Protein–RNA interactions for Protein: O00322

UPK1A, Uroplakin-1a, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1AO00322 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC18.07■□□□□ 0.48
UPK1AO00322 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC18.07■□□□□ 0.48
UPK1AO00322 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
UPK1AO00322 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC18.07■□□□□ 0.48
UPK1AO00322 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC18.07■□□□□ 0.48
UPK1AO00322 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
UPK1AO00322 ISG20-202ENST00000379224 540 ntTSL 3 BASIC18.07■□□□□ 0.48
UPK1AO00322 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC18.07■□□□□ 0.48
UPK1AO00322 AC133681.1-201ENST00000465482 601 ntBASIC18.07■□□□□ 0.48
UPK1AO00322 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
UPK1AO00322 C1QL1P1-201ENST00000568105 661 ntBASIC18.07■□□□□ 0.48
UPK1AO00322 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
UPK1AO00322 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC18.07■□□□□ 0.48
UPK1AO00322 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
UPK1AO00322 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC18.07■□□□□ 0.48
UPK1AO00322 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
UPK1AO00322 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
UPK1AO00322 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
UPK1AO00322 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC18.07■□□□□ 0.48
UPK1AO00322 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC18.07■□□□□ 0.48
UPK1AO00322 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
UPK1AO00322 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
UPK1AO00322 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC18.06■□□□□ 0.48
UPK1AO00322 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
UPK1AO00322 NOC2LP1-202ENST00000452600 2235 ntBASIC18.06■□□□□ 0.48
UPK1AO00322 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC18.06■□□□□ 0.48
UPK1AO00322 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
UPK1AO00322 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC18.06■□□□□ 0.48
UPK1AO00322 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
UPK1AO00322 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
UPK1AO00322 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC18.06■□□□□ 0.48
UPK1AO00322 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC18.06■□□□□ 0.48
UPK1AO00322 TSPY20P-201ENST00000450910 630 ntBASIC18.06■□□□□ 0.48
UPK1AO00322 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
UPK1AO00322 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC18.06■□□□□ 0.48
UPK1AO00322 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC18.06■□□□□ 0.48
UPK1AO00322 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
UPK1AO00322 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC18.06■□□□□ 0.48
UPK1AO00322 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC18.06■□□□□ 0.48
UPK1AO00322 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
UPK1AO00322 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC18.06■□□□□ 0.48
UPK1AO00322 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC18.06■□□□□ 0.48
UPK1AO00322 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC18.06■□□□□ 0.48
UPK1AO00322 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
UPK1AO00322 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC18.06■□□□□ 0.48
UPK1AO00322 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC18.06■□□□□ 0.48
UPK1AO00322 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
UPK1AO00322 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC18.06■□□□□ 0.48
UPK1AO00322 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
UPK1AO00322 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
UPK1AO00322 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
UPK1AO00322 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
UPK1AO00322 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
UPK1AO00322 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC18.05■□□□□ 0.48
UPK1AO00322 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
UPK1AO00322 Z98044.1-201ENST00000632503 1764 ntBASIC18.05■□□□□ 0.48
UPK1AO00322 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
UPK1AO00322 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
UPK1AO00322 AKR1A1-201ENST00000351829 1166 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
UPK1AO00322 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC18.05■□□□□ 0.48
UPK1AO00322 KRT16P5-201ENST00000455284 522 ntBASIC18.05■□□□□ 0.48
UPK1AO00322 FAM201B-201ENST00000458407 597 ntBASIC18.05■□□□□ 0.48
UPK1AO00322 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC18.05■□□□□ 0.48
UPK1AO00322 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
UPK1AO00322 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC18.05■□□□□ 0.48
UPK1AO00322 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC18.05■□□□□ 0.48
UPK1AO00322 AC110285.5-201ENST00000611501 352 ntBASIC18.05■□□□□ 0.48
UPK1AO00322 MMD2-204ENST00000612910 778 ntTSL 5 BASIC18.05■□□□□ 0.48
UPK1AO00322 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
UPK1AO00322 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC18.05■□□□□ 0.48
UPK1AO00322 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
UPK1AO00322 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
UPK1AO00322 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC18.05■□□□□ 0.48
UPK1AO00322 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
UPK1AO00322 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
UPK1AO00322 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC18.05■□□□□ 0.48
UPK1AO00322 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
UPK1AO00322 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
UPK1AO00322 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC18.04■□□□□ 0.48
UPK1AO00322 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC18.04■□□□□ 0.48
UPK1AO00322 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
UPK1AO00322 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC18.04■□□□□ 0.48
UPK1AO00322 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC18.04■□□□□ 0.48
UPK1AO00322 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
UPK1AO00322 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC18.04■□□□□ 0.48
UPK1AO00322 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC18.04■□□□□ 0.48
UPK1AO00322 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
UPK1AO00322 NOC2LP2-201ENST00000407594 1944 ntBASIC18.04■□□□□ 0.48
UPK1AO00322 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
UPK1AO00322 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
UPK1AO00322 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC18.04■□□□□ 0.48
UPK1AO00322 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
UPK1AO00322 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
UPK1AO00322 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
UPK1AO00322 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC18.04■□□□□ 0.48
UPK1AO00322 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC18.04■□□□□ 0.48
UPK1AO00322 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC18.04■□□□□ 0.48
UPK1AO00322 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
UPK1AO00322 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC18.04■□□□□ 0.48
UPK1AO00322 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC18.04■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 19.4 ms