Protein–RNA interactions for Protein: Q2NKJ3

CTC1, CST complex subunit CTC1, humanhuman

Predictions only

Length 1,217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTC1Q2NKJ3 UBA52P6-201ENST00000399822 382 ntBASIC5.3□□□□□ -1.56
CTC1Q2NKJ3 AC118345.1-201ENST00000411785 366 ntTSL 3 BASIC5.3□□□□□ -1.56
CTC1Q2NKJ3 AL117339.3-201ENST00000418733 162 ntBASIC5.3□□□□□ -1.56
CTC1Q2NKJ3 NDUFB4P7-201ENST00000423198 363 ntBASIC5.3□□□□□ -1.56
CTC1Q2NKJ3 AC004870.4-201ENST00000424359 360 ntTSL 2 BASIC5.3□□□□□ -1.56
CTC1Q2NKJ3 RPL23AP1-201ENST00000428990 471 ntBASIC5.3□□□□□ -1.56
CTC1Q2NKJ3 BX323845.1-201ENST00000432417 179 ntBASIC5.3□□□□□ -1.56
CTC1Q2NKJ3 Z73495.1-201ENST00000444982 147 ntTSL 3 BASIC5.3□□□□□ -1.56
CTC1Q2NKJ3 TEX41-209ENST00000451478 452 ntTSL 2 BASIC5.3□□□□□ -1.56
CTC1Q2NKJ3 AL441989.1-201ENST00000454204 382 ntTSL 3 BASIC5.3□□□□□ -1.56
CTC1Q2NKJ3 IGKV2D-30-201ENST00000474213 395 ntAPPRIS P1 BASIC5.3□□□□□ -1.56
CTC1Q2NKJ3 AC092991.1-201ENST00000477176 376 ntBASIC5.3□□□□□ -1.56
CTC1Q2NKJ3 AC063944.1-201ENST00000496943 295 ntTSL 3 BASIC5.3□□□□□ -1.56
CTC1Q2NKJ3 SNORA31.3-201ENST00000516029 96 ntBASIC5.3□□□□□ -1.56
CTC1Q2NKJ3 RN7SKP258-201ENST00000517151 304 ntBASIC5.3□□□□□ -1.56
CTC1Q2NKJ3 AP003400.1-201ENST00000528319 231 ntTSL 5 BASIC5.3□□□□□ -1.56
CTC1Q2NKJ3 AC023575.1-201ENST00000580510 358 ntBASIC5.3□□□□□ -1.56
CTC1Q2NKJ3 AL356218.2-201ENST00000605264 187 ntBASIC5.3□□□□□ -1.56
CTC1Q2NKJ3 MIR6130-201ENST00000619419 109 ntBASIC5.3□□□□□ -1.56
CTC1Q2NKJ3 ZEB1-202ENST00000361642 5990 ntAPPRIS ALT2 TSL 1 (best) BASIC5.3□□□□□ -1.56
CTC1Q2NKJ3 SLC4A7-206ENST00000428386 7385 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
CTC1Q2NKJ3 CDC42BPA-204ENST00000366767 9320 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
CTC1Q2NKJ3 FAM184A-212ENST00000522284 2721 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
CTC1Q2NKJ3 ZNF181-203ENST00000459757 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC5.3□□□□□ -1.56
CTC1Q2NKJ3 AL596211.1-201ENST00000569873 2277 ntBASIC5.3□□□□□ -1.56
CTC1Q2NKJ3 TRPM6-203ENST00000361255 8271 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
CTC1Q2NKJ3 AC139713.2-214ENST00000642059 1811 ntBASIC5.3□□□□□ -1.56
CTC1Q2NKJ3 UBXN7-201ENST00000296328 10568 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
CTC1Q2NKJ3 UGT8-202ENST00000394511 2448 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
CTC1Q2NKJ3 SLC25A17-202ENST00000402844 2405 ntTSL 2 BASIC5.29□□□□□ -1.56
CTC1Q2NKJ3 RGS17-202ENST00000367225 7773 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
CTC1Q2NKJ3 SNX10-209ENST00000619420 2361 ntAPPRIS ALT1 TSL 5 BASIC5.29□□□□□ -1.56
CTC1Q2NKJ3 RNU6-376P-201ENST00000384731 106 ntBASIC5.29□□□□□ -1.56
CTC1Q2NKJ3 HMGB1P27-201ENST00000431429 603 ntBASIC5.29□□□□□ -1.56
CTC1Q2NKJ3 GEMIN8P3-201ENST00000445417 720 ntBASIC5.29□□□□□ -1.56
CTC1Q2NKJ3 AL365295.1-201ENST00000454942 514 ntTSL 5 BASIC5.29□□□□□ -1.56
CTC1Q2NKJ3 AP000870.1-201ENST00000472927 406 ntBASIC5.29□□□□□ -1.56
CTC1Q2NKJ3 RPL23AP45-201ENST00000476406 468 ntBASIC5.29□□□□□ -1.56
CTC1Q2NKJ3 RPS29P24-201ENST00000486345 171 ntBASIC5.29□□□□□ -1.56
CTC1Q2NKJ3 SUMO2P6-201ENST00000505273 288 ntBASIC5.29□□□□□ -1.56
CTC1Q2NKJ3 ENPP7P9-201ENST00000514456 627 ntBASIC5.29□□□□□ -1.56
CTC1Q2NKJ3 AP001328.1-201ENST00000528550 176 ntBASIC5.29□□□□□ -1.56
CTC1Q2NKJ3 AC005868.1-201ENST00000536421 331 ntBASIC5.29□□□□□ -1.56
CTC1Q2NKJ3 TRAV37-201ENST00000553906 342 ntBASIC5.29□□□□□ -1.56
CTC1Q2NKJ3 AC104002.2-201ENST00000553919 318 ntTSL 5 BASIC5.29□□□□□ -1.56
CTC1Q2NKJ3 AC006349.1-201ENST00000555526 235 ntBASIC5.29□□□□□ -1.56
CTC1Q2NKJ3 MIR3160-1-201ENST00000577972 85 ntBASIC5.29□□□□□ -1.56
CTC1Q2NKJ3 AP000787.2-201ENST00000604432 568 ntBASIC5.29□□□□□ -1.56
CTC1Q2NKJ3 DSCR8-208ENST00000614538 403 ntAPPRIS P5 TSL 5 BASIC5.29□□□□□ -1.56
CTC1Q2NKJ3 MTRR-202ENST00000440940 3215 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
CTC1Q2NKJ3 MTX3-203ENST00000512560 4799 ntTSL 2 BASIC5.29□□□□□ -1.56
CTC1Q2NKJ3 WDR63-203ENST00000370596 2905 ntAPPRIS ALT2 TSL 5 BASIC5.29□□□□□ -1.56
CTC1Q2NKJ3 CNTN5-201ENST00000279463 5925 ntTSL 5 BASIC5.29□□□□□ -1.56
CTC1Q2NKJ3 CEP83-202ENST00000397807 2737 ntTSL 5 BASIC5.29□□□□□ -1.56
CTC1Q2NKJ3 BCLAF1P2-201ENST00000624956 2609 ntBASIC5.28□□□□□ -1.56
CTC1Q2NKJ3 MYBPC1-205ENST00000536007 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC5.28□□□□□ -1.56
CTC1Q2NKJ3 MYBPC1-206ENST00000541119 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC5.28□□□□□ -1.56
CTC1Q2NKJ3 LINC01689-201ENST00000416218 2007 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
CTC1Q2NKJ3 CDON-206ENST00000531738 5803 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
CTC1Q2NKJ3 PEAK1-201ENST00000312493 11512 ntAPPRIS P1 TSL 5 BASIC5.28□□□□□ -1.56
CTC1Q2NKJ3 FOXP2-207ENST00000393494 2664 ntAPPRIS P2 TSL 5 BASIC5.28□□□□□ -1.56
CTC1Q2NKJ3 RIMS2-205ENST00000436393 4384 ntTSL 2 BASIC5.28□□□□□ -1.56
CTC1Q2NKJ3 RNA5SP388-201ENST00000362584 119 ntBASIC5.28□□□□□ -1.56
CTC1Q2NKJ3 RNU6-235P-201ENST00000362644 107 ntBASIC5.28□□□□□ -1.56
CTC1Q2NKJ3 RNU6-1272P-201ENST00000362776 107 ntBASIC5.28□□□□□ -1.56
CTC1Q2NKJ3 RNU6-227P-201ENST00000362865 103 ntBASIC5.28□□□□□ -1.56
CTC1Q2NKJ3 U8.6-201ENST00000364939 135 ntBASIC5.28□□□□□ -1.56
CTC1Q2NKJ3 RNU4-9P-201ENST00000364951 139 ntBASIC5.28□□□□□ -1.56
CTC1Q2NKJ3 AL158823.1-201ENST00000418441 478 ntBASIC5.28□□□□□ -1.56
CTC1Q2NKJ3 AL162386.2-201ENST00000442428 457 ntTSL 3 BASIC5.28□□□□□ -1.56
CTC1Q2NKJ3 AC009296.1-201ENST00000443146 155 ntBASIC5.28□□□□□ -1.56
CTC1Q2NKJ3 RN7SL189P-201ENST00000468631 289 ntBASIC5.28□□□□□ -1.56
CTC1Q2NKJ3 RPS15AP34-201ENST00000487776 387 ntBASIC5.28□□□□□ -1.56
CTC1Q2NKJ3 RPS27AP13-201ENST00000498403 237 ntBASIC5.28□□□□□ -1.56
CTC1Q2NKJ3 HIGD1AP3-201ENST00000515857 278 ntBASIC5.28□□□□□ -1.56
CTC1Q2NKJ3 RNU6-762P-201ENST00000517107 102 ntBASIC5.28□□□□□ -1.56
CTC1Q2NKJ3 AC092747.1-202ENST00000540595 380 ntTSL 5 BASIC5.28□□□□□ -1.56
CTC1Q2NKJ3 LINC02277-202ENST00000556472 453 ntTSL 3 BASIC5.28□□□□□ -1.56
CTC1Q2NKJ3 MIR4275-201ENST00000636486 87 ntBASIC5.28□□□□□ -1.56
CTC1Q2NKJ3 AC068647.2-201ENST00000637380 353 ntBASIC5.28□□□□□ -1.56
CTC1Q2NKJ3 U2SURP-214ENST00000493598 3491 ntTSL 5 BASIC5.28□□□□□ -1.56
CTC1Q2NKJ3 SAMD12-202ENST00000409003 8866 ntAPPRIS P1 TSL 5 BASIC5.28□□□□□ -1.56
CTC1Q2NKJ3 VWC2L-202ENST00000427124 4480 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
CTC1Q2NKJ3 P2RY13-201ENST00000325602 2764 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
CTC1Q2NKJ3 KNTC1-204ENST00000436959 2412 ntTSL 2 BASIC5.28□□□□□ -1.56
CTC1Q2NKJ3 FAP-203ENST00000443424 2598 ntTSL 2 BASIC5.28□□□□□ -1.56
CTC1Q2NKJ3 HTR2B-201ENST00000258400 2246 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
CTC1Q2NKJ3 TFPI-203ENST00000392365 3649 ntAPPRIS P1 TSL 5 BASIC5.28□□□□□ -1.56
CTC1Q2NKJ3 SLCO1C1-201ENST00000266509 3365 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
CTC1Q2NKJ3 IL15-204ENST00000477265 6026 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
CTC1Q2NKJ3 LMO3-201ENST00000261169 3810 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
CTC1Q2NKJ3 ZFPM2-203ENST00000517361 3300 ntTSL 2 BASIC5.27□□□□□ -1.57
CTC1Q2NKJ3 CLVS1-201ENST00000325897 3486 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
CTC1Q2NKJ3 BCLAF1-201ENST00000353331 7110 ntTSL 5 BASIC5.27□□□□□ -1.57
CTC1Q2NKJ3 CTXN2-201ENST00000417307 2828 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
CTC1Q2NKJ3 SPAM1-202ENST00000340011 2349 ntAPPRIS P4 TSL 1 (best) BASIC5.27□□□□□ -1.57
CTC1Q2NKJ3 RNU6-428P-201ENST00000362942 107 ntBASIC5.27□□□□□ -1.57
CTC1Q2NKJ3 RNA5SP515-201ENST00000364570 118 ntBASIC5.27□□□□□ -1.57
CTC1Q2NKJ3 RNU5E-7P-201ENST00000365290 117 ntBASIC5.27□□□□□ -1.57
CTC1Q2NKJ3 Y_RNA.337-201ENST00000365312 102 ntBASIC5.27□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 104.1 ms