Protein–RNA interactions for Protein: E9PAV3

NACA, Nascent polypeptide-associated complex subunit alpha, muscle-specific form, humanhuman

Predictions only

Length 2,078 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NACAE9PAV3 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
NACAE9PAV3 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
NACAE9PAV3 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC13.91□□□□□ -0.18
NACAE9PAV3 AL049812.1-201ENST00000432563 2267 ntBASIC13.91□□□□□ -0.18
NACAE9PAV3 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC13.91□□□□□ -0.18
NACAE9PAV3 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC13.91□□□□□ -0.18
NACAE9PAV3 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC13.91□□□□□ -0.18
NACAE9PAV3 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC13.91□□□□□ -0.18
NACAE9PAV3 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC13.91□□□□□ -0.18
NACAE9PAV3 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
NACAE9PAV3 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
NACAE9PAV3 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
NACAE9PAV3 REPS2-201ENST00000303843 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
NACAE9PAV3 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC13.91□□□□□ -0.18
NACAE9PAV3 PEX7-202ENST00000367756 680 ntTSL 3 BASIC13.91□□□□□ -0.18
NACAE9PAV3 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
NACAE9PAV3 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
NACAE9PAV3 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC13.91□□□□□ -0.18
NACAE9PAV3 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC13.91□□□□□ -0.18
NACAE9PAV3 AC120498.8-201ENST00000614275 531 ntBASIC13.91□□□□□ -0.18
NACAE9PAV3 AC006557.6-201ENST00000623071 864 ntBASIC13.91□□□□□ -0.18
NACAE9PAV3 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
NACAE9PAV3 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC13.9□□□□□ -0.18
NACAE9PAV3 CDH23-201ENST00000224721 11139 ntAPPRIS P5 TSL 5 BASIC13.9□□□□□ -0.18
NACAE9PAV3 CDH23-214ENST00000622827 11122 ntAPPRIS ALT1 TSL 5 BASIC13.9□□□□□ -0.18
NACAE9PAV3 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC13.9□□□□□ -0.18
NACAE9PAV3 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
NACAE9PAV3 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
NACAE9PAV3 LINC01465-201ENST00000408887 1940 ntBASIC13.9□□□□□ -0.18
NACAE9PAV3 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC13.9□□□□□ -0.18
NACAE9PAV3 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC13.9□□□□□ -0.18
NACAE9PAV3 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC13.9□□□□□ -0.18
NACAE9PAV3 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
NACAE9PAV3 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
NACAE9PAV3 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
NACAE9PAV3 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
NACAE9PAV3 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC13.9□□□□□ -0.18
NACAE9PAV3 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC13.9□□□□□ -0.18
NACAE9PAV3 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC13.9□□□□□ -0.18
NACAE9PAV3 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC13.9□□□□□ -0.18
NACAE9PAV3 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC13.9□□□□□ -0.18
NACAE9PAV3 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC13.9□□□□□ -0.18
NACAE9PAV3 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
NACAE9PAV3 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC13.9□□□□□ -0.18
NACAE9PAV3 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC13.9□□□□□ -0.18
NACAE9PAV3 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
NACAE9PAV3 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC13.9□□□□□ -0.18
NACAE9PAV3 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
NACAE9PAV3 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC13.9□□□□□ -0.18
NACAE9PAV3 TEX21P-204ENST00000641479 1693 ntBASIC13.9□□□□□ -0.18
NACAE9PAV3 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
NACAE9PAV3 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC13.9□□□□□ -0.19
NACAE9PAV3 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.19
NACAE9PAV3 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
NACAE9PAV3 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
NACAE9PAV3 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
NACAE9PAV3 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
NACAE9PAV3 MFF-205ENST00000354503 1085 ntTSL 2 BASIC13.89□□□□□ -0.19
NACAE9PAV3 CALM3-202ENST00000391918 702 ntTSL 2 BASIC13.89□□□□□ -0.19
NACAE9PAV3 AL390719.1-204ENST00000412397 1219 ntBASIC13.89□□□□□ -0.19
NACAE9PAV3 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
NACAE9PAV3 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC13.89□□□□□ -0.19
NACAE9PAV3 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC13.89□□□□□ -0.19
NACAE9PAV3 MTDHP1-201ENST00000605323 784 ntBASIC13.89□□□□□ -0.19
NACAE9PAV3 SH3BP2-207ENST00000503393 9158 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
NACAE9PAV3 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
NACAE9PAV3 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
NACAE9PAV3 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
NACAE9PAV3 NDFIP1-201ENST00000253814 3851 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
NACAE9PAV3 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
NACAE9PAV3 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
NACAE9PAV3 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
NACAE9PAV3 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
NACAE9PAV3 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
NACAE9PAV3 EML3-217ENST00000531557 2509 ntTSL 5 BASIC13.89□□□□□ -0.19
NACAE9PAV3 PKDREJ-201ENST00000253255 7693 ntAPPRIS P1 BASIC13.89□□□□□ -0.19
NACAE9PAV3 CHST11-201ENST00000303694 5709 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
NACAE9PAV3 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
NACAE9PAV3 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
NACAE9PAV3 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC13.89□□□□□ -0.19
NACAE9PAV3 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
NACAE9PAV3 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
NACAE9PAV3 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
NACAE9PAV3 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
NACAE9PAV3 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
NACAE9PAV3 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC13.89□□□□□ -0.19
NACAE9PAV3 KRT8P8-201ENST00000434750 1448 ntBASIC13.89□□□□□ -0.19
NACAE9PAV3 KCNB1-203ENST00000635465 4114 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
NACAE9PAV3 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC13.89□□□□□ -0.19
NACAE9PAV3 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC13.89□□□□□ -0.19
NACAE9PAV3 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC13.89□□□□□ -0.19
NACAE9PAV3 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC13.89□□□□□ -0.19
NACAE9PAV3 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
NACAE9PAV3 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
NACAE9PAV3 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC13.89□□□□□ -0.19
NACAE9PAV3 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
NACAE9PAV3 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC13.88□□□□□ -0.19
NACAE9PAV3 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
NACAE9PAV3 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
NACAE9PAV3 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 37 ms