Protein–RNA interactions for Protein: Q8NFH3

NUP43, Nucleoporin Nup43, humanhuman

Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP43Q8NFH3 QSER1-201ENST00000399302 9335 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
NUP43Q8NFH3 PHF20L1-210ENST00000395390 5900 ntTSL 5 BASIC4.07□□□□□ -1.76
NUP43Q8NFH3 RLIMP1-201ENST00000339626 1680 ntBASIC4.07□□□□□ -1.76
NUP43Q8NFH3 AC021355.1-202ENST00000519996 1633 ntTSL 2 BASIC4.07□□□□□ -1.76
NUP43Q8NFH3 MPDZ-215ENST00000541718 7603 ntAPPRIS P3 TSL 1 (best) BASIC4.07□□□□□ -1.76
NUP43Q8NFH3 G2E3-201ENST00000206595 5804 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
NUP43Q8NFH3 SEC31A-203ENST00000348405 4012 ntAPPRIS ALT2 TSL 1 (best) BASIC4.07□□□□□ -1.76
NUP43Q8NFH3 RNU1-76P-201ENST00000362903 159 ntBASIC4.07□□□□□ -1.76
NUP43Q8NFH3 LY6G5C-210ENST00000383237 674 ntAPPRIS P2 TSL 1 (best) BASIC4.07□□□□□ -1.76
NUP43Q8NFH3 MIR23A-201ENST00000385245 73 ntBASIC4.07□□□□□ -1.76
NUP43Q8NFH3 RNU2-33P-201ENST00000410344 192 ntBASIC4.07□□□□□ -1.76
NUP43Q8NFH3 RNA5SP494-201ENST00000410653 129 ntBASIC4.07□□□□□ -1.76
NUP43Q8NFH3 RNU2-25P-201ENST00000411041 191 ntBASIC4.07□□□□□ -1.76
NUP43Q8NFH3 Z85995.1-201ENST00000415547 335 ntBASIC4.07□□□□□ -1.76
NUP43Q8NFH3 AL356387.2-201ENST00000422272 243 ntBASIC4.07□□□□□ -1.76
NUP43Q8NFH3 RPL23AP1-201ENST00000428990 471 ntBASIC4.07□□□□□ -1.76
NUP43Q8NFH3 AC011998.1-201ENST00000433403 117 ntBASIC4.07□□□□□ -1.76
NUP43Q8NFH3 AC079354.2-201ENST00000453523 154 ntBASIC4.07□□□□□ -1.76
NUP43Q8NFH3 LINC02110-201ENST00000503870 546 ntTSL 3 BASIC4.07□□□□□ -1.76
NUP43Q8NFH3 AC015795.1-201ENST00000513669 327 ntBASIC4.07□□□□□ -1.76
NUP43Q8NFH3 IGLVIV-65-201ENST00000517313 360 ntBASIC4.07□□□□□ -1.76
NUP43Q8NFH3 MAL2-206ENST00000522187 547 ntTSL 4 BASIC4.07□□□□□ -1.76
NUP43Q8NFH3 AL355095.1-201ENST00000554451 539 ntTSL 2 BASIC4.07□□□□□ -1.76
NUP43Q8NFH3 AL359232.1-201ENST00000556361 442 ntTSL 3 BASIC4.07□□□□□ -1.76
NUP43Q8NFH3 AC069029.1-201ENST00000558736 263 ntTSL 2 BASIC4.07□□□□□ -1.76
NUP43Q8NFH3 NUDT7-203ENST00000563839 316 ntTSL 3 BASIC4.07□□□□□ -1.76
NUP43Q8NFH3 AC006557.5-201ENST00000603126 811 ntBASIC4.07□□□□□ -1.76
NUP43Q8NFH3 MIR7154-201ENST00000620673 73 ntBASIC4.07□□□□□ -1.76
NUP43Q8NFH3 DCUN1D1-208ENST00000632685 3147 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
NUP43Q8NFH3 RASA1-205ENST00000512763 3060 ntAPPRIS ALT2 TSL 2 BASIC4.07□□□□□ -1.76
NUP43Q8NFH3 C8orf34-202ENST00000337103 3652 ntAPPRIS ALT2 TSL 1 (best) BASIC4.07□□□□□ -1.76
NUP43Q8NFH3 CNTN6-205ENST00000446702 4513 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
NUP43Q8NFH3 MRE11-202ENST00000323977 2588 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
NUP43Q8NFH3 PRKAA2-202ENST00000610361 9280 ntAPPRIS ALT1 TSL 5 BASIC4.06□□□□□ -1.76
NUP43Q8NFH3 BCLAF1-214ENST00000531224 7263 ntAPPRIS P3 TSL 1 (best) BASIC4.06□□□□□ -1.76
NUP43Q8NFH3 AC004803.1-201ENST00000503602 3207 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
NUP43Q8NFH3 OR8D1-203ENST00000641897 8285 ntAPPRIS P1 BASIC4.06□□□□□ -1.76
NUP43Q8NFH3 AL158064.1-201ENST00000627044 2242 ntTSL 4 BASIC4.06□□□□□ -1.76
NUP43Q8NFH3 PCDH15-203ENST00000373955 4230 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
NUP43Q8NFH3 AP1G1-207ENST00000564155 2723 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
NUP43Q8NFH3 AC126755.2-208ENST00000327792 462 ntBASIC4.06□□□□□ -1.76
NUP43Q8NFH3 AC138969.1-213ENST00000331436 462 ntBASIC4.06□□□□□ -1.76
NUP43Q8NFH3 Y_RNA.84-201ENST00000363011 104 ntBASIC4.06□□□□□ -1.76
NUP43Q8NFH3 U3.6-201ENST00000363622 211 ntBASIC4.06□□□□□ -1.76
NUP43Q8NFH3 RNU6-173P-201ENST00000364215 104 ntBASIC4.06□□□□□ -1.76
NUP43Q8NFH3 RNA5SP175-201ENST00000364275 119 ntBASIC4.06□□□□□ -1.76
NUP43Q8NFH3 Y_RNA.416-201ENST00000384014 113 ntBASIC4.06□□□□□ -1.76
NUP43Q8NFH3 Y_RNA.539-201ENST00000384635 107 ntBASIC4.06□□□□□ -1.76
NUP43Q8NFH3 MIR129-1-201ENST00000384972 72 ntBASIC4.06□□□□□ -1.76
NUP43Q8NFH3 TRAV7-201ENST00000390429 337 ntAPPRIS P1 BASIC4.06□□□□□ -1.76
NUP43Q8NFH3 TRAJ34-201ENST00000390503 58 ntAPPRIS P1 BASIC4.06□□□□□ -1.76
NUP43Q8NFH3 AL022722.2-201ENST00000402519 180 ntBASIC4.06□□□□□ -1.76
NUP43Q8NFH3 MORN2-203ENST00000409131 544 ntTSL 5 BASIC4.06□□□□□ -1.76
NUP43Q8NFH3 RNU6-1203P-201ENST00000410703 110 ntBASIC4.06□□□□□ -1.76
NUP43Q8NFH3 AC051618.1-201ENST00000414295 207 ntTSL 3 BASIC4.06□□□□□ -1.76
NUP43Q8NFH3 AC012370.1-201ENST00000419244 530 ntTSL 3 BASIC4.06□□□□□ -1.76
NUP43Q8NFH3 AL592466.1-201ENST00000428346 307 ntTSL 5 BASIC4.06□□□□□ -1.76
NUP43Q8NFH3 MTND5P15-201ENST00000434246 349 ntBASIC4.06□□□□□ -1.76
NUP43Q8NFH3 ABCF2P2-201ENST00000450549 296 ntBASIC4.06□□□□□ -1.76
NUP43Q8NFH3 RPS20P22-201ENST00000473700 357 ntBASIC4.06□□□□□ -1.76
NUP43Q8NFH3 AC074250.1-201ENST00000511117 192 ntBASIC4.06□□□□□ -1.76
NUP43Q8NFH3 LINC00491-204ENST00000513815 582 ntTSL 4 BASIC4.06□□□□□ -1.76
NUP43Q8NFH3 SCARNA15.2-201ENST00000516409 127 ntBASIC4.06□□□□□ -1.76
NUP43Q8NFH3 AC025871.1-201ENST00000523935 443 ntTSL 2 BASIC4.06□□□□□ -1.76
NUP43Q8NFH3 AP006287.2-201ENST00000529036 502 ntTSL 2 BASIC4.06□□□□□ -1.76
NUP43Q8NFH3 AC103996.1-201ENST00000555468 102 ntBASIC4.06□□□□□ -1.76
NUP43Q8NFH3 AC046158.1-201ENST00000563408 719 ntTSL 3 BASIC4.06□□□□□ -1.76
NUP43Q8NFH3 MIR5096-201ENST00000583713 70 ntBASIC4.06□□□□□ -1.76
NUP43Q8NFH3 AL590235.2-201ENST00000602641 632 ntTSL 5 BASIC4.06□□□□□ -1.76
NUP43Q8NFH3 AL355877.2-201ENST00000603670 358 ntBASIC4.06□□□□□ -1.76
NUP43Q8NFH3 RNA5SP108-201ENST00000605921 117 ntBASIC4.06□□□□□ -1.76
NUP43Q8NFH3 AL021997.2-201ENST00000615674 271 ntBASIC4.06□□□□□ -1.76
NUP43Q8NFH3 LINC00901.1-201ENST00000617252 152 ntBASIC4.06□□□□□ -1.76
NUP43Q8NFH3 CFAP70-203ENST00000355577 3691 ntTSL 5 BASIC4.06□□□□□ -1.76
NUP43Q8NFH3 ENPP3-202ENST00000358229 3026 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
NUP43Q8NFH3 ITCH-202ENST00000374864 6401 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
NUP43Q8NFH3 RAPGEF6-201ENST00000296859 5618 ntAPPRIS ALT2 TSL 1 (best) BASIC4.06□□□□□ -1.76
NUP43Q8NFH3 DGKI-204ENST00000453654 12928 ntAPPRIS ALT2 TSL 1 (best) BASIC4.06□□□□□ -1.76
NUP43Q8NFH3 AC025031.4-201ENST00000621248 3271 ntBASIC4.06□□□□□ -1.76
NUP43Q8NFH3 WAC-221ENST00000628285 2740 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
NUP43Q8NFH3 FOXP2-207ENST00000393494 2664 ntAPPRIS P2 TSL 5 BASIC4.06□□□□□ -1.76
NUP43Q8NFH3 SELENOI-201ENST00000260585 8101 ntAPPRIS P2 TSL 1 (best) BASIC4.05□□□□□ -1.76
NUP43Q8NFH3 MIS12-201ENST00000381165 2505 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
NUP43Q8NFH3 C4orf17-204ENST00000514652 2542 ntAPPRIS ALT2 TSL 5 BASIC4.05□□□□□ -1.76
NUP43Q8NFH3 MME-201ENST00000360490 2360 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
NUP43Q8NFH3 GABRG2-214ENST00000639111 11735 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
NUP43Q8NFH3 OR5K1-202ENST00000642057 3466 ntAPPRIS P1 BASIC4.05□□□□□ -1.76
NUP43Q8NFH3 SLC44A5-202ENST00000370859 3896 ntAPPRIS ALT2 TSL 2 BASIC4.05□□□□□ -1.76
NUP43Q8NFH3 CLCA3P-202ENST00000466454 3412 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
NUP43Q8NFH3 DEFB108B-201ENST00000328698 222 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
NUP43Q8NFH3 DEFB108F-201ENST00000344638 222 ntBASIC4.05□□□□□ -1.76
NUP43Q8NFH3 MIR331-201ENST00000362302 94 ntBASIC4.05□□□□□ -1.76
NUP43Q8NFH3 RNA5SP28-201ENST00000363841 119 ntBASIC4.05□□□□□ -1.76
NUP43Q8NFH3 RNA5SP235-201ENST00000365411 114 ntBASIC4.05□□□□□ -1.76
NUP43Q8NFH3 RNU6-1279P-201ENST00000383917 103 ntBASIC4.05□□□□□ -1.76
NUP43Q8NFH3 Y_RNA.785-201ENST00000384290 109 ntBASIC4.05□□□□□ -1.76
NUP43Q8NFH3 MIR124-3-201ENST00000384866 87 ntBASIC4.05□□□□□ -1.76
NUP43Q8NFH3 RNA5SP332-201ENST00000391063 115 ntBASIC4.05□□□□□ -1.76
NUP43Q8NFH3 SNORD66.1-201ENST00000391230 76 ntBASIC4.05□□□□□ -1.76
NUP43Q8NFH3 MIR548H3-201ENST00000408771 118 ntBASIC4.05□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 117.7 ms