Protein–RNA interactions for Protein: Q5M7Z0

RNFT1, E3 ubiquitin-protein ligase RNFT1, humanhuman

Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNFT1Q5M7Z0 BCLAF1-201ENST00000353331 7110 ntTSL 5 BASIC4.67□□□□□ -1.66
RNFT1Q5M7Z0 RNU6-407P-201ENST00000365280 104 ntBASIC4.67□□□□□ -1.66
RNFT1Q5M7Z0 SNORA56-201ENST00000383966 129 ntBASIC4.67□□□□□ -1.66
RNFT1Q5M7Z0 U8.10-201ENST00000384260 133 ntBASIC4.67□□□□□ -1.66
RNFT1Q5M7Z0 RNA5SP187-201ENST00000384400 119 ntBASIC4.67□□□□□ -1.66
RNFT1Q5M7Z0 SNORD116-21-201ENST00000384507 92 ntBASIC4.67□□□□□ -1.66
RNFT1Q5M7Z0 MIR626-201ENST00000385032 94 ntBASIC4.67□□□□□ -1.66
RNFT1Q5M7Z0 TRAJ38-201ENST00000390499 62 ntAPPRIS P1 BASIC4.67□□□□□ -1.66
RNFT1Q5M7Z0 RNU6-763P-201ENST00000390865 106 ntBASIC4.67□□□□□ -1.66
RNFT1Q5M7Z0 MTHFD2P2-201ENST00000407725 247 ntBASIC4.67□□□□□ -1.66
RNFT1Q5M7Z0 LINC00894-203ENST00000432696 298 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
RNFT1Q5M7Z0 BX276092.4-201ENST00000452056 248 ntBASIC4.67□□□□□ -1.66
RNFT1Q5M7Z0 AC114501.3-201ENST00000453648 164 ntTSL 5 BASIC4.67□□□□□ -1.66
RNFT1Q5M7Z0 AL353152.1-201ENST00000455973 470 ntTSL 5 BASIC4.67□□□□□ -1.66
RNFT1Q5M7Z0 AC092666.1-201ENST00000492054 573 ntTSL 4 BASIC4.67□□□□□ -1.66
RNFT1Q5M7Z0 SNORD33.1-201ENST00000516213 88 ntBASIC4.67□□□□□ -1.66
RNFT1Q5M7Z0 LINC01859-201ENST00000565584 1024 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
RNFT1Q5M7Z0 MIR4512-201ENST00000583257 77 ntBASIC4.67□□□□□ -1.66
RNFT1Q5M7Z0 AC092364.1-202ENST00000593824 565 ntTSL 4 BASIC4.67□□□□□ -1.66
RNFT1Q5M7Z0 LMBR1-222ENST00000638959 93 ntTSL 5 BASIC4.67□□□□□ -1.66
RNFT1Q5M7Z0 FAM184A-212ENST00000522284 2721 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
RNFT1Q5M7Z0 AC064875.1-201ENST00000425974 1942 ntTSL 2 BASIC4.67□□□□□ -1.66
RNFT1Q5M7Z0 VPS13C-204ENST00000395898 11012 ntAPPRIS ALT2 TSL 1 (best) BASIC4.67□□□□□ -1.66
RNFT1Q5M7Z0 DCX-202ENST00000358070 9405 ntAPPRIS ALT1 TSL 1 (best) BASIC4.67□□□□□ -1.66
RNFT1Q5M7Z0 OBSCN-214ENST00000636875 23907 ntTSL 5 BASIC4.67□□□□□ -1.66
RNFT1Q5M7Z0 NPSR1-AS1-202ENST00000419766 4821 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
RNFT1Q5M7Z0 ZNF492-201ENST00000456783 4245 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
RNFT1Q5M7Z0 AC103740.1-201ENST00000558888 7427 ntTSL 2 BASIC4.66□□□□□ -1.66
RNFT1Q5M7Z0 ERCC6L-201ENST00000334463 4243 ntAPPRIS P2 TSL 1 (best) BASIC4.66□□□□□ -1.66
RNFT1Q5M7Z0 EDIL3-202ENST00000380138 4244 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
RNFT1Q5M7Z0 ATP1B4-201ENST00000218008 3868 ntAPPRIS ALT1 TSL 1 (best) BASIC4.66□□□□□ -1.66
RNFT1Q5M7Z0 AC104793.1-201ENST00000508189 2840 ntTSL 2 BASIC4.66□□□□□ -1.66
RNFT1Q5M7Z0 CDH19-201ENST00000262150 6341 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
RNFT1Q5M7Z0 RNU6-235P-201ENST00000362644 107 ntBASIC4.66□□□□□ -1.66
RNFT1Q5M7Z0 Y_RNA.101-201ENST00000363154 102 ntBASIC4.66□□□□□ -1.66
RNFT1Q5M7Z0 RNA5SP428-201ENST00000365129 132 ntBASIC4.66□□□□□ -1.66
RNFT1Q5M7Z0 RNU6-643P-201ENST00000384018 107 ntBASIC4.66□□□□□ -1.66
RNFT1Q5M7Z0 RNU6-245P-201ENST00000384020 107 ntBASIC4.66□□□□□ -1.66
RNFT1Q5M7Z0 SNORA36C-201ENST00000384289 132 ntBASIC4.66□□□□□ -1.66
RNFT1Q5M7Z0 MIR589-201ENST00000385238 99 ntBASIC4.66□□□□□ -1.66
RNFT1Q5M7Z0 RNU6-1199P-201ENST00000411249 104 ntBASIC4.66□□□□□ -1.66
RNFT1Q5M7Z0 AL360175.1-201ENST00000426547 285 ntTSL 5 BASIC4.66□□□□□ -1.66
RNFT1Q5M7Z0 AC016292.1-201ENST00000438344 235 ntTSL 3 BASIC4.66□□□□□ -1.66
RNFT1Q5M7Z0 AL160271.1-201ENST00000444708 829 ntTSL 3 BASIC4.66□□□□□ -1.66
RNFT1Q5M7Z0 U8.19-201ENST00000459095 133 ntBASIC4.66□□□□□ -1.66
RNFT1Q5M7Z0 RNU6-1198P-201ENST00000516904 67 ntBASIC4.66□□□□□ -1.66
RNFT1Q5M7Z0 AC025437.5-201ENST00000522769 314 ntTSL 3 BASIC4.66□□□□□ -1.66
RNFT1Q5M7Z0 ZNF192P1-203ENST00000565888 810 ntBASIC4.66□□□□□ -1.66
RNFT1Q5M7Z0 Y_RNA.757-201ENST00000578934 114 ntBASIC4.66□□□□□ -1.66
RNFT1Q5M7Z0 AC105254.2-201ENST00000603636 436 ntBASIC4.66□□□□□ -1.66
RNFT1Q5M7Z0 AP005432.2-201ENST00000608162 586 ntBASIC4.66□□□□□ -1.66
RNFT1Q5M7Z0 AL357075.2-201ENST00000614906 189 ntBASIC4.66□□□□□ -1.66
RNFT1Q5M7Z0 AC131238.1-201ENST00000617135 328 ntBASIC4.66□□□□□ -1.66
RNFT1Q5M7Z0 Metazoa_SRP.93-201ENST00000622525 276 ntBASIC4.66□□□□□ -1.66
RNFT1Q5M7Z0 DSE-204ENST00000452085 10586 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
RNFT1Q5M7Z0 ERVW-1-201ENST00000493463 2925 ntAPPRIS P1 BASIC4.66□□□□□ -1.66
RNFT1Q5M7Z0 FAP-214ENST00000627638 2569 ntAPPRIS ALT1 TSL 5 BASIC4.66□□□□□ -1.66
RNFT1Q5M7Z0 ABI3BP-215ENST00000495063 3714 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
RNFT1Q5M7Z0 EIF3M-208ENST00000531120 5051 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
RNFT1Q5M7Z0 SEC31A-209ENST00000500777 3610 ntTSL 5 BASIC4.66□□□□□ -1.66
RNFT1Q5M7Z0 AL033384.1-202ENST00000431554 3104 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
RNFT1Q5M7Z0 NCOA3-201ENST00000371997 6750 ntAPPRIS ALT2 TSL 1 (best) BASIC4.65□□□□□ -1.66
RNFT1Q5M7Z0 LMO3-201ENST00000261169 3810 ntTSL 1 (best) BASIC4.65□□□□□ -1.66
RNFT1Q5M7Z0 PLEKHG7-203ENST00000638590 3267 ntAPPRIS P1 TSL 2 BASIC4.65□□□□□ -1.66
RNFT1Q5M7Z0 FILIP1L-209ENST00000487087 2321 ntTSL 5 BASIC4.65□□□□□ -1.66
RNFT1Q5M7Z0 MIR450A1-201ENST00000362262 91 ntBASIC4.65□□□□□ -1.67
RNFT1Q5M7Z0 SNORD115-8-201ENST00000363856 82 ntBASIC4.65□□□□□ -1.67
RNFT1Q5M7Z0 RNU6-294P-201ENST00000364999 102 ntBASIC4.65□□□□□ -1.67
RNFT1Q5M7Z0 SNORD115-38-201ENST00000365037 82 ntBASIC4.65□□□□□ -1.67
RNFT1Q5M7Z0 RCAN3-201ENST00000374393 382 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
RNFT1Q5M7Z0 BPY2-202ENST00000382585 321 ntAPPRIS P5 TSL 1 (best) BASIC4.65□□□□□ -1.67
RNFT1Q5M7Z0 SNORA8.3-201ENST00000384679 139 ntBASIC4.65□□□□□ -1.67
RNFT1Q5M7Z0 RNU6ATAC19P-201ENST00000408096 110 ntBASIC4.65□□□□□ -1.67
RNFT1Q5M7Z0 COX6B1P1-201ENST00000415962 213 ntBASIC4.65□□□□□ -1.67
RNFT1Q5M7Z0 HSPE1P13-201ENST00000451143 297 ntBASIC4.65□□□□□ -1.67
RNFT1Q5M7Z0 IFNWP4-201ENST00000453148 294 ntBASIC4.65□□□□□ -1.67
RNFT1Q5M7Z0 AC079760.1-201ENST00000456952 202 ntTSL 3 BASIC4.65□□□□□ -1.67
RNFT1Q5M7Z0 RPL23AP24-201ENST00000458203 385 ntBASIC4.65□□□□□ -1.67
RNFT1Q5M7Z0 AL159163.1-201ENST00000507747 600 ntAPPRIS P1 TSL 5 BASIC4.65□□□□□ -1.67
RNFT1Q5M7Z0 RN7SKP260-201ENST00000516907 149 ntBASIC4.65□□□□□ -1.67
RNFT1Q5M7Z0 RNU6-58P-201ENST00000517143 103 ntBASIC4.65□□□□□ -1.67
RNFT1Q5M7Z0 CYCSP23-201ENST00000519781 313 ntBASIC4.65□□□□□ -1.67
RNFT1Q5M7Z0 AC079098.1-202ENST00000523150 573 ntTSL 5 BASIC4.65□□□□□ -1.67
RNFT1Q5M7Z0 AL138963.2-201ENST00000605137 226 ntBASIC4.65□□□□□ -1.67
RNFT1Q5M7Z0 AP002826.1-201ENST00000608835 315 ntBASIC4.65□□□□□ -1.67
RNFT1Q5M7Z0 BPY2B-204ENST00000615850 321 ntAPPRIS P5 TSL 1 (best) BASIC4.65□□□□□ -1.67
RNFT1Q5M7Z0 BPY2C-204ENST00000618574 321 ntAPPRIS P5 TSL 1 (best) BASIC4.65□□□□□ -1.67
RNFT1Q5M7Z0 DYNC1I2-201ENST00000340296 2589 ntAPPRIS P4 TSL 1 (best) BASIC4.65□□□□□ -1.67
RNFT1Q5M7Z0 ZNF525-202ENST00000474037 3890 ntAPPRIS P1 TSL 5 BASIC4.65□□□□□ -1.67
RNFT1Q5M7Z0 RGS17-202ENST00000367225 7773 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
RNFT1Q5M7Z0 MSTN-201ENST00000260950 2822 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
RNFT1Q5M7Z0 DTHD1-205ENST00000507598 2606 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
RNFT1Q5M7Z0 ARHGEF3-203ENST00000413728 3992 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
RNFT1Q5M7Z0 LDAH-211ENST00000541941 3807 ntTSL 2 BASIC4.65□□□□□ -1.67
RNFT1Q5M7Z0 CNTN5-207ENST00000527185 4303 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
RNFT1Q5M7Z0 GTDC1-206ENST00000409214 2954 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
RNFT1Q5M7Z0 B3GNT5-201ENST00000326505 4123 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
RNFT1Q5M7Z0 CARF-208ENST00000428585 2513 ntTSL 2 BASIC4.65□□□□□ -1.67
RNFT1Q5M7Z0 DNM3OS-201ENST00000417354 4358 ntTSL 4 BASIC4.65□□□□□ -1.67
RNFT1Q5M7Z0 ADGRL2-222ENST00000627151 5789 ntTSL 5 BASIC4.65□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 99 ms