Protein–RNA interactions for Protein: A0A087WT02

TRAV9-2, T-cell receptor alpha variable 9-2 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV9-2A0A087WT02 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
TRAV9-2A0A087WT02 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
TRAV9-2A0A087WT02 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
TRAV9-2A0A087WT02 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
TRAV9-2A0A087WT02 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
TRAV9-2A0A087WT02 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
TRAV9-2A0A087WT02 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC14.17□□□□□ -0.14
TRAV9-2A0A087WT02 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
TRAV9-2A0A087WT02 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
TRAV9-2A0A087WT02 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
TRAV9-2A0A087WT02 TLE2-219ENST00000591529 2483 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
TRAV9-2A0A087WT02 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
TRAV9-2A0A087WT02 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
TRAV9-2A0A087WT02 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
TRAV9-2A0A087WT02 CYTH2-204ENST00000452733 4780 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
TRAV9-2A0A087WT02 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
TRAV9-2A0A087WT02 CDCA4P2-201ENST00000441182 718 ntBASIC14.17□□□□□ -0.14
TRAV9-2A0A087WT02 CDV3P1-201ENST00000471403 739 ntBASIC14.17□□□□□ -0.14
TRAV9-2A0A087WT02 DUX4L16-201ENST00000555130 1264 ntBASIC14.17□□□□□ -0.14
TRAV9-2A0A087WT02 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC14.17□□□□□ -0.14
TRAV9-2A0A087WT02 AL591742.1-201ENST00000604433 565 ntBASIC14.17□□□□□ -0.14
TRAV9-2A0A087WT02 AC005181.1-201ENST00000604782 1256 ntBASIC14.17□□□□□ -0.14
TRAV9-2A0A087WT02 AC243732.1-201ENST00000612648 864 ntBASIC14.17□□□□□ -0.14
TRAV9-2A0A087WT02 NADSYN1-201ENST00000319023 2773 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
TRAV9-2A0A087WT02 PCK2-205ENST00000558096 2433 ntTSL 2 BASIC14.17□□□□□ -0.14
TRAV9-2A0A087WT02 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
TRAV9-2A0A087WT02 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC14.17□□□□□ -0.14
TRAV9-2A0A087WT02 WNK2-201ENST00000297954 7138 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
TRAV9-2A0A087WT02 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
TRAV9-2A0A087WT02 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
TRAV9-2A0A087WT02 TRPC1-201ENST00000273482 4324 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
TRAV9-2A0A087WT02 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC14.17□□□□□ -0.14
TRAV9-2A0A087WT02 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC14.17□□□□□ -0.14
TRAV9-2A0A087WT02 MYH14-202ENST00000376970 6787 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
TRAV9-2A0A087WT02 FAM135A-205ENST00000418814 6415 ntTSL 5 BASIC14.17□□□□□ -0.14
TRAV9-2A0A087WT02 GCH1-204ENST00000491895 2943 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
TRAV9-2A0A087WT02 AC061975.6-201ENST00000579045 1553 ntBASIC14.17□□□□□ -0.14
TRAV9-2A0A087WT02 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC14.17□□□□□ -0.14
TRAV9-2A0A087WT02 INPP5B-201ENST00000373021 3934 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
TRAV9-2A0A087WT02 JMY-201ENST00000396137 9042 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
TRAV9-2A0A087WT02 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC14.16□□□□□ -0.14
TRAV9-2A0A087WT02 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC14.16□□□□□ -0.14
TRAV9-2A0A087WT02 FBXL16-202ENST00000397621 3547 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
TRAV9-2A0A087WT02 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC14.16□□□□□ -0.14
TRAV9-2A0A087WT02 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
TRAV9-2A0A087WT02 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
TRAV9-2A0A087WT02 PTPRA-205ENST00000399903 3337 ntTSL 5 BASIC14.16□□□□□ -0.14
TRAV9-2A0A087WT02 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
TRAV9-2A0A087WT02 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
TRAV9-2A0A087WT02 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC14.16□□□□□ -0.14
TRAV9-2A0A087WT02 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
TRAV9-2A0A087WT02 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC14.16□□□□□ -0.14
TRAV9-2A0A087WT02 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC14.16□□□□□ -0.14
TRAV9-2A0A087WT02 AC007322.4-201ENST00000509611 723 ntBASIC14.16□□□□□ -0.14
TRAV9-2A0A087WT02 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC14.16□□□□□ -0.14
TRAV9-2A0A087WT02 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC14.16□□□□□ -0.14
TRAV9-2A0A087WT02 TK2-208ENST00000545043 1120 ntTSL 2 BASIC14.16□□□□□ -0.14
TRAV9-2A0A087WT02 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC14.16□□□□□ -0.14
TRAV9-2A0A087WT02 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC14.16□□□□□ -0.14
TRAV9-2A0A087WT02 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC14.16□□□□□ -0.14
TRAV9-2A0A087WT02 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
TRAV9-2A0A087WT02 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
TRAV9-2A0A087WT02 KIAA1586-201ENST00000370733 2933 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
TRAV9-2A0A087WT02 ADGRB2-201ENST00000373655 5400 ntAPPRIS P4 TSL 1 (best) BASIC14.16□□□□□ -0.14
TRAV9-2A0A087WT02 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
TRAV9-2A0A087WT02 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC14.16□□□□□ -0.14
TRAV9-2A0A087WT02 NR2C2-206ENST00000425241 2494 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
TRAV9-2A0A087WT02 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
TRAV9-2A0A087WT02 NINL-201ENST00000278886 4969 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
TRAV9-2A0A087WT02 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
TRAV9-2A0A087WT02 DAPK1-207ENST00000469640 5899 ntTSL 5 BASIC14.15□□□□□ -0.14
TRAV9-2A0A087WT02 YARS2-201ENST00000324868 2122 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
TRAV9-2A0A087WT02 ARHGEF28-214ENST00000545377 6351 ntAPPRIS P3 TSL 5 BASIC14.15□□□□□ -0.14
TRAV9-2A0A087WT02 SYT3-202ENST00000593901 2836 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
TRAV9-2A0A087WT02 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
TRAV9-2A0A087WT02 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
TRAV9-2A0A087WT02 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC14.15□□□□□ -0.14
TRAV9-2A0A087WT02 NPRL3-201ENST00000399953 2784 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
TRAV9-2A0A087WT02 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
TRAV9-2A0A087WT02 MTMR14-203ENST00000353332 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
TRAV9-2A0A087WT02 AC006333.2-201ENST00000607957 2099 ntBASIC14.15□□□□□ -0.14
TRAV9-2A0A087WT02 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC14.15□□□□□ -0.14
TRAV9-2A0A087WT02 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
TRAV9-2A0A087WT02 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC14.15□□□□□ -0.14
TRAV9-2A0A087WT02 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC14.15□□□□□ -0.14
TRAV9-2A0A087WT02 STAC-204ENST00000457375 1366 ntTSL 2 BASIC14.15□□□□□ -0.14
TRAV9-2A0A087WT02 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC14.15□□□□□ -0.14
TRAV9-2A0A087WT02 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
TRAV9-2A0A087WT02 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
TRAV9-2A0A087WT02 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC14.15□□□□□ -0.14
TRAV9-2A0A087WT02 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC14.15□□□□□ -0.14
TRAV9-2A0A087WT02 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
TRAV9-2A0A087WT02 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC14.15□□□□□ -0.14
TRAV9-2A0A087WT02 AL162412.1-201ENST00000567129 965 ntBASIC14.15□□□□□ -0.14
TRAV9-2A0A087WT02 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC14.15□□□□□ -0.14
TRAV9-2A0A087WT02 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC14.15□□□□□ -0.14
TRAV9-2A0A087WT02 AMFR-201ENST00000290649 3600 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
TRAV9-2A0A087WT02 RHOF-201ENST00000267205 3009 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
TRAV9-2A0A087WT02 DIP2A-205ENST00000466639 2711 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
TRAV9-2A0A087WT02 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC14.15□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 35.6 ms