Protein–RNA interactions for Protein: Q86TL0

ATG4D, Cysteine protease ATG4D, humanhuman

Predicted RBP Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4DQ86TL0 RNU6-821P-201ENST00000390995 107 ntBASIC4.15□□□□□ -1.75
ATG4DQ86TL0 Y_RNA.580-201ENST00000391004 95 ntBASIC4.15□□□□□ -1.75
ATG4DQ86TL0 LAMTOR3P1-201ENST00000428620 370 ntBASIC4.15□□□□□ -1.75
ATG4DQ86TL0 AC062032.1-201ENST00000436245 355 ntTSL 5 BASIC4.15□□□□□ -1.75
ATG4DQ86TL0 AC005002.2-201ENST00000438228 269 ntBASIC4.15□□□□□ -1.75
ATG4DQ86TL0 LINC00280-201ENST00000439525 448 ntTSL 2 BASIC4.15□□□□□ -1.75
ATG4DQ86TL0 AC011897.1-201ENST00000450715 346 ntTSL 3 BASIC4.15□□□□□ -1.75
ATG4DQ86TL0 AL441989.1-201ENST00000454204 382 ntTSL 3 BASIC4.15□□□□□ -1.75
ATG4DQ86TL0 BCL2L15-204ENST00000471267 267 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
ATG4DQ86TL0 RPS26P21-201ENST00000475397 348 ntBASIC4.15□□□□□ -1.75
ATG4DQ86TL0 AP001025.1-201ENST00000486139 332 ntBASIC4.15□□□□□ -1.75
ATG4DQ86TL0 AC110767.1-201ENST00000508374 239 ntTSL 3 BASIC4.15□□□□□ -1.75
ATG4DQ86TL0 LNX1-AS1-203ENST00000511989 488 ntTSL 2 BASIC4.15□□□□□ -1.75
ATG4DQ86TL0 RNU7-175P-201ENST00000515915 61 ntBASIC4.15□□□□□ -1.75
ATG4DQ86TL0 RNU6-612P-201ENST00000516909 102 ntBASIC4.15□□□□□ -1.75
ATG4DQ86TL0 RNU6-840P-201ENST00000517275 65 ntBASIC4.15□□□□□ -1.75
ATG4DQ86TL0 AC113192.1-201ENST00000527270 321 ntTSL 3 BASIC4.15□□□□□ -1.75
ATG4DQ86TL0 AC084880.2-201ENST00000536009 501 ntTSL 3 BASIC4.15□□□□□ -1.75
ATG4DQ86TL0 AL359237.1-202ENST00000556168 487 ntTSL 5 BASIC4.15□□□□□ -1.75
ATG4DQ86TL0 FAM60BP-201ENST00000578364 658 ntBASIC4.15□□□□□ -1.75
ATG4DQ86TL0 AP001120.2-201ENST00000589395 296 ntTSL 3 BASIC4.15□□□□□ -1.75
ATG4DQ86TL0 LGALS13-204ENST00000621475 494 ntAPPRIS ALT2 TSL 5 BASIC4.15□□□□□ -1.75
ATG4DQ86TL0 AC008785.1-201ENST00000624475 456 ntBASIC4.15□□□□□ -1.75
ATG4DQ86TL0 GABRG2-217ENST00000639384 5360 ntTSL 5 BASIC4.15□□□□□ -1.75
ATG4DQ86TL0 SEL1L2-201ENST00000284951 2224 ntAPPRIS P1 TSL 5 BASIC4.15□□□□□ -1.75
ATG4DQ86TL0 TECRL-201ENST00000381210 3573 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
ATG4DQ86TL0 RAG2-209ENST00000618712 2818 ntAPPRIS P1 TSL 4 BASIC4.15□□□□□ -1.75
ATG4DQ86TL0 TBC1D15-210ENST00000485960 2489 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
ATG4DQ86TL0 OR2L13-201ENST00000358120 1942 ntAPPRIS P1 BASIC4.15□□□□□ -1.75
ATG4DQ86TL0 CP-201ENST00000264613 4676 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
ATG4DQ86TL0 RPS6KA5-207ENST00000614987 26795 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
ATG4DQ86TL0 SCOC-203ENST00000394203 1999 ntTSL 2 BASIC4.14□□□□□ -1.75
ATG4DQ86TL0 IQGAP2-203ENST00000396234 3376 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
ATG4DQ86TL0 PCDH11X-204ENST00000373088 4069 ntAPPRIS ALT2 TSL 1 (best) BASIC4.14□□□□□ -1.75
ATG4DQ86TL0 MUC12-202ENST00000379442 16737 ntAPPRIS ALT2 TSL 5 BASIC4.14□□□□□ -1.75
ATG4DQ86TL0 CYLC2-202ENST00000487798 2053 ntAPPRIS P1 TSL 5 BASIC4.14□□□□□ -1.75
ATG4DQ86TL0 CLCA1-201ENST00000234701 3310 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
ATG4DQ86TL0 FGD4-210ENST00000525053 2925 ntTSL 2 BASIC4.14□□□□□ -1.75
ATG4DQ86TL0 MUC7-202ENST00000413702 2540 ntAPPRIS P2 TSL 4 BASIC4.14□□□□□ -1.75
ATG4DQ86TL0 AC021146.4-201ENST00000309229 279 ntBASIC4.14□□□□□ -1.75
ATG4DQ86TL0 RNU6-222P-201ENST00000362438 107 ntBASIC4.14□□□□□ -1.75
ATG4DQ86TL0 NFIB-203ENST00000380934 2142 ntTSL 2 BASIC4.14□□□□□ -1.75
ATG4DQ86TL0 RNU6-1289P-201ENST00000384431 106 ntBASIC4.14□□□□□ -1.75
ATG4DQ86TL0 SDHCP2-201ENST00000398565 501 ntBASIC4.14□□□□□ -1.75
ATG4DQ86TL0 MIR298-201ENST00000401212 88 ntBASIC4.14□□□□□ -1.75
ATG4DQ86TL0 AC016712.1-201ENST00000431088 378 ntBASIC4.14□□□□□ -1.75
ATG4DQ86TL0 AL135923.2-201ENST00000435444 501 ntTSL 2 BASIC4.14□□□□□ -1.75
ATG4DQ86TL0 BX276092.4-201ENST00000452056 248 ntBASIC4.14□□□□□ -1.75
ATG4DQ86TL0 AC073218.1-201ENST00000458413 171 ntTSL 5 BASIC4.14□□□□□ -1.75
ATG4DQ86TL0 FPGT-203ENST00000467578 601 ntTSL 2 BASIC4.14□□□□□ -1.75
ATG4DQ86TL0 AC114982.1-201ENST00000469402 321 ntBASIC4.14□□□□□ -1.75
ATG4DQ86TL0 AC010683.1-201ENST00000473673 378 ntBASIC4.14□□□□□ -1.75
ATG4DQ86TL0 AC108022.1-201ENST00000493466 478 ntBASIC4.14□□□□□ -1.75
ATG4DQ86TL0 AC068658.1-201ENST00000507509 388 ntTSL 2 BASIC4.14□□□□□ -1.75
ATG4DQ86TL0 TRAPPC2P7-201ENST00000509650 231 ntBASIC4.14□□□□□ -1.75
ATG4DQ86TL0 RN7SKP277-201ENST00000516895 283 ntBASIC4.14□□□□□ -1.75
ATG4DQ86TL0 RN7SKP272-201ENST00000516988 232 ntBASIC4.14□□□□□ -1.75
ATG4DQ86TL0 SNHG1-210ENST00000539303 240 ntTSL 3 BASIC4.14□□□□□ -1.75
ATG4DQ86TL0 AC090510.1-201ENST00000567456 425 ntTSL 3 BASIC4.14□□□□□ -1.75
ATG4DQ86TL0 SNORD113-5-201ENST00000607261 78 ntBASIC4.14□□□□□ -1.75
ATG4DQ86TL0 MIR6758-201ENST00000620653 63 ntBASIC4.14□□□□□ -1.75
ATG4DQ86TL0 C4orf22-209ENST00000621014 228 ntTSL 3 BASIC4.14□□□□□ -1.75
ATG4DQ86TL0 Metazoa_SRP.193-201ENST00000622007 277 ntBASIC4.14□□□□□ -1.75
ATG4DQ86TL0 MIR7641-1-201ENST00000627518 61 ntBASIC4.14□□□□□ -1.75
ATG4DQ86TL0 RASGRP1-209ENST00000559830 1910 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
ATG4DQ86TL0 LRRC77P-206ENST00000481578 2350 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
ATG4DQ86TL0 SOCS5-201ENST00000306503 4771 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
ATG4DQ86TL0 MAPK10-235ENST00000638225 8941 ntAPPRIS P2 TSL 1 (best) BASIC4.14□□□□□ -1.75
ATG4DQ86TL0 BCLAF1P2-201ENST00000624956 2609 ntBASIC4.14□□□□□ -1.75
ATG4DQ86TL0 ELOVL7-203ENST00000505959 4165 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
ATG4DQ86TL0 EEF1A1-211ENST00000615060 3508 ntTSL 5 BASIC4.14□□□□□ -1.75
ATG4DQ86TL0 PTPN22-203ENST00000460620 1794 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
ATG4DQ86TL0 NUP205-201ENST00000285968 6266 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
ATG4DQ86TL0 GHR-209ENST00000612626 4524 ntAPPRIS P1 TSL 5 BASIC4.14□□□□□ -1.75
ATG4DQ86TL0 OR51H2P-202ENST00000641424 3046 ntBASIC4.13□□□□□ -1.75
ATG4DQ86TL0 MAP3K19-201ENST00000358371 3719 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
ATG4DQ86TL0 ATP2C1-212ENST00000507488 3579 ntAPPRIS ALT2 TSL 2 BASIC4.13□□□□□ -1.75
ATG4DQ86TL0 AL450326.2-201ENST00000421913 1962 ntBASIC4.13□□□□□ -1.75
ATG4DQ86TL0 KCNJ6-201ENST00000609713 19645 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
ATG4DQ86TL0 KANSL1L-209ENST00000457374 2264 ntTSL 2 BASIC4.13□□□□□ -1.75
ATG4DQ86TL0 ZZZ3-202ENST00000370801 4328 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
ATG4DQ86TL0 RNU1-20P-201ENST00000363314 162 ntBASIC4.13□□□□□ -1.75
ATG4DQ86TL0 RNU6-263P-201ENST00000363811 107 ntBASIC4.13□□□□□ -1.75
ATG4DQ86TL0 RNA5SP205-201ENST00000364653 136 ntBASIC4.13□□□□□ -1.75
ATG4DQ86TL0 RNU6-818P-201ENST00000364837 108 ntBASIC4.13□□□□□ -1.75
ATG4DQ86TL0 RNU6-384P-201ENST00000364900 104 ntBASIC4.13□□□□□ -1.75
ATG4DQ86TL0 RGS4-201ENST00000367906 930 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
ATG4DQ86TL0 Y_RNA.400-201ENST00000383963 111 ntBASIC4.13□□□□□ -1.75
ATG4DQ86TL0 TRAV9-2-201ENST00000390441 394 ntAPPRIS P1 BASIC4.13□□□□□ -1.75
ATG4DQ86TL0 TNFRSF17-202ENST00000396495 668 ntAPPRIS ALT2 TSL 1 (best) BASIC4.13□□□□□ -1.75
ATG4DQ86TL0 Y_RNA.623-201ENST00000411128 95 ntBASIC4.13□□□□□ -1.75
ATG4DQ86TL0 C10orf128-207ENST00000474718 614 ntAPPRIS P3 TSL 1 (best) BASIC4.13□□□□□ -1.75
ATG4DQ86TL0 RN7SL817P-201ENST00000480777 288 ntBASIC4.13□□□□□ -1.75
ATG4DQ86TL0 LINC01206-205ENST00000490001 949 ntTSL 5 BASIC4.13□□□□□ -1.75
ATG4DQ86TL0 AC113167.1-201ENST00000512941 570 ntTSL 4 BASIC4.13□□□□□ -1.75
ATG4DQ86TL0 RNU6-426P-201ENST00000516464 97 ntBASIC4.13□□□□□ -1.75
ATG4DQ86TL0 MFAP5-211ENST00000540087 492 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
ATG4DQ86TL0 ZNF84-212ENST00000542874 540 ntTSL 5 BASIC4.13□□□□□ -1.75
ATG4DQ86TL0 AL133383.1-201ENST00000569292 901 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
ATG4DQ86TL0 AC090617.3-201ENST00000573670 475 ntBASIC4.13□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 111.3 ms