Protein–RNA interactions for Protein: A6NNM3

RIMBP3B, RIMS-binding protein 3B, humanhuman

Predictions only

Length 1,639 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIMBP3BA6NNM3 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC30.33■■■□□ 2.45
RIMBP3BA6NNM3 AC023274.1-201ENST00000418278 595 ntBASIC30.33■■■□□ 2.45
RIMBP3BA6NNM3 MPIG6B-210ENST00000480039 790 ntAPPRIS ALT2 TSL 1 (best) BASIC30.33■■■□□ 2.45
RIMBP3BA6NNM3 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC30.32■■■□□ 2.45
RIMBP3BA6NNM3 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC30.32■■■□□ 2.44
RIMBP3BA6NNM3 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC30.32■■■□□ 2.44
RIMBP3BA6NNM3 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC30.32■■■□□ 2.44
RIMBP3BA6NNM3 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC30.32■■■□□ 2.44
RIMBP3BA6NNM3 ZBTB45-205ENST00000600990 2159 ntAPPRIS P1 TSL 5 BASIC30.32■■■□□ 2.44
RIMBP3BA6NNM3 TMEM256-PLSCR3-204ENST00000573331 2557 ntAPPRIS P5 TSL 2 BASIC30.32■■■□□ 2.44
RIMBP3BA6NNM3 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC30.32■■■□□ 2.44
RIMBP3BA6NNM3 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC30.32■■■□□ 2.44
RIMBP3BA6NNM3 AL451067.1-201ENST00000453111 394 ntTSL 2 BASIC30.32■■■□□ 2.44
RIMBP3BA6NNM3 MTDHP5-201ENST00000598980 586 ntBASIC30.32■■■□□ 2.44
RIMBP3BA6NNM3 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC30.32■■■□□ 2.44
RIMBP3BA6NNM3 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC30.32■■■□□ 2.44
RIMBP3BA6NNM3 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC30.31■■■□□ 2.44
RIMBP3BA6NNM3 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC30.31■■■□□ 2.44
RIMBP3BA6NNM3 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC30.31■■■□□ 2.44
RIMBP3BA6NNM3 PAN3-AS1-201ENST00000563843 1351 ntBASIC30.31■■■□□ 2.44
RIMBP3BA6NNM3 RPS2P28-201ENST00000314255 741 ntBASIC30.31■■■□□ 2.44
RIMBP3BA6NNM3 BAX-203ENST00000354470 433 ntTSL 1 (best) BASIC30.31■■■□□ 2.44
RIMBP3BA6NNM3 PSMB8-202ENST00000374882 1124 ntAPPRIS P1 TSL 1 (best) BASIC30.31■■■□□ 2.44
RIMBP3BA6NNM3 BAX-206ENST00000415969 540 ntTSL 1 (best) BASIC30.31■■■□□ 2.44
RIMBP3BA6NNM3 RBM17P3-201ENST00000417687 1192 ntBASIC30.31■■■□□ 2.44
RIMBP3BA6NNM3 RNASE10-202ENST00000430083 1172 ntTSL 2 BASIC30.31■■■□□ 2.44
RIMBP3BA6NNM3 CCDC74BP1-201ENST00000508880 1123 ntBASIC30.31■■■□□ 2.44
RIMBP3BA6NNM3 RTBDN-213ENST00000592204 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC30.31■■■□□ 2.44
RIMBP3BA6NNM3 AC098484.3-202ENST00000603943 1011 ntAPPRIS P5 TSL 5 BASIC30.31■■■□□ 2.44
RIMBP3BA6NNM3 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC30.31■■■□□ 2.44
RIMBP3BA6NNM3 ZDHHC4-206ENST00000405731 1348 ntAPPRIS P1 TSL 1 (best) BASIC30.31■■■□□ 2.44
RIMBP3BA6NNM3 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC30.3■■■□□ 2.44
RIMBP3BA6NNM3 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC30.3■■■□□ 2.44
RIMBP3BA6NNM3 TECR-201ENST00000215567 1171 ntAPPRIS P1 TSL 1 (best) BASIC30.3■■■□□ 2.44
RIMBP3BA6NNM3 DGUOK-201ENST00000264093 1144 ntAPPRIS P1 TSL 1 (best) BASIC30.3■■■□□ 2.44
RIMBP3BA6NNM3 DGUOK-202ENST00000348222 880 ntTSL 2 BASIC30.3■■■□□ 2.44
RIMBP3BA6NNM3 FCGRT-210ENST00000596975 1054 ntTSL 5 BASIC30.3■■■□□ 2.44
RIMBP3BA6NNM3 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC30.3■■■□□ 2.44
RIMBP3BA6NNM3 DGUOK-208ENST00000629438 1029 ntTSL 1 (best) BASIC30.3■■■□□ 2.44
RIMBP3BA6NNM3 EMB-204ENST00000508934 1617 ntAPPRIS ALT2 TSL 5 BASIC30.3■■■□□ 2.44
RIMBP3BA6NNM3 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC30.3■■■□□ 2.44
RIMBP3BA6NNM3 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC30.3■■■□□ 2.44
RIMBP3BA6NNM3 IRF9-203ENST00000557894 1391 ntTSL 5 BASIC30.3■■■□□ 2.44
RIMBP3BA6NNM3 TEAD4-201ENST00000358409 1637 ntTSL 1 (best) BASIC30.29■■■□□ 2.44
RIMBP3BA6NNM3 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC30.29■■■□□ 2.44
RIMBP3BA6NNM3 AGTRAP-205ENST00000400895 786 ntTSL 2 BASIC30.29■■■□□ 2.44
RIMBP3BA6NNM3 AL023284.2-201ENST00000405850 579 ntBASIC30.29■■■□□ 2.44
RIMBP3BA6NNM3 LINC02123-201ENST00000514869 885 ntTSL 1 (best) BASIC30.29■■■□□ 2.44
RIMBP3BA6NNM3 RAB34-226ENST00000636772 1180 ntTSL 5 BASIC30.29■■■□□ 2.44
RIMBP3BA6NNM3 RER1-202ENST00000378512 1404 ntTSL 1 (best) BASIC30.29■■■□□ 2.44
RIMBP3BA6NNM3 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC30.29■■■□□ 2.44
RIMBP3BA6NNM3 SPTSSA-201ENST00000298130 2777 ntAPPRIS P1 TSL 1 (best) BASIC30.29■■■□□ 2.44
RIMBP3BA6NNM3 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC30.29■■■□□ 2.44
RIMBP3BA6NNM3 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC30.29■■■□□ 2.44
RIMBP3BA6NNM3 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC30.29■■■□□ 2.44
RIMBP3BA6NNM3 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC30.29■■■□□ 2.44
RIMBP3BA6NNM3 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC30.29■■■□□ 2.44
RIMBP3BA6NNM3 TMEM179B-201ENST00000333449 1023 ntAPPRIS P1 TSL 1 (best) BASIC30.29■■■□□ 2.44
RIMBP3BA6NNM3 AC005281.1-201ENST00000433040 911 ntTSL 5 BASIC30.29■■■□□ 2.44
RIMBP3BA6NNM3 AL449423.1-201ENST00000578935 435 ntTSL 3 BASIC30.29■■■□□ 2.44
RIMBP3BA6NNM3 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC30.28■■■□□ 2.44
RIMBP3BA6NNM3 ATP5G3-202ENST00000392541 842 ntAPPRIS P1 TSL 1 (best) BASIC30.28■■■□□ 2.44
RIMBP3BA6NNM3 LINC02242-201ENST00000507298 641 ntTSL 5 BASIC30.28■■■□□ 2.44
RIMBP3BA6NNM3 ELOF1-204ENST00000587806 1172 ntTSL 2 BASIC30.28■■■□□ 2.44
RIMBP3BA6NNM3 SWI5-206ENST00000608796 906 ntAPPRIS ALT2 TSL 1 (best) BASIC30.28■■■□□ 2.44
RIMBP3BA6NNM3 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC30.28■■■□□ 2.44
RIMBP3BA6NNM3 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC30.28■■■□□ 2.44
RIMBP3BA6NNM3 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC30.27■■■□□ 2.44
RIMBP3BA6NNM3 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC30.27■■■□□ 2.44
RIMBP3BA6NNM3 FCN2-201ENST00000291744 1057 ntAPPRIS P2 TSL 1 (best) BASIC30.27■■■□□ 2.44
RIMBP3BA6NNM3 ANKRD37-201ENST00000335174 1141 ntAPPRIS P1 TSL 1 (best) BASIC30.27■■■□□ 2.44
RIMBP3BA6NNM3 MFSD13A-202ENST00000369931 823 ntTSL 1 (best) BASIC30.27■■■□□ 2.44
RIMBP3BA6NNM3 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC30.27■■■□□ 2.44
RIMBP3BA6NNM3 AC004130.1-202ENST00000603156 666 ntTSL 2 BASIC30.27■■■□□ 2.44
RIMBP3BA6NNM3 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC30.27■■■□□ 2.44
RIMBP3BA6NNM3 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC30.27■■■□□ 2.44
RIMBP3BA6NNM3 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC30.27■■■□□ 2.44
RIMBP3BA6NNM3 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC30.27■■■□□ 2.44
RIMBP3BA6NNM3 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC30.26■■■□□ 2.44
RIMBP3BA6NNM3 FTMT-201ENST00000321339 879 ntAPPRIS P1 BASIC30.26■■■□□ 2.44
RIMBP3BA6NNM3 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC30.26■■■□□ 2.44
RIMBP3BA6NNM3 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC30.26■■■□□ 2.44
RIMBP3BA6NNM3 POM121L12-201ENST00000408890 1283 ntAPPRIS P1 BASIC30.26■■■□□ 2.44
RIMBP3BA6NNM3 CCNL2-202ENST00000408918 1186 ntTSL 1 (best) BASIC30.26■■■□□ 2.44
RIMBP3BA6NNM3 RPS2P1-201ENST00000434010 821 ntBASIC30.26■■■□□ 2.44
RIMBP3BA6NNM3 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC30.26■■■□□ 2.44
RIMBP3BA6NNM3 HEXIM2-207ENST00000592695 1246 ntAPPRIS P1 TSL 1 (best) BASIC30.26■■■□□ 2.44
RIMBP3BA6NNM3 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC30.26■■■□□ 2.43
RIMBP3BA6NNM3 CAMK2B-203ENST00000347193 1577 ntTSL 1 (best) BASIC30.26■■■□□ 2.43
RIMBP3BA6NNM3 POMC-204ENST00000405623 1426 ntAPPRIS P1 TSL 1 (best) BASIC30.26■■■□□ 2.43
RIMBP3BA6NNM3 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC30.26■■■□□ 2.43
RIMBP3BA6NNM3 APCDD1L-AS1-201ENST00000420279 555 ntTSL 5 BASIC30.25■■■□□ 2.43
RIMBP3BA6NNM3 AC132008.2-207ENST00000454517 770 ntBASIC30.25■■■□□ 2.43
RIMBP3BA6NNM3 AC021087.4-201ENST00000563761 564 ntBASIC30.25■■■□□ 2.43
RIMBP3BA6NNM3 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC30.25■■■□□ 2.43
RIMBP3BA6NNM3 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC30.25■■■□□ 2.43
RIMBP3BA6NNM3 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC30.25■■■□□ 2.43
RIMBP3BA6NNM3 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC30.25■■■□□ 2.43
RIMBP3BA6NNM3 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC30.25■■■□□ 2.43
RIMBP3BA6NNM3 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC30.25■■■□□ 2.43
Retrieved 100 of 98,524 protein–RNA pairs in 24.8 ms