651-201ENST00000582622 73 ntBASIC21.37■■□□□ 1.01
ACTN4O43707 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC21.37■■□□□ 1.01
ACTN4O43707 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC21.37■■□□□ 1.01
ACTN4O43707 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
ACTN4O43707 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
ACTN4O43707 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC21.37■■□□□ 1.01
ACTN4O43707 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC21.37■■□□□ 1.01
ACTN4O43707 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
ACTN4O43707 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
ACTN4O43707 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC21.36■■□□□ 1.01
ACTN4O43707 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
ACTN4O43707 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC21.36■■□□□ 1.01
ACTN4O43707 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
ACTN4O43707 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC21.36■■□□□ 1.01
ACTN4O43707 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC21.36■■□□□ 1.01
ACTN4O43707 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC21.36■■□□□ 1.01
ACTN4O43707 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC21.36■■□□□ 1.01
ACTN4O43707 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
ACTN4O43707 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC21.36■■□□□ 1.01
ACTN4O43707 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC21.36■■□□□ 1.01
ACTN4O43707 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC21.36■■□□□ 1.01
ACTN4O43707 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC21.36■■□□□ 1.01
ACTN4O43707 AC006058.3-201ENST00000606217 1069 ntBASIC21.36■■□□□ 1.01
ACTN4O43707 AC110285.5-201ENST00000611501 352 ntBASIC21.36■■□□□ 1.01
ACTN4O43707 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC21.36■■□□□ 1.01
ACTN4O43707 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC21.36■■□□□ 1.01
ACTN4O43707 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC21.36■■□□□ 1.01
ACTN4O43707 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
ACTN4O43707 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC21.36■■□□□ 1.01
ACTN4O43707 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC21.36■■□□□ 1.01
ACTN4O43707 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC21.36■■□□□ 1.01
ACTN4O43707 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC21.36■■□□□ 1.01
ACTN4O43707 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC21.35■■□□□ 1.01
ACTN4O43707 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC21.35■■□□□ 1.01
ACTN4O43707 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC21.35■■□□□ 1.01
ACTN4O43707 MCC-208ENST00000514701 2855 ntTSL 2 BASIC21.35■■□□□ 1.01
ACTN4O43707 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
ACTN4O43707 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
ACTN4O43707 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC21.35■■□□□ 1.01
ACTN4O43707 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
ACTN4O43707 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC21.35■■□□□ 1.01
ACTN4O43707 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
ACTN4O43707 RPP25L-201ENST00000297613 1092 ntAPPRIS P1 TSL 2 BASIC21.35■■□□□ 1.01
ACTN4O43707 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC21.35■■□□□ 1.01
ACTN4O43707 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
ACTN4O43707 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC21.35■■□□□ 1.01
ACTN4O43707 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC21.35■■□□□ 1.01
ACTN4O43707 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
ACTN4O43707 POU5F1P3-201ENST00000428824 1078 ntBASIC21.35■■□□□ 1.01
ACTN4O43707 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC21.35■■□□□ 1.01
ACTN4O43707 GLRB-205ENST00000512619 728 ntTSL 3 BASIC21.35■■□□□ 1.01
ACTN4O43707 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC21.35■■□□□ 1.01
ACTN4O43707 AL445675.2-201ENST00000620291 557 ntBASIC21.35■■□□□ 1.01
ACTN4O43707 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
ACTN4O43707 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC21.35■■□□□ 1.01
ACTN4O43707 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC21.35■■□□□ 1.01
ACTN4O43707 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
ACTN4O43707 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC21.35■■□□□ 1.01
ACTN4O43707 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
ACTN4O43707 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC21.35■■□□□ 1.01
ACTN4O43707 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC21.35■■□□□ 1.01
ACTN4O43707 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC21.35■■□□□ 1.01
ACTN4O43707 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
ACTN4O43707 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
ACTN4O43707 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC21.35■■□□□ 1.01
ACTN4O43707 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
ACTN4O43707 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC21.34■■□□□ 1.01
ACTN4O43707 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
ACTN4O43707 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC21.34■■□□□ 1.01
ACTN4O43707 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC21.34■■□□□ 1.01
ACTN4O43707 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC21.34■■□□□ 1.01
ACTN4O43707 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC21.34■■□□□ 1.01
ACTN4O43707 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC21.34■■□□□ 1.01
ACTN4O43707 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC21.34■■□□□ 1.01
ACTN4O43707 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC21.34■■□□□ 1.01
ACTN4O43707 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC21.34■■□□□ 1.01
ACTN4O43707 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC21.34■■□□□ 1.01
ACTN4O43707 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
ACTN4O43707 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
ACTN4O43707 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC21.34■■□□□ 1.01
ACTN4O43707 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC21.34■■□□□ 1.01
ACTN4O43707 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC21.34■■□□□ 1.01
ACTN4O43707 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
ACTN4O43707 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
ACTN4O43707 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Retrieved 100 of 98,524 protein–RNA pairs in 21.8 ms