Protein–RNA interactions for Protein: P51956

NEK3, Serine/threonine-protein kinase Nek3, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3P51956 AL159987.2-201ENST00000432754 307 ntBASIC3.57□□□□□ -1.84
NEK3P51956 AL117341.1-201ENST00000437213 373 ntTSL 5 BASIC3.57□□□□□ -1.84
NEK3P51956 GTF2IP13-201ENST00000438487 386 ntBASIC3.57□□□□□ -1.84
NEK3P51956 AL138799.4-201ENST00000443939 643 ntTSL 3 BASIC3.57□□□□□ -1.84
NEK3P51956 AL354685.2-201ENST00000448218 1447 ntBASIC3.57□□□□□ -1.84
NEK3P51956 RBMY2UP-201ENST00000453474 324 ntBASIC3.57□□□□□ -1.84
NEK3P51956 BTF3P15-201ENST00000455606 336 ntBASIC3.57□□□□□ -1.84
NEK3P51956 TH2LCRR-203ENST00000457489 439 ntTSL 3 BASIC3.57□□□□□ -1.84
NEK3P51956 SCARNA18-201ENST00000459004 134 ntBASIC3.57□□□□□ -1.84
NEK3P51956 RPS29P12-201ENST00000460178 152 ntBASIC3.57□□□□□ -1.84
NEK3P51956 RN7SL442P-201ENST00000473804 320 ntBASIC3.57□□□□□ -1.84
NEK3P51956 AC113155.1-201ENST00000511141 769 ntBASIC3.57□□□□□ -1.84
NEK3P51956 RNU6-1178P-201ENST00000516674 107 ntBASIC3.57□□□□□ -1.84
NEK3P51956 SNORD60.2-201ENST00000516883 86 ntBASIC3.57□□□□□ -1.84
NEK3P51956 LINC01592-202ENST00000518540 2367 ntTSL 2 BASIC3.57□□□□□ -1.84
NEK3P51956 MTND4P7-201ENST00000523876 130 ntBASIC3.57□□□□□ -1.84
NEK3P51956 AP003033.1-201ENST00000527244 415 ntBASIC3.57□□□□□ -1.84
NEK3P51956 LINC02546-202ENST00000528119 801 ntTSL 5 BASIC3.57□□□□□ -1.84
NEK3P51956 AP001458.1-201ENST00000532626 92 ntTSL 3 BASIC3.57□□□□□ -1.84
NEK3P51956 AC007368.1-201ENST00000536422 974 ntTSL 5 BASIC3.57□□□□□ -1.84
NEK3P51956 PWAR6-201ENST00000552334 4618 ntBASIC3.57□□□□□ -1.84
NEK3P51956 AL513302.2-201ENST00000562313 1842 ntBASIC3.57□□□□□ -1.84
NEK3P51956 AC015917.1-201ENST00000579654 510 ntBASIC3.57□□□□□ -1.84
NEK3P51956 LRRC37A5P-203ENST00000580181 585 ntBASIC3.57□□□□□ -1.84
NEK3P51956 AL589765.7-201ENST00000601684 629 ntTSL 3 BASIC3.57□□□□□ -1.84
NEK3P51956 SRGNP1-201ENST00000603392 451 ntBASIC3.57□□□□□ -1.84
NEK3P51956 AL049781.1-201ENST00000623195 3585 ntBASIC3.57□□□□□ -1.84
NEK3P51956 ATM-203ENST00000452508 12954 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
NEK3P51956 ATP2B1-203ENST00000393164 3127 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
NEK3P51956 AC027514.1-201ENST00000588561 1603 ntBASIC3.56□□□□□ -1.84
NEK3P51956 OR10A7-201ENST00000326258 951 ntAPPRIS P1 BASIC3.56□□□□□ -1.84
NEK3P51956 ZBTB8OSP1-201ENST00000342688 498 ntBASIC3.56□□□□□ -1.84
NEK3P51956 MIR208A-201ENST00000362287 71 ntBASIC3.56□□□□□ -1.84
NEK3P51956 SNORD14B-201ENST00000364533 90 ntBASIC3.56□□□□□ -1.84
NEK3P51956 SNORA70.4-201ENST00000365509 134 ntBASIC3.56□□□□□ -1.84
NEK3P51956 Y_RNA.573-201ENST00000384763 105 ntBASIC3.56□□□□□ -1.84
NEK3P51956 MIR34B-201ENST00000385076 84 ntBASIC3.56□□□□□ -1.84
NEK3P51956 RNU6-648P-201ENST00000410190 107 ntBASIC3.56□□□□□ -1.84
NEK3P51956 RNU6-607P-201ENST00000411283 108 ntBASIC3.56□□□□□ -1.84
NEK3P51956 USP9YP27-201ENST00000418455 438 ntBASIC3.56□□□□□ -1.84
NEK3P51956 ARL5AP1-201ENST00000418991 388 ntBASIC3.56□□□□□ -1.84
NEK3P51956 DBIP2-201ENST00000419076 262 ntBASIC3.56□□□□□ -1.84
NEK3P51956 EIF1P1-201ENST00000421436 341 ntBASIC3.56□□□□□ -1.84
NEK3P51956 AC007566.1-201ENST00000427458 643 ntTSL 5 BASIC3.56□□□□□ -1.84
NEK3P51956 AL445488.1-202ENST00000430623 545 ntTSL 3 BASIC3.56□□□□□ -1.84
NEK3P51956 ATP5JP1-201ENST00000431631 322 ntBASIC3.56□□□□□ -1.84
NEK3P51956 AL583835.2-201ENST00000435483 500 ntTSL 2 BASIC3.56□□□□□ -1.84
NEK3P51956 TRAPPC2P3-201ENST00000443200 321 ntBASIC3.56□□□□□ -1.84
NEK3P51956 AC092802.2-202ENST00000444665 371 ntTSL 5 BASIC3.56□□□□□ -1.84
NEK3P51956 Z99127.3-201ENST00000448158 395 ntBASIC3.56□□□□□ -1.84
NEK3P51956 AL583843.1-201ENST00000456070 346 ntBASIC3.56□□□□□ -1.84
NEK3P51956 MTAPP1-201ENST00000489154 819 ntBASIC3.56□□□□□ -1.84
NEK3P51956 LINC02198-202ENST00000505371 526 ntTSL 5 BASIC3.56□□□□□ -1.84
NEK3P51956 SLC7A11-AS1-201ENST00000510066 817 ntTSL 2 BASIC3.56□□□□□ -1.84
NEK3P51956 AC074344.1-201ENST00000512823 224 ntBASIC3.56□□□□□ -1.84
NEK3P51956 MIR892C-201ENST00000516410 77 ntBASIC3.56□□□□□ -1.84
NEK3P51956 AC136777.1-201ENST00000517765 369 ntTSL 4 BASIC3.56□□□□□ -1.84
NEK3P51956 AC104211.1-202ENST00000521307 866 ntTSL 3 BASIC3.56□□□□□ -1.84
NEK3P51956 ZDHHC20P3-201ENST00000531576 336 ntBASIC3.56□□□□□ -1.84
NEK3P51956 AP000786.1-201ENST00000541092 581 ntTSL 4 BASIC3.56□□□□□ -1.84
NEK3P51956 MDM2-233ENST00000545204 398 ntTSL 5 BASIC3.56□□□□□ -1.84
NEK3P51956 AL512791.1-201ENST00000555853 300 ntTSL 3 BASIC3.56□□□□□ -1.84
NEK3P51956 AC015908.4-201ENST00000582334 575 ntTSL 4 BASIC3.56□□□□□ -1.84
NEK3P51956 MIR4424-201ENST00000585257 86 ntBASIC3.56□□□□□ -1.84
NEK3P51956 AC011477.3-201ENST00000585571 403 ntTSL 5 BASIC3.56□□□□□ -1.84
NEK3P51956 LINC01897-203ENST00000591503 369 ntTSL 2 BASIC3.56□□□□□ -1.84
NEK3P51956 uc_338.34-201ENST00000617467 174 ntBASIC3.56□□□□□ -1.84
NEK3P51956 MIR7975-201ENST00000619350 68 ntBASIC3.56□□□□□ -1.84
NEK3P51956 U4.6-201ENST00000621618 127 ntBASIC3.56□□□□□ -1.84
NEK3P51956 AC022418.1-201ENST00000624118 445 ntBASIC3.56□□□□□ -1.84
NEK3P51956 FER-210ENST00000628534 558 ntTSL 5 BASIC3.56□□□□□ -1.84
NEK3P51956 SNORA50A-202ENST00000629536 136 ntBASIC3.56□□□□□ -1.84
NEK3P51956 OXR1-207ENST00000497705 2007 ntTSL 2 BASIC3.56□□□□□ -1.84
NEK3P51956 ZNF826P-207ENST00000622273 1910 ntBASIC3.56□□□□□ -1.84
NEK3P51956 HELZ-201ENST00000358691 13810 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
NEK3P51956 SYNE1-201ENST00000341594 26584 ntAPPRIS ALT2 TSL 5 BASIC3.55□□□□□ -1.84
NEK3P51956 MTRNR2L10-201ENST00000545075 1530 ntAPPRIS P1 BASIC3.55□□□□□ -1.84
NEK3P51956 C6orf10-202ENST00000375015 2173 ntAPPRIS ALT2 TSL 5 BASIC3.55□□□□□ -1.84
NEK3P51956 AC093908.1-201ENST00000623125 8092 ntBASIC3.55□□□□□ -1.84
NEK3P51956 ANGPTL1-201ENST00000234816 3348 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
NEK3P51956 LINC01545-201ENST00000377879 521 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
NEK3P51956 Z98749.2-208ENST00000381646 500 ntBASIC3.55□□□□□ -1.84
NEK3P51956 RNU6-483P-201ENST00000384088 108 ntBASIC3.55□□□□□ -1.84
NEK3P51956 AC004014.1-201ENST00000413406 538 ntTSL 4 BASIC3.55□□□□□ -1.84
NEK3P51956 AC092660.1-201ENST00000420648 371 ntTSL 2 BASIC3.55□□□□□ -1.84
NEK3P51956 RPS3AP44-201ENST00000425466 790 ntBASIC3.55□□□□□ -1.84
NEK3P51956 TOMM20P4-201ENST00000427861 435 ntBASIC3.55□□□□□ -1.84
NEK3P51956 AP000907.1-201ENST00000428428 510 ntBASIC3.55□□□□□ -1.84
NEK3P51956 AF124730.1-201ENST00000430001 327 ntTSL 2 BASIC3.55□□□□□ -1.84
NEK3P51956 AC000111.3-201ENST00000433478 193 ntBASIC3.55□□□□□ -1.84
NEK3P51956 AC007879.3-202ENST00000448786 823 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
NEK3P51956 AC004888.1-201ENST00000450480 547 ntTSL 2 BASIC3.55□□□□□ -1.84
NEK3P51956 AC092567.1-201ENST00000452397 251 ntTSL 3 BASIC3.55□□□□□ -1.84
NEK3P51956 AC011005.2-201ENST00000487324 359 ntBASIC3.55□□□□□ -1.84
NEK3P51956 PLCXD2-AS1-201ENST00000493131 491 ntTSL 3 BASIC3.55□□□□□ -1.84
NEK3P51956 AC008539.1-201ENST00000507653 482 ntTSL 3 BASIC3.55□□□□□ -1.84
NEK3P51956 AC016556.1-201ENST00000510004 935 ntTSL 2 BASIC3.55□□□□□ -1.84
NEK3P51956 RNU4-29P-201ENST00000515943 174 ntBASIC3.55□□□□□ -1.84
NEK3P51956 RNU2-27P-201ENST00000516185 142 ntBASIC3.55□□□□□ -1.84
NEK3P51956 MS4A4E-206ENST00000528394 555 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 91.2 ms