Protein–RNA interactions for Protein: O14646

CHD1, Chromodomain-helicase-DNA-binding protein 1, humanhuman

Predictions only

Length 1,710 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1O14646 CASK-201ENST00000378154 2494 ntTSL 5 BASIC30.89■■■□□ 2.54
CHD1O14646 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC30.89■■■□□ 2.54
CHD1O14646 PANK2-201ENST00000316562 2280 ntAPPRIS P2 TSL 1 (best) BASIC30.89■■■□□ 2.53
CHD1O14646 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC30.88■■■□□ 2.53
CHD1O14646 ZNF259P1-201ENST00000407656 1365 ntBASIC30.88■■■□□ 2.53
CHD1O14646 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC30.88■■■□□ 2.53
CHD1O14646 CCT6P1-202ENST00000442266 1317 ntTSL 2 BASIC30.88■■■□□ 2.53
CHD1O14646 DTNB-210ENST00000407186 2275 ntTSL 5 BASIC30.88■■■□□ 2.53
CHD1O14646 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC30.88■■■□□ 2.53
CHD1O14646 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC30.88■■■□□ 2.53
CHD1O14646 ELOF1-201ENST00000252445 1019 ntAPPRIS P1 TSL 2 BASIC30.88■■■□□ 2.53
CHD1O14646 YWHAZ-203ENST00000395951 964 ntAPPRIS P1 TSL 2 BASIC30.88■■■□□ 2.53
CHD1O14646 AC004967.1-201ENST00000453589 447 ntBASIC30.88■■■□□ 2.53
CHD1O14646 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC30.88■■■□□ 2.53
CHD1O14646 MVB12A-211ENST00000529939 1091 ntTSL 3 BASIC30.88■■■□□ 2.53
CHD1O14646 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC30.88■■■□□ 2.53
CHD1O14646 ARMC7-203ENST00000581078 1002 ntTSL 2 BASIC30.88■■■□□ 2.53
CHD1O14646 AC020934.1-201ENST00000588469 739 ntTSL 3 BASIC30.88■■■□□ 2.53
CHD1O14646 LDHAL6A-203ENST00000615355 1042 ntTSL 5 BASIC30.88■■■□□ 2.53
CHD1O14646 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC30.88■■■□□ 2.53
CHD1O14646 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC30.88■■■□□ 2.53
CHD1O14646 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC30.88■■■□□ 2.53
CHD1O14646 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC30.88■■■□□ 2.53
CHD1O14646 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC30.88■■■□□ 2.53
CHD1O14646 TM2D1-201ENST00000294613 1250 ntAPPRIS P1 TSL 1 (best) BASIC30.87■■■□□ 2.53
CHD1O14646 TM2D1-204ENST00000371180 1248 ntTSL 5 BASIC30.87■■■□□ 2.53
CHD1O14646 MED15P5-201ENST00000423150 992 ntBASIC30.87■■■□□ 2.53
CHD1O14646 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC30.87■■■□□ 2.53
CHD1O14646 TM2D1-212ENST00000606498 969 ntAPPRIS P1 TSL 5 BASIC30.87■■■□□ 2.53
CHD1O14646 LINC01714-202ENST00000635451 896 ntTSL 5 BASIC30.87■■■□□ 2.53
CHD1O14646 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC30.87■■■□□ 2.53
CHD1O14646 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC30.87■■■□□ 2.53
CHD1O14646 FEM1AP4-201ENST00000443167 1987 ntBASIC30.87■■■□□ 2.53
CHD1O14646 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC30.87■■■□□ 2.53
CHD1O14646 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC30.87■■■□□ 2.53
CHD1O14646 PTH2-201ENST00000270631 459 ntAPPRIS P1 TSL 1 (best) BASIC30.87■■■□□ 2.53
CHD1O14646 GNB2-205ENST00000419828 1285 ntTSL 5 BASIC30.87■■■□□ 2.53
CHD1O14646 RPS8P6-201ENST00000426177 609 ntBASIC30.87■■■□□ 2.53
CHD1O14646 HNRNPDP1-201ENST00000439535 754 ntBASIC30.87■■■□□ 2.53
CHD1O14646 AC027117.2-201ENST00000522768 510 ntTSL 3 BASIC30.87■■■□□ 2.53
CHD1O14646 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC30.87■■■□□ 2.53
CHD1O14646 GPX4-212ENST00000616066 924 ntAPPRIS ALT1 TSL 5 BASIC30.87■■■□□ 2.53
CHD1O14646 MED16-213ENST00000616387 1078 ntTSL 1 (best) BASIC30.87■■■□□ 2.53
CHD1O14646 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC30.86■■■□□ 2.53
CHD1O14646 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC30.86■■■□□ 2.53
CHD1O14646 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC30.86■■■□□ 2.53
CHD1O14646 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC30.86■■■□□ 2.53
CHD1O14646 KLC1-205ENST00000380038 2322 ntTSL 2 BASIC30.86■■■□□ 2.53
CHD1O14646 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC30.86■■■□□ 2.53
CHD1O14646 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC30.86■■■□□ 2.53
CHD1O14646 AL110118.2-203ENST00000557574 554 ntAPPRIS P1 TSL 4 BASIC30.86■■■□□ 2.53
CHD1O14646 AC034105.1-201ENST00000563488 319 ntBASIC30.86■■■□□ 2.53
CHD1O14646 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC30.86■■■□□ 2.53
CHD1O14646 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC30.86■■■□□ 2.53
CHD1O14646 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC30.86■■■□□ 2.53
CHD1O14646 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC30.85■■■□□ 2.53
CHD1O14646 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC30.85■■■□□ 2.53
CHD1O14646 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC30.85■■■□□ 2.53
CHD1O14646 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC30.85■■■□□ 2.53
CHD1O14646 AP000763.4-201ENST00000544674 752 ntTSL 5 BASIC30.85■■■□□ 2.53
CHD1O14646 GDI1-204ENST00000447750 2474 ntAPPRIS P1 TSL 1 (best) BASIC30.85■■■□□ 2.53
CHD1O14646 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC30.85■■■□□ 2.53
CHD1O14646 ANKRD18DP-204ENST00000455355 1975 ntBASIC30.85■■■□□ 2.53
CHD1O14646 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC30.85■■■□□ 2.53
CHD1O14646 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC30.85■■■□□ 2.53
CHD1O14646 IGHGP-201ENST00000390555 1178 ntBASIC30.84■■■□□ 2.53
CHD1O14646 FCGRT-210ENST00000596975 1054 ntTSL 5 BASIC30.84■■■□□ 2.53
CHD1O14646 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC30.84■■■□□ 2.53
CHD1O14646 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC30.84■■■□□ 2.53
CHD1O14646 DGUOK-201ENST00000264093 1144 ntAPPRIS P1 TSL 1 (best) BASIC30.84■■■□□ 2.53
CHD1O14646 DGUOK-202ENST00000348222 880 ntTSL 2 BASIC30.84■■■□□ 2.53
CHD1O14646 CSF3-203ENST00000394148 622 ntTSL 3 BASIC30.84■■■□□ 2.53
CHD1O14646 PAM16-208ENST00000573553 722 ntTSL 2 BASIC30.84■■■□□ 2.53
CHD1O14646 CCDC61-202ENST00000594087 1017 ntAPPRIS ALT2 TSL 5 BASIC30.84■■■□□ 2.53
CHD1O14646 LINC00623-201ENST00000613486 486 ntTSL 5 BASIC30.84■■■□□ 2.53
CHD1O14646 DGUOK-208ENST00000629438 1029 ntTSL 1 (best) BASIC30.84■■■□□ 2.53
CHD1O14646 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC30.83■■■□□ 2.53
CHD1O14646 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC30.83■■■□□ 2.53
CHD1O14646 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC30.83■■■□□ 2.53
CHD1O14646 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC30.83■■■□□ 2.53
CHD1O14646 SCARNA2-201ENST00000458748 420 ntBASIC30.83■■■□□ 2.53
CHD1O14646 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC30.83■■■□□ 2.53
CHD1O14646 DHDH-204ENST00000523250 634 ntTSL 5 BASIC30.83■■■□□ 2.53
CHD1O14646 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC30.83■■■□□ 2.53
CHD1O14646 IRF8-202ENST00000562492 946 ntTSL 3 BASIC30.83■■■□□ 2.53
CHD1O14646 AL356488.2-201ENST00000602755 427 ntBASIC30.83■■■□□ 2.53
CHD1O14646 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC30.83■■■□□ 2.53
CHD1O14646 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC30.83■■■□□ 2.53
CHD1O14646 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC30.83■■■□□ 2.53
CHD1O14646 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC30.83■■■□□ 2.53
CHD1O14646 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC30.83■■■□□ 2.53
CHD1O14646 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC30.83■■■□□ 2.53
CHD1O14646 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC30.83■■■□□ 2.53
CHD1O14646 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC30.83■■■□□ 2.53
CHD1O14646 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC30.83■■■□□ 2.53
CHD1O14646 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC30.83■■■□□ 2.53
CHD1O14646 DPF3-204ENST00000546183 1514 ntTSL 2 BASIC30.82■■■□□ 2.52
CHD1O14646 C21orf33-205ENST00000427803 1077 ntTSL 2 BASIC30.82■■■□□ 2.52
CHD1O14646 RN7SL606P-201ENST00000472779 293 ntBASIC30.82■■■□□ 2.52
CHD1O14646 FAM197Y3-203ENST00000618346 717 ntBASIC30.82■■■□□ 2.52
Retrieved 100 of 98,524 protein–RNA pairs in 49.1 ms