Protein–RNA interactions for Protein: Q9NUP1

BLOC1S4, Biogenesis of lysosome-related organelles complex 1 subunit 4, humanhuman

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BLOC1S4Q9NUP1 ASNSP3-201ENST00000451989 1306 ntBASIC3.13□□□□□ -1.91
BLOC1S4Q9NUP1 CDC27P3-201ENST00000635418 1910 ntBASIC3.13□□□□□ -1.91
BLOC1S4Q9NUP1 CFHR4-204ENST00000608469 1601 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
BLOC1S4Q9NUP1 SPAG11A-202ENST00000326625 445 ntTSL 5 BASIC3.12□□□□□ -1.91
BLOC1S4Q9NUP1 MIR412-201ENST00000362142 91 ntBASIC3.12□□□□□ -1.91
BLOC1S4Q9NUP1 MIR147B-201ENST00000390185 80 ntBASIC3.12□□□□□ -1.91
BLOC1S4Q9NUP1 LINC02041-201ENST00000440726 246 ntTSL 5 BASIC3.12□□□□□ -1.91
BLOC1S4Q9NUP1 KATNBL1P3-201ENST00000443475 909 ntBASIC3.12□□□□□ -1.91
BLOC1S4Q9NUP1 LINC01683-201ENST00000443479 412 ntTSL 3 BASIC3.12□□□□□ -1.91
BLOC1S4Q9NUP1 LINC00571-203ENST00000454060 525 ntTSL 3 BASIC3.12□□□□□ -1.91
BLOC1S4Q9NUP1 AC004924.1-201ENST00000480160 781 ntBASIC3.12□□□□□ -1.91
BLOC1S4Q9NUP1 RPL23AP70-201ENST00000483361 460 ntBASIC3.12□□□□□ -1.91
BLOC1S4Q9NUP1 MEPE-206ENST00000511670 550 ntTSL 4 BASIC3.12□□□□□ -1.91
BLOC1S4Q9NUP1 MEF2C-AS1-208ENST00000512585 741 ntTSL 5 BASIC3.12□□□□□ -1.91
BLOC1S4Q9NUP1 AC108727.1-201ENST00000513802 393 ntTSL 2 BASIC3.12□□□□□ -1.91
BLOC1S4Q9NUP1 SCARNA17.1-201ENST00000516211 143 ntBASIC3.12□□□□□ -1.91
BLOC1S4Q9NUP1 SCARNA17.2-201ENST00000516334 143 ntBASIC3.12□□□□□ -1.91
BLOC1S4Q9NUP1 SNORA74D-201ENST00000516404 141 ntBASIC3.12□□□□□ -1.91
BLOC1S4Q9NUP1 AC113145.1-201ENST00000522408 412 ntTSL 5 BASIC3.12□□□□□ -1.91
BLOC1S4Q9NUP1 OR5BN1P-201ENST00000532955 829 ntBASIC3.12□□□□□ -1.91
BLOC1S4Q9NUP1 HPRT1P3-201ENST00000539521 576 ntBASIC3.12□□□□□ -1.91
BLOC1S4Q9NUP1 AC090049.1-201ENST00000551075 1011 ntTSL 3 BASIC3.12□□□□□ -1.91
BLOC1S4Q9NUP1 AC040904.1-201ENST00000590850 223 ntBASIC3.12□□□□□ -1.91
BLOC1S4Q9NUP1 AC091152.3-201ENST00000604227 325 ntBASIC3.12□□□□□ -1.91
BLOC1S4Q9NUP1 AL033523.1-201ENST00000605153 153 ntBASIC3.12□□□□□ -1.91
BLOC1S4Q9NUP1 SCARNA17.4-201ENST00000614296 143 ntBASIC3.12□□□□□ -1.91
BLOC1S4Q9NUP1 AL449363.1-201ENST00000617815 186 ntBASIC3.12□□□□□ -1.91
BLOC1S4Q9NUP1 DLEU1_1.1-201ENST00000618107 190 ntBASIC3.12□□□□□ -1.91
BLOC1S4Q9NUP1 AL161782.1-201ENST00000622930 586 ntTSL 3 BASIC3.12□□□□□ -1.91
BLOC1S4Q9NUP1 SEC23A-215ENST00000625395 261 ntTSL 5 BASIC3.12□□□□□ -1.91
BLOC1S4Q9NUP1 CBLL1-201ENST00000222597 2003 ntAPPRIS ALT1 TSL 1 (best) BASIC3.12□□□□□ -1.91
BLOC1S4Q9NUP1 EYS-204ENST00000370621 10485 ntAPPRIS ALT2 TSL 1 (best) BASIC3.11□□□□□ -1.91
BLOC1S4Q9NUP1 OR5T2-201ENST00000313264 1248 ntAPPRIS P2 BASIC3.11□□□□□ -1.91
BLOC1S4Q9NUP1 RNU6-461P-201ENST00000364195 107 ntBASIC3.11□□□□□ -1.91
BLOC1S4Q9NUP1 RNU6-1280P-201ENST00000365211 107 ntBASIC3.11□□□□□ -1.91
BLOC1S4Q9NUP1 MDM4-202ENST00000367180 547 ntTSL 3 BASIC3.11□□□□□ -1.91
BLOC1S4Q9NUP1 SET-203ENST00000372688 801 ntTSL 2 BASIC3.11□□□□□ -1.91
BLOC1S4Q9NUP1 RNU6-748P-201ENST00000384648 107 ntBASIC3.11□□□□□ -1.91
BLOC1S4Q9NUP1 UBE2V1P2-201ENST00000397758 440 ntBASIC3.11□□□□□ -1.91
BLOC1S4Q9NUP1 AL031121.1-201ENST00000406553 254 ntBASIC3.11□□□□□ -1.91
BLOC1S4Q9NUP1 RNU6-195P-201ENST00000411352 109 ntBASIC3.11□□□□□ -1.91
BLOC1S4Q9NUP1 AL355388.1-201ENST00000415726 401 ntTSL 2 BASIC3.11□□□□□ -1.91
BLOC1S4Q9NUP1 AL160275.3-201ENST00000423876 471 ntBASIC3.11□□□□□ -1.91
BLOC1S4Q9NUP1 RPL31P35-201ENST00000431058 377 ntBASIC3.11□□□□□ -1.91
BLOC1S4Q9NUP1 AL451164.2-201ENST00000445932 597 ntTSL 2 BASIC3.11□□□□□ -1.91
BLOC1S4Q9NUP1 AC233279.1-201ENST00000455300 423 ntBASIC3.11□□□□□ -1.91
BLOC1S4Q9NUP1 AC023194.1-201ENST00000493084 308 ntBASIC3.11□□□□□ -1.91
BLOC1S4Q9NUP1 ARL2BPP4-201ENST00000506854 471 ntBASIC3.11□□□□□ -1.91
BLOC1S4Q9NUP1 AC008700.1-202ENST00000513657 468 ntTSL 5 BASIC3.11□□□□□ -1.91
BLOC1S4Q9NUP1 VTRNA2-2P-201ENST00000516091 103 ntBASIC3.11□□□□□ -1.91
BLOC1S4Q9NUP1 AF117829.1-204ENST00000519854 284 ntTSL 3 BASIC3.11□□□□□ -1.91
BLOC1S4Q9NUP1 AP001646.1-201ENST00000527936 915 ntBASIC3.11□□□□□ -1.91
BLOC1S4Q9NUP1 HSPE1P20-201ENST00000538133 289 ntBASIC3.11□□□□□ -1.91
BLOC1S4Q9NUP1 LINC02345-201ENST00000557883 766 ntTSL 3 BASIC3.11□□□□□ -1.91
BLOC1S4Q9NUP1 AC234778.2-201ENST00000566241 354 ntBASIC3.11□□□□□ -1.91
BLOC1S4Q9NUP1 MIR548AC-201ENST00000585049 88 ntBASIC3.11□□□□□ -1.91
BLOC1S4Q9NUP1 LINC01905-202ENST00000588139 459 ntTSL 3 BASIC3.11□□□□□ -1.91
BLOC1S4Q9NUP1 AC078899.3-201ENST00000599065 212 ntBASIC3.11□□□□□ -1.91
BLOC1S4Q9NUP1 AL645944.1-201ENST00000603857 493 ntBASIC3.11□□□□□ -1.91
BLOC1S4Q9NUP1 AP000787.2-201ENST00000604432 568 ntBASIC3.11□□□□□ -1.91
BLOC1S4Q9NUP1 C9orf153-205ENST00000617985 333 ntAPPRIS ALT2 TSL 5 BASIC3.11□□□□□ -1.91
BLOC1S4Q9NUP1 AL157786.1-207ENST00000627771 695 ntBASIC3.11□□□□□ -1.91
BLOC1S4Q9NUP1 MIR7157-201ENST00000635801 60 ntBASIC3.11□□□□□ -1.91
BLOC1S4Q9NUP1 U6.114-201ENST00000636407 96 ntBASIC3.11□□□□□ -1.91
BLOC1S4Q9NUP1 HMHB1-202ENST00000638299 126 ntAPPRIS P2 TSL 1 (best) BASIC3.11□□□□□ -1.91
BLOC1S4Q9NUP1 MCF2-208ENST00000519895 3346 ntAPPRIS ALT2 TSL 2 BASIC3.11□□□□□ -1.91
BLOC1S4Q9NUP1 CREBRF-201ENST00000296953 7778 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
BLOC1S4Q9NUP1 LMBRD1-201ENST00000370570 2099 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
BLOC1S4Q9NUP1 SPAM1-206ENST00000460182 2154 ntAPPRIS ALT2 TSL 1 (best) BASIC3.1□□□□□ -1.91
BLOC1S4Q9NUP1 ZBED5-201ENST00000413761 2512 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
BLOC1S4Q9NUP1 RNU6-61P-201ENST00000365528 109 ntBASIC3.1□□□□□ -1.91
BLOC1S4Q9NUP1 DYNLT3P1-201ENST00000378574 347 ntBASIC3.1□□□□□ -1.91
BLOC1S4Q9NUP1 SNORA11.1-201ENST00000408133 129 ntBASIC3.1□□□□□ -1.91
BLOC1S4Q9NUP1 LINC00301-202ENST00000412599 772 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
BLOC1S4Q9NUP1 AC133104.1-201ENST00000429100 218 ntBASIC3.1□□□□□ -1.91
BLOC1S4Q9NUP1 MICF-203ENST00000432679 129 ntBASIC3.1□□□□□ -1.91
BLOC1S4Q9NUP1 MIR1302-2HG-201ENST00000469289 535 ntTSL 5 BASIC3.1□□□□□ -1.91
BLOC1S4Q9NUP1 EIF4EP3-201ENST00000498782 656 ntBASIC3.1□□□□□ -1.91
BLOC1S4Q9NUP1 TRIQK-207ENST00000519069 598 ntTSL 4 BASIC3.1□□□□□ -1.91
BLOC1S4Q9NUP1 AF117829.1-203ENST00000520306 421 ntTSL 5 BASIC3.1□□□□□ -1.91
BLOC1S4Q9NUP1 AL359237.1-201ENST00000554305 826 ntTSL 5 BASIC3.1□□□□□ -1.91
BLOC1S4Q9NUP1 AC074052.2-201ENST00000562516 214 ntTSL 3 BASIC3.1□□□□□ -1.91
BLOC1S4Q9NUP1 LINC02210-208ENST00000585118 546 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
BLOC1S4Q9NUP1 BNIP3P22-201ENST00000593399 556 ntBASIC3.1□□□□□ -1.91
BLOC1S4Q9NUP1 AC005000.2-201ENST00000605468 310 ntBASIC3.1□□□□□ -1.91
BLOC1S4Q9NUP1 AC006566.1-201ENST00000608943 513 ntBASIC3.1□□□□□ -1.91
BLOC1S4Q9NUP1 AC107871.2-201ENST00000612894 502 ntBASIC3.1□□□□□ -1.91
BLOC1S4Q9NUP1 NANOGNB-202ENST00000640040 824 ntAPPRIS ALT2 TSL 5 BASIC3.1□□□□□ -1.91
BLOC1S4Q9NUP1 RICTOR-201ENST00000296782 7505 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
BLOC1S4Q9NUP1 MIR133A1HG-202ENST00000581072 4226 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
BLOC1S4Q9NUP1 DPY19L2P1-203ENST00000458672 3347 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
BLOC1S4Q9NUP1 ERBIN-202ENST00000380935 6692 ntTSL 5 BASIC3.09□□□□□ -1.91
BLOC1S4Q9NUP1 RNU1-112P-201ENST00000364401 164 ntBASIC3.09□□□□□ -1.91
BLOC1S4Q9NUP1 CISD1P1-201ENST00000393907 327 ntBASIC3.09□□□□□ -1.91
BLOC1S4Q9NUP1 OR5H8-201ENST00000394191 1045 ntAPPRIS P1 BASIC3.09□□□□□ -1.91
BLOC1S4Q9NUP1 RPL21P75-201ENST00000396599 483 ntBASIC3.09□□□□□ -1.91
BLOC1S4Q9NUP1 RPL21P28-201ENST00000401418 483 ntBASIC3.09□□□□□ -1.91
BLOC1S4Q9NUP1 AL592114.1-201ENST00000403842 483 ntBASIC3.09□□□□□ -1.91
BLOC1S4Q9NUP1 OR51A5P-201ENST00000415429 942 ntBASIC3.09□□□□□ -1.91
BLOC1S4Q9NUP1 AC002456.1-201ENST00000415965 317 ntTSL 5 BASIC3.09□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 96.4 ms