Protein–RNA interactions for Protein: Q8TAU0

NKX2-3, Homeobox protein Nkx-2.3, humanhuman

Predictions only

Length 364 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-3Q8TAU0 AC007224.1-201ENST00000564410 144 ntBASIC5.68□□□□□ -1.5
NKX2-3Q8TAU0 LINC01206-214ENST00000610910 456 ntTSL 5 BASIC5.68□□□□□ -1.5
NKX2-3Q8TAU0 YWHAEP7-201ENST00000617508 639 ntTSL 3 BASIC5.68□□□□□ -1.5
NKX2-3Q8TAU0 SCARNA4-201ENST00000629045 128 ntBASIC5.68□□□□□ -1.5
NKX2-3Q8TAU0 VCAN-201ENST00000265077 12625 ntAPPRIS P3 TSL 1 (best) BASIC5.68□□□□□ -1.5
NKX2-3Q8TAU0 LMBRD1-201ENST00000370570 2099 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
NKX2-3Q8TAU0 NFKBIZ-203ENST00000394054 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC5.68□□□□□ -1.5
NKX2-3Q8TAU0 AC139769.1-204ENST00000472297 1931 ntBASIC5.68□□□□□ -1.5
NKX2-3Q8TAU0 USP28-213ENST00000544967 3498 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
NKX2-3Q8TAU0 CACNB4-221ENST00000636130 7748 ntTSL 5 BASIC5.68□□□□□ -1.5
NKX2-3Q8TAU0 SMNDC1-202ENST00000369603 4341 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
NKX2-3Q8TAU0 GAPVD1-206ENST00000394104 6737 ntTSL 2 BASIC5.67□□□□□ -1.5
NKX2-3Q8TAU0 OR10K1-203ENST00000641432 3775 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
NKX2-3Q8TAU0 CDH10-201ENST00000264463 3438 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
NKX2-3Q8TAU0 AL499616.1-201ENST00000415437 2633 ntTSL 2 BASIC5.67□□□□□ -1.5
NKX2-3Q8TAU0 TLK1-212ENST00000521943 2605 ntTSL 2 BASIC5.67□□□□□ -1.5
NKX2-3Q8TAU0 SEL1L2-202ENST00000378072 1892 ntTSL 2 BASIC5.67□□□□□ -1.5
NKX2-3Q8TAU0 SMG1P6-201ENST00000532337 2930 ntBASIC5.67□□□□□ -1.5
NKX2-3Q8TAU0 MAPK10-304ENST00000641341 3984 ntBASIC5.67□□□□□ -1.5
NKX2-3Q8TAU0 GABRG2-224ENST00000640574 3150 ntTSL 5 BASIC5.67□□□□□ -1.5
NKX2-3Q8TAU0 Y_RNA.172-201ENST00000363765 102 ntBASIC5.67□□□□□ -1.5
NKX2-3Q8TAU0 RNA5SP515-201ENST00000364570 118 ntBASIC5.67□□□□□ -1.5
NKX2-3Q8TAU0 MIR129-1-201ENST00000384972 72 ntBASIC5.67□□□□□ -1.5
NKX2-3Q8TAU0 PPP1R11P2-201ENST00000423543 382 ntBASIC5.67□□□□□ -1.5
NKX2-3Q8TAU0 RPL23AP1-201ENST00000428990 471 ntBASIC5.67□□□□□ -1.5
NKX2-3Q8TAU0 RPS20P1-201ENST00000434853 354 ntBASIC5.67□□□□□ -1.5
NKX2-3Q8TAU0 AL365295.1-201ENST00000454942 514 ntTSL 5 BASIC5.67□□□□□ -1.5
NKX2-3Q8TAU0 AC010618.1-201ENST00000469924 477 ntBASIC5.67□□□□□ -1.5
NKX2-3Q8TAU0 AC107027.2-201ENST00000512197 115 ntBASIC5.67□□□□□ -1.5
NKX2-3Q8TAU0 RNU5E-3P-201ENST00000515913 68 ntBASIC5.67□□□□□ -1.5
NKX2-3Q8TAU0 Y_RNA.712-201ENST00000517011 92 ntBASIC5.67□□□□□ -1.5
NKX2-3Q8TAU0 RNU6-1315P-201ENST00000517187 99 ntBASIC5.67□□□□□ -1.5
NKX2-3Q8TAU0 AC022616.8-201ENST00000533569 253 ntBASIC5.67□□□□□ -1.5
NKX2-3Q8TAU0 AP005271.1-201ENST00000582470 412 ntTSL 3 BASIC5.67□□□□□ -1.5
NKX2-3Q8TAU0 AL139395.1-201ENST00000603662 160 ntBASIC5.67□□□□□ -1.5
NKX2-3Q8TAU0 AC011603.4-201ENST00000611325 277 ntBASIC5.67□□□□□ -1.5
NKX2-3Q8TAU0 RMST_6.1-201ENST00000611980 203 ntBASIC5.67□□□□□ -1.5
NKX2-3Q8TAU0 AC019206.1-201ENST00000621938 425 ntBASIC5.67□□□□□ -1.5
NKX2-3Q8TAU0 RNF180-202ENST00000389100 4906 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
NKX2-3Q8TAU0 UGT2A1-203ENST00000503640 2595 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
NKX2-3Q8TAU0 PLCH1-201ENST00000334686 6128 ntAPPRIS P3 TSL 1 (best) BASIC5.67□□□□□ -1.5
NKX2-3Q8TAU0 PTPRD-202ENST00000356435 9472 ntAPPRIS P1 TSL 5 BASIC5.67□□□□□ -1.5
NKX2-3Q8TAU0 ZNF850-203ENST00000614887 7625 ntAPPRIS ALT2 TSL 1 (best) BASIC5.67□□□□□ -1.5
NKX2-3Q8TAU0 SPAM1-202ENST00000340011 2349 ntAPPRIS P4 TSL 1 (best) BASIC5.66□□□□□ -1.5
NKX2-3Q8TAU0 C6orf10-210ENST00000617061 1904 ntAPPRIS ALT2 TSL 5 BASIC5.66□□□□□ -1.5
NKX2-3Q8TAU0 NOSTRIN-206ENST00000444448 2537 ntTSL 5 BASIC5.66□□□□□ -1.5
NKX2-3Q8TAU0 SNORD115-32-201ENST00000364079 82 ntBASIC5.66□□□□□ -1.5
NKX2-3Q8TAU0 RNU6-384P-201ENST00000364900 104 ntBASIC5.66□□□□□ -1.5
NKX2-3Q8TAU0 RNU6-395P-201ENST00000365662 106 ntBASIC5.66□□□□□ -1.5
NKX2-3Q8TAU0 RNU1-82P-201ENST00000390851 165 ntBASIC5.66□□□□□ -1.5
NKX2-3Q8TAU0 RPS12P23-201ENST00000419579 400 ntBASIC5.66□□□□□ -1.5
NKX2-3Q8TAU0 ARHGEF7-AS1-201ENST00000435037 321 ntTSL 3 BASIC5.66□□□□□ -1.5
NKX2-3Q8TAU0 AC090774.1-201ENST00000435925 246 ntBASIC5.66□□□□□ -1.5
NKX2-3Q8TAU0 Y_RNA.797-201ENST00000515977 94 ntBASIC5.66□□□□□ -1.5
NKX2-3Q8TAU0 RNU6-1114P-201ENST00000516022 107 ntBASIC5.66□□□□□ -1.5
NKX2-3Q8TAU0 AC022790.1-201ENST00000522872 204 ntBASIC5.66□□□□□ -1.5
NKX2-3Q8TAU0 AC005476.1-201ENST00000554427 397 ntBASIC5.66□□□□□ -1.5
NKX2-3Q8TAU0 AC010928.2-201ENST00000588017 287 ntBASIC5.66□□□□□ -1.5
NKX2-3Q8TAU0 AC245748.3-201ENST00000588710 241 ntTSL 3 BASIC5.66□□□□□ -1.5
NKX2-3Q8TAU0 AC006504.5-204ENST00000592404 765 ntTSL 3 BASIC5.66□□□□□ -1.5
NKX2-3Q8TAU0 FAM27B-201ENST00000610601 213 ntBASIC5.66□□□□□ -1.5
NKX2-3Q8TAU0 NHSL2-204ENST00000631375 12593 ntTSL 5 BASIC5.66□□□□□ -1.5
NKX2-3Q8TAU0 INO80D-201ENST00000403263 14136 ntAPPRIS P1 TSL 5 BASIC5.66□□□□□ -1.5
NKX2-3Q8TAU0 ATP2C1-210ENST00000505330 4888 ntAPPRIS ALT2 TSL 2 BASIC5.66□□□□□ -1.5
NKX2-3Q8TAU0 MAPK10-208ENST00000395169 4049 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
NKX2-3Q8TAU0 CDC23-202ENST00000394886 3155 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
NKX2-3Q8TAU0 ATP2C1-205ENST00000504381 3498 ntTSL 2 BASIC5.65□□□□□ -1.5
NKX2-3Q8TAU0 CTSS-201ENST00000368985 4107 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
NKX2-3Q8TAU0 SCN1A-209ENST00000635750 8299 ntAPPRIS P3 TSL 5 BASIC5.65□□□□□ -1.5
NKX2-3Q8TAU0 PLEKHG7-201ENST00000344636 3868 ntTSL 5 BASIC5.65□□□□□ -1.5
NKX2-3Q8TAU0 STIL-204ENST00000396221 4558 ntAPPRIS ALT2 TSL 1 (best) BASIC5.65□□□□□ -1.5
NKX2-3Q8TAU0 ARFGEF2-201ENST00000371917 8852 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
NKX2-3Q8TAU0 MTX3-204ENST00000617335 6155 ntTSL 2 BASIC5.65□□□□□ -1.5
NKX2-3Q8TAU0 PCDH15-211ENST00000395440 3177 ntTSL 5 BASIC5.65□□□□□ -1.5
NKX2-3Q8TAU0 RNU6-199P-201ENST00000362954 107 ntBASIC5.65□□□□□ -1.5
NKX2-3Q8TAU0 RNU6-213P-201ENST00000384051 104 ntBASIC5.65□□□□□ -1.5
NKX2-3Q8TAU0 MIR301A-201ENST00000385261 86 ntBASIC5.65□□□□□ -1.5
NKX2-3Q8TAU0 AL353743.2-202ENST00000439544 473 ntTSL 3 BASIC5.65□□□□□ -1.5
NKX2-3Q8TAU0 KIAA0895-209ENST00000453212 956 ntTSL 3 BASIC5.65□□□□□ -1.5
NKX2-3Q8TAU0 AC104164.2-201ENST00000496953 495 ntBASIC5.65□□□□□ -1.5
NKX2-3Q8TAU0 AC008869.1-201ENST00000510938 442 ntTSL 2 BASIC5.65□□□□□ -1.5
NKX2-3Q8TAU0 APOOP4-201ENST00000513530 597 ntBASIC5.65□□□□□ -1.5
NKX2-3Q8TAU0 RN7SKP272-201ENST00000516988 232 ntBASIC5.65□□□□□ -1.5
NKX2-3Q8TAU0 AC002428.2-201ENST00000522973 414 ntTSL 3 BASIC5.65□□□□□ -1.5
NKX2-3Q8TAU0 SNHG1-218ENST00000541615 748 ntTSL 5 BASIC5.65□□□□□ -1.5
NKX2-3Q8TAU0 MAPK1-204ENST00000544786 951 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
NKX2-3Q8TAU0 AL157871.3-201ENST00000557231 293 ntBASIC5.65□□□□□ -1.5
NKX2-3Q8TAU0 CYCSP40-201ENST00000575927 294 ntBASIC5.65□□□□□ -1.5
NKX2-3Q8TAU0 AL121932.1-201ENST00000605542 214 ntBASIC5.65□□□□□ -1.5
NKX2-3Q8TAU0 MIR6853-201ENST00000619642 74 ntBASIC5.65□□□□□ -1.5
NKX2-3Q8TAU0 AC011944.2-201ENST00000624440 683 ntBASIC5.65□□□□□ -1.5
NKX2-3Q8TAU0 LINC01002-215ENST00000632203 314 ntTSL 5 BASIC5.65□□□□□ -1.5
NKX2-3Q8TAU0 ATP2C1-212ENST00000507488 3579 ntAPPRIS ALT2 TSL 2 BASIC5.65□□□□□ -1.51
NKX2-3Q8TAU0 ZNF204P-201ENST00000416749 2397 ntBASIC5.65□□□□□ -1.51
NKX2-3Q8TAU0 HELLS-201ENST00000239026 2740 ntTSL 5 BASIC5.65□□□□□ -1.51
NKX2-3Q8TAU0 RYR3-201ENST00000389232 15552 ntAPPRIS ALT2 TSL 5 BASIC5.65□□□□□ -1.51
NKX2-3Q8TAU0 UGT8-202ENST00000394511 2448 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
NKX2-3Q8TAU0 KMT2D-201ENST00000301067 19419 ntAPPRIS P1 TSL 5 BASIC5.65□□□□□ -1.51
NKX2-3Q8TAU0 AC092593.1-201ENST00000515413 1815 ntBASIC5.64□□□□□ -1.51
NKX2-3Q8TAU0 EMSY-204ENST00000524490 4015 ntTSL 2 BASIC5.64□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 108.8 ms