Protein–RNA interactions for Protein: Q8TEJ3

SH3RF3, SH3 domain-containing RING finger protein 3, humanhuman

Predicted RBP Predictions only

Length 882 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH3RF3Q8TEJ3 AC116562.3-201ENST00000506136 177 ntBASIC4.2□□□□□ -1.74
SH3RF3Q8TEJ3 TXNP6-201ENST00000510190 310 ntBASIC4.2□□□□□ -1.74
SH3RF3Q8TEJ3 AC136777.1-201ENST00000517765 369 ntTSL 4 BASIC4.2□□□□□ -1.74
SH3RF3Q8TEJ3 MTND4P7-201ENST00000523876 130 ntBASIC4.2□□□□□ -1.74
SH3RF3Q8TEJ3 AC068587.5-201ENST00000528506 175 ntBASIC4.2□□□□□ -1.74
SH3RF3Q8TEJ3 OR4P1P-201ENST00000530808 1136 ntBASIC4.2□□□□□ -1.74
SH3RF3Q8TEJ3 AP000763.2-201ENST00000540641 163 ntBASIC4.2□□□□□ -1.74
SH3RF3Q8TEJ3 RPL21P12-201ENST00000559810 515 ntBASIC4.2□□□□□ -1.74
SH3RF3Q8TEJ3 AL360157.1-201ENST00000565962 87 ntBASIC4.2□□□□□ -1.74
SH3RF3Q8TEJ3 AC090772.1-201ENST00000583782 507 ntTSL 5 BASIC4.2□□□□□ -1.74
SH3RF3Q8TEJ3 AL138726.1-201ENST00000614873 333 ntBASIC4.2□□□□□ -1.74
SH3RF3Q8TEJ3 AP001486.3-201ENST00000615334 372 ntBASIC4.2□□□□□ -1.74
SH3RF3Q8TEJ3 AC011155.2-201ENST00000623202 216 ntBASIC4.2□□□□□ -1.74
SH3RF3Q8TEJ3 AP003355.3-201ENST00000623465 114 ntBASIC4.2□□□□□ -1.74
SH3RF3Q8TEJ3 MPP6-209ENST00000625307 126 ntTSL 5 BASIC4.2□□□□□ -1.74
SH3RF3Q8TEJ3 CKAP5-201ENST00000312055 6532 ntTSL 5 BASIC4.2□□□□□ -1.74
SH3RF3Q8TEJ3 C1orf112-203ENST00000413811 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC4.2□□□□□ -1.74
SH3RF3Q8TEJ3 RGPD4-201ENST00000408999 5464 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
SH3RF3Q8TEJ3 ATP2B1-203ENST00000393164 3127 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
SH3RF3Q8TEJ3 DNAJC10-201ENST00000264065 20129 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
SH3RF3Q8TEJ3 IGSF11-AS1-201ENST00000477009 1604 ntTSL 2 BASIC4.2□□□□□ -1.74
SH3RF3Q8TEJ3 ZNF734P-201ENST00000419494 1534 ntBASIC4.2□□□□□ -1.74
SH3RF3Q8TEJ3 EIF2A-201ENST00000273435 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC4.2□□□□□ -1.74
SH3RF3Q8TEJ3 OTUD4P1-201ENST00000237841 3067 ntBASIC4.2□□□□□ -1.74
SH3RF3Q8TEJ3 NCOA1-201ENST00000288599 6952 ntAPPRIS ALT2 TSL 1 (best) BASIC4.2□□□□□ -1.74
SH3RF3Q8TEJ3 MCF2-202ENST00000370573 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC4.19□□□□□ -1.74
SH3RF3Q8TEJ3 SNORD3E-201ENST00000362899 217 ntBASIC4.19□□□□□ -1.74
SH3RF3Q8TEJ3 Y_RNA.117-201ENST00000363294 101 ntBASIC4.19□□□□□ -1.74
SH3RF3Q8TEJ3 RNA5SP42-201ENST00000364278 115 ntBASIC4.19□□□□□ -1.74
SH3RF3Q8TEJ3 Y_RNA.389-201ENST00000383924 113 ntBASIC4.19□□□□□ -1.74
SH3RF3Q8TEJ3 HMGN2P8-201ENST00000391458 268 ntBASIC4.19□□□□□ -1.74
SH3RF3Q8TEJ3 AC017083.1-201ENST00000428093 483 ntBASIC4.19□□□□□ -1.74
SH3RF3Q8TEJ3 RPL23AP74-201ENST00000437246 471 ntBASIC4.19□□□□□ -1.74
SH3RF3Q8TEJ3 RPS3AP12-201ENST00000443616 753 ntBASIC4.19□□□□□ -1.74
SH3RF3Q8TEJ3 AL392103.1-201ENST00000447000 198 ntBASIC4.19□□□□□ -1.74
SH3RF3Q8TEJ3 MYCBP2-AS1-202ENST00000448470 333 ntTSL 3 BASIC4.19□□□□□ -1.74
SH3RF3Q8TEJ3 AC011998.3-201ENST00000457053 254 ntTSL 3 BASIC4.19□□□□□ -1.74
SH3RF3Q8TEJ3 AC084357.1-201ENST00000473404 255 ntBASIC4.19□□□□□ -1.74
SH3RF3Q8TEJ3 AC092451.1-201ENST00000480211 153 ntBASIC4.19□□□□□ -1.74
SH3RF3Q8TEJ3 AC078817.1-201ENST00000492623 435 ntBASIC4.19□□□□□ -1.74
SH3RF3Q8TEJ3 MRPL36-203ENST00000505818 595 ntAPPRIS P1 TSL 3 BASIC4.19□□□□□ -1.74
SH3RF3Q8TEJ3 MGC32805-203ENST00000506053 652 ntTSL 3 BASIC4.19□□□□□ -1.74
SH3RF3Q8TEJ3 AC096736.2-201ENST00000507972 175 ntTSL 3 BASIC4.19□□□□□ -1.74
SH3RF3Q8TEJ3 AC008526.1-201ENST00000509149 338 ntBASIC4.19□□□□□ -1.74
SH3RF3Q8TEJ3 RNU6-579P-201ENST00000516879 102 ntBASIC4.19□□□□□ -1.74
SH3RF3Q8TEJ3 UQCRB-202ENST00000517523 515 ntTSL 2 BASIC4.19□□□□□ -1.74
SH3RF3Q8TEJ3 IGKV2-26-201ENST00000518305 343 ntBASIC4.19□□□□□ -1.74
SH3RF3Q8TEJ3 AC008489.1-201ENST00000524271 483 ntBASIC4.19□□□□□ -1.74
SH3RF3Q8TEJ3 AC092470.1-201ENST00000546187 132 ntBASIC4.19□□□□□ -1.74
SH3RF3Q8TEJ3 SMG1P7-203ENST00000573141 619 ntTSL 2 BASIC4.19□□□□□ -1.74
SH3RF3Q8TEJ3 AL355812.1-201ENST00000603215 216 ntBASIC4.19□□□□□ -1.74
SH3RF3Q8TEJ3 AL355376.2-201ENST00000603866 267 ntTSL 5 BASIC4.19□□□□□ -1.74
SH3RF3Q8TEJ3 IGHV3-29-201ENST00000604817 344 ntBASIC4.19□□□□□ -1.74
SH3RF3Q8TEJ3 AC098479.1-201ENST00000609225 154 ntBASIC4.19□□□□□ -1.74
SH3RF3Q8TEJ3 DUSP12P1-201ENST00000612874 516 ntBASIC4.19□□□□□ -1.74
SH3RF3Q8TEJ3 MIR8058-201ENST00000615737 89 ntBASIC4.19□□□□□ -1.74
SH3RF3Q8TEJ3 AC091953.5-201ENST00000622919 233 ntBASIC4.19□□□□□ -1.74
SH3RF3Q8TEJ3 AL159972.1-201ENST00000625150 448 ntBASIC4.19□□□□□ -1.74
SH3RF3Q8TEJ3 TEX41-280ENST00000629185 591 ntTSL 5 BASIC4.19□□□□□ -1.74
SH3RF3Q8TEJ3 AC073073.2-201ENST00000609827 2578 ntBASIC4.19□□□□□ -1.74
SH3RF3Q8TEJ3 CLHC1-201ENST00000401408 2248 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
SH3RF3Q8TEJ3 SYNE2-204ENST00000358025 21842 ntAPPRIS P3 TSL 5 BASIC4.19□□□□□ -1.74
SH3RF3Q8TEJ3 RNF38-210ENST00000611646 5185 ntTSL 5 BASIC4.19□□□□□ -1.74
SH3RF3Q8TEJ3 PICALM-209ENST00000528398 2049 ntTSL 2 BASIC4.19□□□□□ -1.74
SH3RF3Q8TEJ3 ANGPTL1-202ENST00000367629 2289 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
SH3RF3Q8TEJ3 AC091812.1-201ENST00000432235 1948 ntBASIC4.19□□□□□ -1.74
SH3RF3Q8TEJ3 LUM-201ENST00000266718 3008 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
SH3RF3Q8TEJ3 C6orf10-205ENST00000527965 2076 ntAPPRIS ALT2 TSL 2 BASIC4.18□□□□□ -1.74
SH3RF3Q8TEJ3 DMD-230ENST00000620040 13746 ntAPPRIS ALT2 TSL 5 BASIC4.18□□□□□ -1.74
SH3RF3Q8TEJ3 XRCC4-205ENST00000511817 1636 ntAPPRIS P4 TSL 1 (best) BASIC4.18□□□□□ -1.74
SH3RF3Q8TEJ3 FER-202ENST00000438717 1531 ntTSL 2 BASIC4.18□□□□□ -1.74
SH3RF3Q8TEJ3 RNU6-82P-201ENST00000363970 107 ntBASIC4.18□□□□□ -1.74
SH3RF3Q8TEJ3 RNU6-593P-201ENST00000364716 112 ntBASIC4.18□□□□□ -1.74
SH3RF3Q8TEJ3 RNU1-115P-201ENST00000365329 160 ntBASIC4.18□□□□□ -1.74
SH3RF3Q8TEJ3 Y_RNA.473-201ENST00000384333 102 ntBASIC4.18□□□□□ -1.74
SH3RF3Q8TEJ3 Y_RNA.485-201ENST00000384395 102 ntBASIC4.18□□□□□ -1.74
SH3RF3Q8TEJ3 RNU6-33P-201ENST00000384793 107 ntBASIC4.18□□□□□ -1.74
SH3RF3Q8TEJ3 MIR491-201ENST00000384877 84 ntBASIC4.18□□□□□ -1.74
SH3RF3Q8TEJ3 U3.39-201ENST00000408569 239 ntBASIC4.18□□□□□ -1.74
SH3RF3Q8TEJ3 LINC01201-201ENST00000412420 294 ntTSL 3 BASIC4.18□□□□□ -1.74
SH3RF3Q8TEJ3 EI24P1-201ENST00000416584 867 ntBASIC4.18□□□□□ -1.74
SH3RF3Q8TEJ3 AL590783.1-201ENST00000424138 456 ntTSL 2 BASIC4.18□□□□□ -1.74
SH3RF3Q8TEJ3 AC244035.3-201ENST00000428399 271 ntTSL 2 BASIC4.18□□□□□ -1.74
SH3RF3Q8TEJ3 AC008080.3-201ENST00000440074 380 ntTSL 3 BASIC4.18□□□□□ -1.74
SH3RF3Q8TEJ3 HMGN2P21-201ENST00000447764 270 ntBASIC4.18□□□□□ -1.74
SH3RF3Q8TEJ3 SNRPFP3-201ENST00000457792 225 ntBASIC4.18□□□□□ -1.74
SH3RF3Q8TEJ3 GZMAP1-201ENST00000503054 631 ntBASIC4.18□□□□□ -1.74
SH3RF3Q8TEJ3 AC069360.1-201ENST00000503469 431 ntTSL 2 BASIC4.18□□□□□ -1.74
SH3RF3Q8TEJ3 HIGD1AP13-201ENST00000509878 289 ntBASIC4.18□□□□□ -1.74
SH3RF3Q8TEJ3 LINC02283-201ENST00000511634 474 ntTSL 3 BASIC4.18□□□□□ -1.74
SH3RF3Q8TEJ3 AC005798.1-201ENST00000513715 387 ntBASIC4.18□□□□□ -1.74
SH3RF3Q8TEJ3 RNU6-470P-201ENST00000515954 104 ntBASIC4.18□□□□□ -1.74
SH3RF3Q8TEJ3 RNU6-120P-201ENST00000516077 103 ntBASIC4.18□□□□□ -1.74
SH3RF3Q8TEJ3 GNAI2P1-201ENST00000541815 315 ntBASIC4.18□□□□□ -1.74
SH3RF3Q8TEJ3 AC007513.1-201ENST00000548740 379 ntTSL 3 BASIC4.18□□□□□ -1.74
SH3RF3Q8TEJ3 OR11H5P-201ENST00000554039 926 ntBASIC4.18□□□□□ -1.74
SH3RF3Q8TEJ3 AP005059.2-201ENST00000577527 578 ntTSL 3 BASIC4.18□□□□□ -1.74
SH3RF3Q8TEJ3 AC011518.1-202ENST00000592668 407 ntTSL 5 BASIC4.18□□□□□ -1.74
SH3RF3Q8TEJ3 AC068790.3-201ENST00000602988 553 ntBASIC4.18□□□□□ -1.74
SH3RF3Q8TEJ3 AD001527.1-201ENST00000604228 379 ntTSL 5 BASIC4.18□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 162.5 ms