Protein–RNA interactions for Protein: Q8IUD6

RNF135, E3 ubiquitin-protein ligase RNF135, humanhuman

Predictions only

Length 432 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF135Q8IUD6 TBC1D23-201ENST00000344949 3656 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
RNF135Q8IUD6 BBX-204ENST00000406780 3674 ntAPPRIS P3 TSL 5 BASIC5.16□□□□□ -1.58
RNF135Q8IUD6 AC233981.2-201ENST00000611524 1614 ntBASIC5.15□□□□□ -1.58
RNF135Q8IUD6 DLX6-AS1-201ENST00000430027 15364 ntTSL 2 BASIC5.15□□□□□ -1.58
RNF135Q8IUD6 OBSCN-210ENST00000570156 26925 ntAPPRIS P1 TSL 5 BASIC5.15□□□□□ -1.58
RNF135Q8IUD6 LINS1-201ENST00000314742 4821 ntAPPRIS P1 TSL 5 BASIC5.15□□□□□ -1.58
RNF135Q8IUD6 GPR85-201ENST00000297146 5079 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.58
RNF135Q8IUD6 PNISR-201ENST00000369239 5112 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.58
RNF135Q8IUD6 FANCD2-202ENST00000383807 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC5.15□□□□□ -1.58
RNF135Q8IUD6 VPS13D-213ENST00000613099 16245 ntAPPRIS ALT1 TSL 1 (best) BASIC5.15□□□□□ -1.58
RNF135Q8IUD6 STAG2-205ENST00000371160 6045 ntAPPRIS P3 TSL 1 (best) BASIC5.15□□□□□ -1.58
RNF135Q8IUD6 SNORD113.2-201ENST00000364166 89 ntBASIC5.15□□□□□ -1.59
RNF135Q8IUD6 Y_RNA.383-201ENST00000383855 97 ntBASIC5.15□□□□□ -1.59
RNF135Q8IUD6 RNU6-102P-201ENST00000384485 104 ntBASIC5.15□□□□□ -1.59
RNF135Q8IUD6 SNORA70.10-201ENST00000384515 134 ntBASIC5.15□□□□□ -1.59
RNF135Q8IUD6 TRAJ40-201ENST00000390497 61 ntAPPRIS P1 BASIC5.15□□□□□ -1.59
RNF135Q8IUD6 TRAJ6-201ENST00000390531 62 ntAPPRIS P1 BASIC5.15□□□□□ -1.59
RNF135Q8IUD6 RNU6-1154P-201ENST00000391001 104 ntBASIC5.15□□□□□ -1.59
RNF135Q8IUD6 RNU6ATAC15P-201ENST00000408279 121 ntBASIC5.15□□□□□ -1.59
RNF135Q8IUD6 TMSB10P2-201ENST00000416049 131 ntBASIC5.15□□□□□ -1.59
RNF135Q8IUD6 AC124916.1-201ENST00000444020 547 ntBASIC5.15□□□□□ -1.59
RNF135Q8IUD6 AL139260.1-202ENST00000456813 441 ntTSL 3 BASIC5.15□□□□□ -1.59
RNF135Q8IUD6 SNORA84-201ENST00000459229 133 ntBASIC5.15□□□□□ -1.59
RNF135Q8IUD6 COX6CP14-201ENST00000469580 174 ntBASIC5.15□□□□□ -1.59
RNF135Q8IUD6 RPS26P21-201ENST00000475397 348 ntBASIC5.15□□□□□ -1.59
RNF135Q8IUD6 RNU6-1073P-201ENST00000517182 106 ntBASIC5.15□□□□□ -1.59
RNF135Q8IUD6 IGHVII-62-1-201ENST00000519283 235 ntBASIC5.15□□□□□ -1.59
RNF135Q8IUD6 TBCA-207ENST00000520039 157 ntTSL 3 BASIC5.15□□□□□ -1.59
RNF135Q8IUD6 AC034105.4-201ENST00000568304 277 ntBASIC5.15□□□□□ -1.59
RNF135Q8IUD6 LINC01533-205ENST00000593056 607 ntTSL 3 BASIC5.15□□□□□ -1.59
RNF135Q8IUD6 AC104465.1-201ENST00000611365 139 ntBASIC5.15□□□□□ -1.59
RNF135Q8IUD6 AC011476.5-201ENST00000615594 130 ntBASIC5.15□□□□□ -1.59
RNF135Q8IUD6 AC099506.2-201ENST00000623074 221 ntBASIC5.15□□□□□ -1.59
RNF135Q8IUD6 AC097372.5-201ENST00000623665 376 ntBASIC5.15□□□□□ -1.59
RNF135Q8IUD6 U6.106-201ENST00000636360 105 ntBASIC5.15□□□□□ -1.59
RNF135Q8IUD6 WDR35-202ENST00000345530 6960 ntAPPRIS ALT1 TSL 1 (best) BASIC5.15□□□□□ -1.59
RNF135Q8IUD6 TET2-202ENST00000305737 9233 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
RNF135Q8IUD6 DLG1-216ENST00000450955 2682 ntAPPRIS ALT1 TSL 5 BASIC5.15□□□□□ -1.59
RNF135Q8IUD6 FAM216B-201ENST00000313851 3243 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
RNF135Q8IUD6 ACTR6-212ENST00000552376 1659 ntTSL 5 BASIC5.15□□□□□ -1.59
RNF135Q8IUD6 SMC2-AS1-201ENST00000603487 7020 ntTSL 2 BASIC5.15□□□□□ -1.59
RNF135Q8IUD6 CASC19-201ENST00000500112 5735 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
RNF135Q8IUD6 EIF2AK3-203ENST00000419748 4222 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
RNF135Q8IUD6 RANBP3L-201ENST00000296604 3104 ntAPPRIS P3 TSL 1 (best) BASIC5.14□□□□□ -1.59
RNF135Q8IUD6 RNU6-290P-201ENST00000365212 101 ntBASIC5.14□□□□□ -1.59
RNF135Q8IUD6 RNY4P28-201ENST00000365281 93 ntBASIC5.14□□□□□ -1.59
RNF135Q8IUD6 LINC02337-201ENST00000401043 374 ntTSL 3 BASIC5.14□□□□□ -1.59
RNF135Q8IUD6 AL445259.1-203ENST00000427828 251 ntTSL 3 BASIC5.14□□□□□ -1.59
RNF135Q8IUD6 NDUFA6-201ENST00000470753 475 ntTSL 2 BASIC5.14□□□□□ -1.59
RNF135Q8IUD6 RN7SKP272-201ENST00000516988 232 ntBASIC5.14□□□□□ -1.59
RNF135Q8IUD6 AC012413.1-201ENST00000521294 519 ntTSL 2 BASIC5.14□□□□□ -1.59
RNF135Q8IUD6 AP006245.1-201ENST00000522549 120 ntBASIC5.14□□□□□ -1.59
RNF135Q8IUD6 AC006349.1-201ENST00000555526 235 ntBASIC5.14□□□□□ -1.59
RNF135Q8IUD6 TRAV28-201ENST00000557548 323 ntBASIC5.14□□□□□ -1.59
RNF135Q8IUD6 AC040958.1-201ENST00000561102 201 ntBASIC5.14□□□□□ -1.59
RNF135Q8IUD6 AC010928.2-201ENST00000588017 287 ntBASIC5.14□□□□□ -1.59
RNF135Q8IUD6 AC008035.1-201ENST00000607353 448 ntTSL 3 BASIC5.14□□□□□ -1.59
RNF135Q8IUD6 CCL14-203ENST00000620991 426 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
RNF135Q8IUD6 SCARNA4-201ENST00000629045 128 ntBASIC5.14□□□□□ -1.59
RNF135Q8IUD6 TMEM71-210ENST00000523829 1974 ntAPPRIS ALT2 TSL 5 BASIC5.14□□□□□ -1.59
RNF135Q8IUD6 PKHD1-202ENST00000371117 16282 ntAPPRIS P4 TSL 1 (best) BASIC5.14□□□□□ -1.59
RNF135Q8IUD6 AL022322.2-201ENST00000624072 20397 ntBASIC5.14□□□□□ -1.59
RNF135Q8IUD6 PIK3C3-217ENST00000639914 2722 ntTSL 5 BASIC5.14□□□□□ -1.59
RNF135Q8IUD6 SPART-202ENST00000438666 4789 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
RNF135Q8IUD6 CLEC1B-204ENST00000428126 3054 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
RNF135Q8IUD6 MED23-203ENST00000368058 4576 ntTSL 5 BASIC5.14□□□□□ -1.59
RNF135Q8IUD6 AP000542.2-201ENST00000623199 6179 ntBASIC5.14□□□□□ -1.59
RNF135Q8IUD6 AC009541.1-201ENST00000438279 2662 ntBASIC5.13□□□□□ -1.59
RNF135Q8IUD6 MMP16-201ENST00000286614 11558 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
RNF135Q8IUD6 GPATCH2L-214ENST00000621494 12396 ntAPPRIS P1 TSL 2 BASIC5.13□□□□□ -1.59
RNF135Q8IUD6 SPEF2-216ENST00000637569 7350 ntAPPRIS ALT2 TSL 5 BASIC5.13□□□□□ -1.59
RNF135Q8IUD6 ZBTB38-201ENST00000321464 3588 ntAPPRIS P1 BASIC5.13□□□□□ -1.59
RNF135Q8IUD6 MMRN1-204ENST00000508372 3234 ntTSL 2 BASIC5.13□□□□□ -1.59
RNF135Q8IUD6 MRPL50-201ENST00000374865 3332 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
RNF135Q8IUD6 ZBED5-201ENST00000413761 2512 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
RNF135Q8IUD6 RNU6-222P-201ENST00000362438 107 ntBASIC5.13□□□□□ -1.59
RNF135Q8IUD6 RNU6-105P-201ENST00000363909 104 ntBASIC5.13□□□□□ -1.59
RNF135Q8IUD6 Y_RNA.398-201ENST00000383952 99 ntBASIC5.13□□□□□ -1.59
RNF135Q8IUD6 U3.32-201ENST00000408116 212 ntBASIC5.13□□□□□ -1.59
RNF135Q8IUD6 RNU6-394P-201ENST00000410735 107 ntBASIC5.13□□□□□ -1.59
RNF135Q8IUD6 RPL19P1-201ENST00000411635 428 ntBASIC5.13□□□□□ -1.59
RNF135Q8IUD6 AC140479.3-201ENST00000418944 1126 ntBASIC5.13□□□□□ -1.59
RNF135Q8IUD6 AP000907.1-201ENST00000428428 510 ntBASIC5.13□□□□□ -1.59
RNF135Q8IUD6 AC007389.2-201ENST00000434630 306 ntBASIC5.13□□□□□ -1.59
RNF135Q8IUD6 AL031659.1-201ENST00000447075 539 ntBASIC5.13□□□□□ -1.59
RNF135Q8IUD6 NUTF2P3-201ENST00000448540 384 ntBASIC5.13□□□□□ -1.59
RNF135Q8IUD6 AC087477.1-201ENST00000465747 340 ntBASIC5.13□□□□□ -1.59
RNF135Q8IUD6 NIP7P2-201ENST00000485801 544 ntBASIC5.13□□□□□ -1.59
RNF135Q8IUD6 SNORA70.16-201ENST00000516390 95 ntBASIC5.13□□□□□ -1.59
RNF135Q8IUD6 UBE2Q2P8-201ENST00000560644 102 ntBASIC5.13□□□□□ -1.59
RNF135Q8IUD6 MIR4429-201ENST00000580105 73 ntBASIC5.13□□□□□ -1.59
RNF135Q8IUD6 LINC01533-202ENST00000588694 632 ntTSL 2 BASIC5.13□□□□□ -1.59
RNF135Q8IUD6 LINC01232-203ENST00000625369 576 ntTSL 4 BASIC5.13□□□□□ -1.59
RNF135Q8IUD6 MIR99AHG-219ENST00000619222 3476 ntTSL 2 BASIC5.13□□□□□ -1.59
RNF135Q8IUD6 DNAAF4-CCPG1-201ENST00000565113 4589 ntTSL 2 BASIC5.13□□□□□ -1.59
RNF135Q8IUD6 OXR1-206ENST00000449762 2621 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
RNF135Q8IUD6 ANO3-202ENST00000525139 3257 ntAPPRIS ALT1 TSL 5 BASIC5.12□□□□□ -1.59
RNF135Q8IUD6 CNGB3-201ENST00000320005 4347 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
RNF135Q8IUD6 PCDH9-203ENST00000456367 5072 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
RNF135Q8IUD6 RNU4-90P-201ENST00000362773 141 ntBASIC5.12□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 120.9 ms