Protein–RNA interactions for Protein: A2VCL2

CCDC162P, Coiled-coil domain-containing protein 162, humanhuman

Predictions only

Length 907 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC162PA2VCL2 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
CCDC162PA2VCL2 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CCDC162PA2VCL2 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
CCDC162PA2VCL2 SAPCD2P4-201ENST00000424595 1171 ntBASIC19.06■□□□□ 0.64
CCDC162PA2VCL2 UBE2SP1-201ENST00000450587 669 ntBASIC19.06■□□□□ 0.64
CCDC162PA2VCL2 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
CCDC162PA2VCL2 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC19.06■□□□□ 0.64
CCDC162PA2VCL2 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC19.06■□□□□ 0.64
CCDC162PA2VCL2 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
CCDC162PA2VCL2 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
CCDC162PA2VCL2 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
CCDC162PA2VCL2 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CCDC162PA2VCL2 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC19.06■□□□□ 0.64
CCDC162PA2VCL2 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CCDC162PA2VCL2 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC19.06■□□□□ 0.64
CCDC162PA2VCL2 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CCDC162PA2VCL2 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC19.06■□□□□ 0.64
CCDC162PA2VCL2 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC19.06■□□□□ 0.64
CCDC162PA2VCL2 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CCDC162PA2VCL2 AC006333.2-201ENST00000607957 2099 ntBASIC19.05■□□□□ 0.64
CCDC162PA2VCL2 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC19.05■□□□□ 0.64
CCDC162PA2VCL2 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CCDC162PA2VCL2 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
CCDC162PA2VCL2 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC19.05■□□□□ 0.64
CCDC162PA2VCL2 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC19.05■□□□□ 0.64
CCDC162PA2VCL2 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC19.05■□□□□ 0.64
CCDC162PA2VCL2 BSX-201ENST00000343035 830 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
CCDC162PA2VCL2 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
CCDC162PA2VCL2 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC19.05■□□□□ 0.64
CCDC162PA2VCL2 WDR34-201ENST00000372715 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CCDC162PA2VCL2 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CCDC162PA2VCL2 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
CCDC162PA2VCL2 RCC2P6-201ENST00000526625 1557 ntBASIC19.05■□□□□ 0.64
CCDC162PA2VCL2 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC19.05■□□□□ 0.64
CCDC162PA2VCL2 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CCDC162PA2VCL2 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CCDC162PA2VCL2 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC19.05■□□□□ 0.64
CCDC162PA2VCL2 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CCDC162PA2VCL2 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
CCDC162PA2VCL2 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC19.05■□□□□ 0.64
CCDC162PA2VCL2 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC19.05■□□□□ 0.64
CCDC162PA2VCL2 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CCDC162PA2VCL2 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CCDC162PA2VCL2 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC19.04■□□□□ 0.64
CCDC162PA2VCL2 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC19.04■□□□□ 0.64
CCDC162PA2VCL2 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC19.04■□□□□ 0.64
CCDC162PA2VCL2 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC19.04■□□□□ 0.64
CCDC162PA2VCL2 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC19.04■□□□□ 0.64
CCDC162PA2VCL2 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC19.04■□□□□ 0.64
CCDC162PA2VCL2 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
CCDC162PA2VCL2 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CCDC162PA2VCL2 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
CCDC162PA2VCL2 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CCDC162PA2VCL2 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
CCDC162PA2VCL2 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC19.04■□□□□ 0.64
CCDC162PA2VCL2 FAM197Y1-201ENST00000421178 764 ntBASIC19.04■□□□□ 0.64
CCDC162PA2VCL2 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC19.04■□□□□ 0.64
CCDC162PA2VCL2 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CCDC162PA2VCL2 AC091390.4-202ENST00000476426 537 ntBASIC19.04■□□□□ 0.64
CCDC162PA2VCL2 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC19.04■□□□□ 0.64
CCDC162PA2VCL2 AL135905.2-201ENST00000584934 1404 ntBASIC19.04■□□□□ 0.64
CCDC162PA2VCL2 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC19.04■□□□□ 0.64
CCDC162PA2VCL2 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC19.04■□□□□ 0.64
CCDC162PA2VCL2 AL031985.4-201ENST00000642138 673 ntBASIC19.04■□□□□ 0.64
CCDC162PA2VCL2 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC19.04■□□□□ 0.64
CCDC162PA2VCL2 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
CCDC162PA2VCL2 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC19.04■□□□□ 0.64
CCDC162PA2VCL2 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC19.04■□□□□ 0.64
CCDC162PA2VCL2 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CCDC162PA2VCL2 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
CCDC162PA2VCL2 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC19.04■□□□□ 0.64
CCDC162PA2VCL2 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
CCDC162PA2VCL2 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC19.03■□□□□ 0.64
CCDC162PA2VCL2 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
CCDC162PA2VCL2 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CCDC162PA2VCL2 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC19.03■□□□□ 0.64
CCDC162PA2VCL2 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC19.03■□□□□ 0.64
CCDC162PA2VCL2 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CCDC162PA2VCL2 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CCDC162PA2VCL2 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC19.03■□□□□ 0.64
CCDC162PA2VCL2 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CCDC162PA2VCL2 KRT8P11-201ENST00000409686 1436 ntBASIC19.03■□□□□ 0.64
CCDC162PA2VCL2 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
CCDC162PA2VCL2 AC093503.3-201ENST00000624917 2352 ntBASIC19.03■□□□□ 0.64
CCDC162PA2VCL2 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC19.03■□□□□ 0.64
CCDC162PA2VCL2 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CCDC162PA2VCL2 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
CCDC162PA2VCL2 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC19.03■□□□□ 0.64
CCDC162PA2VCL2 DERL1-203ENST00000419562 918 ntTSL 2 BASIC19.03■□□□□ 0.64
CCDC162PA2VCL2 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CCDC162PA2VCL2 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
CCDC162PA2VCL2 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC19.03■□□□□ 0.64
CCDC162PA2VCL2 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC19.03■□□□□ 0.64
CCDC162PA2VCL2 TMEM191A-211ENST00000637163 1067 ntBASIC19.03■□□□□ 0.64
CCDC162PA2VCL2 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CCDC162PA2VCL2 USP39-202ENST00000409025 1946 ntTSL 5 BASIC19.03■□□□□ 0.64
CCDC162PA2VCL2 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CCDC162PA2VCL2 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CCDC162PA2VCL2 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
CCDC162PA2VCL2 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 30.3 ms