Protein–RNA interactions for Protein: Q8N2C3

DEPDC4, DEP domain-containing protein 4, humanhuman

Predictions only

Length 294 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4Q8N2C3 FUT9-201ENST00000302103 12783 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
DEPDC4Q8N2C3 LARP4-202ENST00000347328 3621 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
DEPDC4Q8N2C3 OR13G1-202ENST00000642119 2568 ntAPPRIS P1 BASIC4.83□□□□□ -1.64
DEPDC4Q8N2C3 AC118758.3-201ENST00000624628 24137 ntTSL 5 BASIC4.83□□□□□ -1.64
DEPDC4Q8N2C3 WDR35-202ENST00000345530 6960 ntAPPRIS ALT1 TSL 1 (best) BASIC4.83□□□□□ -1.64
DEPDC4Q8N2C3 AL157777.2-201ENST00000258070 137 ntBASIC4.83□□□□□ -1.64
DEPDC4Q8N2C3 RNA5SP361-201ENST00000362686 118 ntBASIC4.83□□□□□ -1.64
DEPDC4Q8N2C3 SNORD56.1-201ENST00000362913 68 ntBASIC4.83□□□□□ -1.64
DEPDC4Q8N2C3 RNU6-884P-201ENST00000363889 107 ntBASIC4.83□□□□□ -1.64
DEPDC4Q8N2C3 Y_RNA.569-201ENST00000384749 103 ntBASIC4.83□□□□□ -1.64
DEPDC4Q8N2C3 PLCL2-AS1-201ENST00000414844 311 ntTSL 2 BASIC4.83□□□□□ -1.64
DEPDC4Q8N2C3 AL358075.3-201ENST00000426289 226 ntBASIC4.83□□□□□ -1.64
DEPDC4Q8N2C3 AC078809.1-201ENST00000427601 140 ntBASIC4.83□□□□□ -1.64
DEPDC4Q8N2C3 OR6D1P-201ENST00000436165 939 ntBASIC4.83□□□□□ -1.64
DEPDC4Q8N2C3 LINC01810-201ENST00000450397 411 ntTSL 3 BASIC4.83□□□□□ -1.64
DEPDC4Q8N2C3 AL591473.1-201ENST00000464297 313 ntBASIC4.83□□□□□ -1.64
DEPDC4Q8N2C3 RN7SL547P-201ENST00000490793 290 ntBASIC4.83□□□□□ -1.64
DEPDC4Q8N2C3 RN7SL447P-201ENST00000494711 245 ntBASIC4.83□□□□□ -1.64
DEPDC4Q8N2C3 CKS1BP7-201ENST00000522230 235 ntBASIC4.83□□□□□ -1.64
DEPDC4Q8N2C3 LINC02386-202ENST00000551287 564 ntTSL 4 BASIC4.83□□□□□ -1.64
DEPDC4Q8N2C3 AC113418.1-201ENST00000569928 517 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
DEPDC4Q8N2C3 MIR1269B-201ENST00000580405 75 ntBASIC4.83□□□□□ -1.64
DEPDC4Q8N2C3 LINC01835-202ENST00000589345 450 ntTSL 3 BASIC4.83□□□□□ -1.64
DEPDC4Q8N2C3 AC012616.1-201ENST00000600294 197 ntBASIC4.83□□□□□ -1.64
DEPDC4Q8N2C3 FGF12-204ENST00000445105 5406 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
DEPDC4Q8N2C3 THOC1-221ENST00000631280 2011 ntTSL 5 BASIC4.83□□□□□ -1.64
DEPDC4Q8N2C3 CYSLTR1-201ENST00000373304 2576 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
DEPDC4Q8N2C3 EFHC1-205ENST00000538167 5308 ntTSL 5 BASIC4.83□□□□□ -1.64
DEPDC4Q8N2C3 MYBPC1-204ENST00000452455 3861 ntAPPRIS ALT2 TSL 2 BASIC4.83□□□□□ -1.64
DEPDC4Q8N2C3 RXFP1-201ENST00000307765 3842 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
DEPDC4Q8N2C3 ADGRL3-216ENST00000514157 4789 ntTSL 5 BASIC4.82□□□□□ -1.64
DEPDC4Q8N2C3 MMP16-201ENST00000286614 11558 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
DEPDC4Q8N2C3 CLSPN-206ENST00000520551 4010 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
DEPDC4Q8N2C3 DNAH8-201ENST00000327475 14360 ntAPPRIS P2 TSL 5 BASIC4.82□□□□□ -1.64
DEPDC4Q8N2C3 DOCK7-211ENST00000634264 6303 ntAPPRIS ALT2 TSL 5 BASIC4.82□□□□□ -1.64
DEPDC4Q8N2C3 PRUNE2-201ENST00000223609 2697 ntTSL 2 BASIC4.82□□□□□ -1.64
DEPDC4Q8N2C3 SLC44A5-201ENST00000370855 4406 ntAPPRIS P3 TSL 1 (best) BASIC4.82□□□□□ -1.64
DEPDC4Q8N2C3 CSMD3-203ENST00000343508 13018 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
DEPDC4Q8N2C3 MRPL42-202ENST00000393128 1983 ntAPPRIS ALT1 TSL 3 BASIC4.82□□□□□ -1.64
DEPDC4Q8N2C3 SCN1A-220ENST00000641603 12506 ntBASIC4.82□□□□□ -1.64
DEPDC4Q8N2C3 RNY4P28-201ENST00000365281 93 ntBASIC4.82□□□□□ -1.64
DEPDC4Q8N2C3 RNU6-21P-201ENST00000384710 107 ntBASIC4.82□□□□□ -1.64
DEPDC4Q8N2C3 RPL21P17-201ENST00000397467 475 ntBASIC4.82□□□□□ -1.64
DEPDC4Q8N2C3 MIR1286-201ENST00000408112 78 ntBASIC4.82□□□□□ -1.64
DEPDC4Q8N2C3 RNU6ATAC18P-201ENST00000408413 101 ntBASIC4.82□□□□□ -1.64
DEPDC4Q8N2C3 MIR1271-201ENST00000408537 86 ntBASIC4.82□□□□□ -1.64
DEPDC4Q8N2C3 Y_RNA.625-201ENST00000411256 107 ntBASIC4.82□□□□□ -1.64
DEPDC4Q8N2C3 AL357500.1-201ENST00000413004 279 ntTSL 3 BASIC4.82□□□□□ -1.64
DEPDC4Q8N2C3 FAR2P2-201ENST00000413041 594 ntBASIC4.82□□□□□ -1.64
DEPDC4Q8N2C3 AC078851.1-201ENST00000415918 298 ntTSL 3 BASIC4.82□□□□□ -1.64
DEPDC4Q8N2C3 CLEC5A-203ENST00000439991 501 ntTSL 3 BASIC4.82□□□□□ -1.64
DEPDC4Q8N2C3 AL592309.2-201ENST00000444647 607 ntTSL 5 BASIC4.82□□□□□ -1.64
DEPDC4Q8N2C3 CYP4F62P-203ENST00000455215 552 ntTSL 4 BASIC4.82□□□□□ -1.64
DEPDC4Q8N2C3 RPS5P7-201ENST00000456664 608 ntBASIC4.82□□□□□ -1.64
DEPDC4Q8N2C3 AL139260.1-202ENST00000456813 441 ntTSL 3 BASIC4.82□□□□□ -1.64
DEPDC4Q8N2C3 RPL21P104-201ENST00000464143 478 ntBASIC4.82□□□□□ -1.64
DEPDC4Q8N2C3 RPL23AP65-201ENST00000475608 468 ntBASIC4.82□□□□□ -1.64
DEPDC4Q8N2C3 MRPL42P6-201ENST00000486397 371 ntBASIC4.82□□□□□ -1.64
DEPDC4Q8N2C3 RN7SL30P-201ENST00000488416 306 ntBASIC4.82□□□□□ -1.64
DEPDC4Q8N2C3 RN7SKP46-201ENST00000515942 234 ntBASIC4.82□□□□□ -1.64
DEPDC4Q8N2C3 SCARNA16.4-201ENST00000516956 187 ntBASIC4.82□□□□□ -1.64
DEPDC4Q8N2C3 IGHVII-62-1-201ENST00000519283 235 ntBASIC4.82□□□□□ -1.64
DEPDC4Q8N2C3 RN7SL708P-201ENST00000580952 299 ntBASIC4.82□□□□□ -1.64
DEPDC4Q8N2C3 AC129510.2-201ENST00000582774 345 ntTSL 5 BASIC4.82□□□□□ -1.64
DEPDC4Q8N2C3 AC022098.3-201ENST00000590715 315 ntTSL 3 BASIC4.82□□□□□ -1.64
DEPDC4Q8N2C3 MIR7155-201ENST00000615925 56 ntBASIC4.82□□□□□ -1.64
DEPDC4Q8N2C3 MESTIT1_1.1-201ENST00000618871 140 ntBASIC4.82□□□□□ -1.64
DEPDC4Q8N2C3 NCOA3-201ENST00000371997 6750 ntAPPRIS ALT2 TSL 1 (best) BASIC4.82□□□□□ -1.64
DEPDC4Q8N2C3 ROBO2-213ENST00000614793 7662 ntTSL 5 BASIC4.82□□□□□ -1.64
DEPDC4Q8N2C3 SMG1P3-204ENST00000520823 3194 ntTSL 5 BASIC4.82□□□□□ -1.64
DEPDC4Q8N2C3 RBMS3-205ENST00000434693 8540 ntTSL 5 BASIC4.82□□□□□ -1.64
DEPDC4Q8N2C3 HMBOX1-202ENST00000355231 1694 ntTSL 5 BASIC4.82□□□□□ -1.64
DEPDC4Q8N2C3 LANCL1-204ENST00000441020 4503 ntAPPRIS P1 TSL 5 BASIC4.82□□□□□ -1.64
DEPDC4Q8N2C3 DCN-201ENST00000052754 7156 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
DEPDC4Q8N2C3 IL33-203ENST00000456383 2501 ntTSL 5 BASIC4.82□□□□□ -1.64
DEPDC4Q8N2C3 LRRC49-224ENST00000560691 2531 ntTSL 2 BASIC4.82□□□□□ -1.64
DEPDC4Q8N2C3 UGT2A3-201ENST00000251566 2965 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
DEPDC4Q8N2C3 MS4A1-202ENST00000389939 3372 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
DEPDC4Q8N2C3 AL158064.2-203ENST00000639897 2003 ntTSL 5 BASIC4.82□□□□□ -1.64
DEPDC4Q8N2C3 CCDC146-201ENST00000285871 3333 ntAPPRIS P2 TSL 1 (best) BASIC4.82□□□□□ -1.64
DEPDC4Q8N2C3 CASC1-204ENST00000395990 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC4.82□□□□□ -1.64
DEPDC4Q8N2C3 MGAT4C-207ENST00000552808 1937 ntAPPRIS P1 TSL 2 BASIC4.82□□□□□ -1.64
DEPDC4Q8N2C3 NEAT1-202ENST00000501122 22743 ntBASIC4.81□□□□□ -1.64
DEPDC4Q8N2C3 SLC1A3-216ENST00000613445 4030 ntTSL 5 BASIC4.81□□□□□ -1.64
DEPDC4Q8N2C3 EMSY-205ENST00000524767 4116 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
DEPDC4Q8N2C3 CDH17-201ENST00000027335 3693 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
DEPDC4Q8N2C3 AC063976.2-201ENST00000425667 3556 ntBASIC4.81□□□□□ -1.64
DEPDC4Q8N2C3 AHCTF1-201ENST00000326225 8633 ntAPPRIS P2 TSL 1 (best) BASIC4.81□□□□□ -1.64
DEPDC4Q8N2C3 DLEU2_6.3-201ENST00000340052 136 ntBASIC4.81□□□□□ -1.64
DEPDC4Q8N2C3 AC092268.1-201ENST00000342691 405 ntBASIC4.81□□□□□ -1.64
DEPDC4Q8N2C3 RNU5F-3P-201ENST00000363767 117 ntBASIC4.81□□□□□ -1.64
DEPDC4Q8N2C3 RNU6-1145P-201ENST00000384246 107 ntBASIC4.81□□□□□ -1.64
DEPDC4Q8N2C3 Y_RNA.570-201ENST00000384750 101 ntBASIC4.81□□□□□ -1.64
DEPDC4Q8N2C3 MIR329-1-201ENST00000385028 80 ntBASIC4.81□□□□□ -1.64
DEPDC4Q8N2C3 TRAJ48-201ENST00000390489 63 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
DEPDC4Q8N2C3 RN7SKP16-201ENST00000410180 299 ntBASIC4.81□□□□□ -1.64
DEPDC4Q8N2C3 Y_RNA.626-201ENST00000411288 95 ntBASIC4.81□□□□□ -1.64
DEPDC4Q8N2C3 AF015720.1-201ENST00000412240 349 ntTSL 3 BASIC4.81□□□□□ -1.64
DEPDC4Q8N2C3 LINC01701-201ENST00000419614 451 ntTSL 2 BASIC4.81□□□□□ -1.64
DEPDC4Q8N2C3 AC121342.1-201ENST00000423914 550 ntTSL 3 BASIC4.81□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 98.2 ms