Protein–RNA interactions for Protein: Q96FT9

IFT43, Intraflagellar transport protein 43 homolog, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFT43Q96FT9 AC025031.4-201ENST00000621248 3271 ntBASIC4.85□□□□□ -1.63
IFT43Q96FT9 VPS13D-213ENST00000613099 16245 ntAPPRIS ALT1 TSL 1 (best) BASIC4.85□□□□□ -1.63
IFT43Q96FT9 SYT14-204ENST00000472886 2966 ntAPPRIS P3 TSL 1 (best) BASIC4.85□□□□□ -1.63
IFT43Q96FT9 RNA5SP372-201ENST00000390836 115 ntBASIC4.85□□□□□ -1.63
IFT43Q96FT9 AL606753.1-201ENST00000427435 87 ntBASIC4.85□□□□□ -1.63
IFT43Q96FT9 AF230666.1-201ENST00000429151 786 ntTSL 2 BASIC4.85□□□□□ -1.63
IFT43Q96FT9 OR4C10P-201ENST00000434991 931 ntBASIC4.85□□□□□ -1.63
IFT43Q96FT9 AL161618.1-201ENST00000438738 761 ntTSL 5 BASIC4.85□□□□□ -1.63
IFT43Q96FT9 AL078601.1-201ENST00000444542 271 ntBASIC4.85□□□□□ -1.63
IFT43Q96FT9 Z99127.1-202ENST00000448686 526 ntTSL 2 BASIC4.85□□□□□ -1.63
IFT43Q96FT9 ANP32BP2-201ENST00000454525 545 ntBASIC4.85□□□□□ -1.63
IFT43Q96FT9 snoU13.24-201ENST00000458998 104 ntBASIC4.85□□□□□ -1.63
IFT43Q96FT9 AC008897.1-201ENST00000494006 347 ntBASIC4.85□□□□□ -1.63
IFT43Q96FT9 MRPS33-209ENST00000496958 688 ntAPPRIS P1 TSL 3 BASIC4.85□□□□□ -1.63
IFT43Q96FT9 HMGB1P22-201ENST00000505315 124 ntBASIC4.85□□□□□ -1.63
IFT43Q96FT9 ANXA2P1-201ENST00000505539 926 ntBASIC4.85□□□□□ -1.63
IFT43Q96FT9 RNU6-572P-201ENST00000516724 80 ntBASIC4.85□□□□□ -1.63
IFT43Q96FT9 SCARNA24.2-201ENST00000516968 130 ntBASIC4.85□□□□□ -1.63
IFT43Q96FT9 RNA5SP165-201ENST00000517142 115 ntBASIC4.85□□□□□ -1.63
IFT43Q96FT9 RNA5SP291-201ENST00000517222 105 ntBASIC4.85□□□□□ -1.63
IFT43Q96FT9 IGHVII-53-1-201ENST00000519538 255 ntBASIC4.85□□□□□ -1.63
IFT43Q96FT9 RN7SL690P-201ENST00000582087 240 ntBASIC4.85□□□□□ -1.63
IFT43Q96FT9 AC022726.1-201ENST00000587475 207 ntBASIC4.85□□□□□ -1.63
IFT43Q96FT9 LINC01533-205ENST00000593056 607 ntTSL 3 BASIC4.85□□□□□ -1.63
IFT43Q96FT9 Metazoa_SRP.193-201ENST00000622007 277 ntBASIC4.85□□□□□ -1.63
IFT43Q96FT9 AC140113.4-201ENST00000622087 222 ntBASIC4.85□□□□□ -1.63
IFT43Q96FT9 CYP19A1-201ENST00000396402 4417 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
IFT43Q96FT9 PREPL-205ENST00000409411 4725 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
IFT43Q96FT9 AC010132.3-201ENST00000442788 2430 ntAPPRIS P5 TSL 5 BASIC4.85□□□□□ -1.63
IFT43Q96FT9 AL359693.1-201ENST00000614959 2407 ntBASIC4.85□□□□□ -1.63
IFT43Q96FT9 ZNF700-202ENST00000482090 3113 ntAPPRIS ALT2 TSL 2 BASIC4.85□□□□□ -1.63
IFT43Q96FT9 ATF7IP2-202ENST00000356427 3463 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
IFT43Q96FT9 PPP1R9A-205ENST00000424654 4058 ntTSL 5 BASIC4.85□□□□□ -1.63
IFT43Q96FT9 LINC00276-202ENST00000418420 3503 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
IFT43Q96FT9 MS4A1-202ENST00000389939 3372 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
IFT43Q96FT9 KIF21A-201ENST00000361418 5044 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
IFT43Q96FT9 RNU1-32P-201ENST00000363937 159 ntBASIC4.84□□□□□ -1.63
IFT43Q96FT9 RNU6-336P-201ENST00000364891 107 ntBASIC4.84□□□□□ -1.63
IFT43Q96FT9 Y_RNA.541-201ENST00000384640 113 ntBASIC4.84□□□□□ -1.63
IFT43Q96FT9 MIR124-3-201ENST00000384866 87 ntBASIC4.84□□□□□ -1.63
IFT43Q96FT9 TRAV9-2-201ENST00000390441 394 ntAPPRIS P1 BASIC4.84□□□□□ -1.63
IFT43Q96FT9 U3.30-201ENST00000391308 210 ntBASIC4.84□□□□□ -1.63
IFT43Q96FT9 RPL27AP8-201ENST00000424277 446 ntBASIC4.84□□□□□ -1.63
IFT43Q96FT9 INTS6-AS1-201ENST00000434512 466 ntTSL 3 BASIC4.84□□□□□ -1.63
IFT43Q96FT9 LINC01757-201ENST00000435552 480 ntTSL 2 BASIC4.84□□□□□ -1.63
IFT43Q96FT9 CXorf51B-201ENST00000438525 436 ntAPPRIS P1 TSL 2 BASIC4.84□□□□□ -1.63
IFT43Q96FT9 LINC01032-201ENST00000451690 276 ntTSL 5 BASIC4.84□□□□□ -1.63
IFT43Q96FT9 KC877373.1-201ENST00000479066 408 ntBASIC4.84□□□□□ -1.63
IFT43Q96FT9 AC132825.2-201ENST00000483901 504 ntTSL 5 BASIC4.84□□□□□ -1.63
IFT43Q96FT9 RN7SKP276-201ENST00000516242 268 ntBASIC4.84□□□□□ -1.63
IFT43Q96FT9 RNU1-6P-201ENST00000516290 144 ntBASIC4.84□□□□□ -1.63
IFT43Q96FT9 RAB9BP1-201ENST00000519581 626 ntBASIC4.84□□□□□ -1.63
IFT43Q96FT9 AP002392.1-201ENST00000537692 208 ntBASIC4.84□□□□□ -1.63
IFT43Q96FT9 RPL21P7-201ENST00000557463 483 ntBASIC4.84□□□□□ -1.63
IFT43Q96FT9 AC093249.4-201ENST00000564755 259 ntBASIC4.84□□□□□ -1.63
IFT43Q96FT9 AC010620.2-201ENST00000600135 313 ntBASIC4.84□□□□□ -1.63
IFT43Q96FT9 SNRPGP15-201ENST00000600149 222 ntBASIC4.84□□□□□ -1.63
IFT43Q96FT9 AC015813.4-201ENST00000610469 179 ntBASIC4.84□□□□□ -1.63
IFT43Q96FT9 5S_rRNA.16-201ENST00000612928 119 ntBASIC4.84□□□□□ -1.63
IFT43Q96FT9 LINC00901.1-201ENST00000617252 152 ntBASIC4.84□□□□□ -1.63
IFT43Q96FT9 R3HDM1-203ENST00000409606 3673 ntAPPRIS ALT1 TSL 2 BASIC4.84□□□□□ -1.63
IFT43Q96FT9 KCNJ6-201ENST00000609713 19645 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
IFT43Q96FT9 KCNJ16-211ENST00000615244 4190 ntAPPRIS P1 TSL 4 BASIC4.84□□□□□ -1.64
IFT43Q96FT9 AL157396.1-201ENST00000630034 8444 ntTSL 1 (best) BASIC4.84□□□□□ -1.64
IFT43Q96FT9 R3HCC1L-205ENST00000612478 3337 ntTSL 5 BASIC4.84□□□□□ -1.64
IFT43Q96FT9 CYLD-212ENST00000568704 3292 ntTSL 5 BASIC4.84□□□□□ -1.64
IFT43Q96FT9 RACGAP1-202ENST00000427314 3229 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.64
IFT43Q96FT9 PLS3-209ENST00000539310 3037 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
IFT43Q96FT9 TLR8-201ENST00000218032 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC4.83□□□□□ -1.64
IFT43Q96FT9 TLR3-201ENST00000296795 6015 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
IFT43Q96FT9 ANKRD30A-202ENST00000374660 4762 ntAPPRIS ALT2 TSL 5 BASIC4.83□□□□□ -1.64
IFT43Q96FT9 AL445487.1-201ENST00000415694 1580 ntBASIC4.83□□□□□ -1.64
IFT43Q96FT9 METTL18-201ENST00000303469 1426 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
IFT43Q96FT9 LINC01187-201ENST00000506431 2314 ntTSL 5 BASIC4.83□□□□□ -1.64
IFT43Q96FT9 ZSCAN26-204ENST00000614088 2321 ntTSL 3 BASIC4.83□□□□□ -1.64
IFT43Q96FT9 Y_RNA.291-201ENST00000364886 113 ntBASIC4.83□□□□□ -1.64
IFT43Q96FT9 RNU6-741P-201ENST00000383889 107 ntBASIC4.83□□□□□ -1.64
IFT43Q96FT9 RNU6-125P-201ENST00000384505 107 ntBASIC4.83□□□□□ -1.64
IFT43Q96FT9 MIR195-201ENST00000385194 87 ntBASIC4.83□□□□□ -1.64
IFT43Q96FT9 PLCL2-AS1-201ENST00000414844 311 ntTSL 2 BASIC4.83□□□□□ -1.64
IFT43Q96FT9 RPL21P40-201ENST00000428586 483 ntBASIC4.83□□□□□ -1.64
IFT43Q96FT9 AL136369.1-201ENST00000437825 244 ntTSL 5 BASIC4.83□□□□□ -1.64
IFT43Q96FT9 AL590422.1-201ENST00000451829 364 ntTSL 3 BASIC4.83□□□□□ -1.64
IFT43Q96FT9 snoU109.2-201ENST00000459316 135 ntBASIC4.83□□□□□ -1.64
IFT43Q96FT9 AC010326.1-201ENST00000462726 602 ntBASIC4.83□□□□□ -1.64
IFT43Q96FT9 AC010469.1-201ENST00000463864 576 ntBASIC4.83□□□□□ -1.64
IFT43Q96FT9 ENSA-210ENST00000503241 574 ntTSL 3 BASIC4.83□□□□□ -1.64
IFT43Q96FT9 ABCA17P-206ENST00000512848 467 ntTSL 2 BASIC4.83□□□□□ -1.64
IFT43Q96FT9 TRAPPC2P2-201ENST00000517589 409 ntBASIC4.83□□□□□ -1.64
IFT43Q96FT9 AC083973.1-205ENST00000518994 601 ntTSL 2 BASIC4.83□□□□□ -1.64
IFT43Q96FT9 AC104002.1-201ENST00000557025 380 ntTSL 3 BASIC4.83□□□□□ -1.64
IFT43Q96FT9 AC090510.1-201ENST00000567456 425 ntTSL 3 BASIC4.83□□□□□ -1.64
IFT43Q96FT9 AC003687.1-201ENST00000578040 427 ntTSL 3 BASIC4.83□□□□□ -1.64
IFT43Q96FT9 MIR5699-201ENST00000578903 90 ntBASIC4.83□□□□□ -1.64
IFT43Q96FT9 LINC01630-204ENST00000582689 539 ntTSL 4 BASIC4.83□□□□□ -1.64
IFT43Q96FT9 AC060766.3-201ENST00000591442 263 ntBASIC4.83□□□□□ -1.64
IFT43Q96FT9 U2.14-201ENST00000615943 113 ntBASIC4.83□□□□□ -1.64
IFT43Q96FT9 AC240442.1-201ENST00000616055 283 ntBASIC4.83□□□□□ -1.64
IFT43Q96FT9 GYPB-216ENST00000638448 363 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
IFT43Q96FT9 CCDC82-201ENST00000278520 2941 ntAPPRIS P2 TSL 5 BASIC4.83□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 108.6 ms