Protein–RNA interactions for Protein: P51784

USP11, Ubiquitin carboxyl-terminal hydrolase 11, humanhuman

Predictions only

Length 963 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP11P51784 ZNF285B-201ENST00000561698 1767 ntBASIC4.73□□□□□ -1.65
USP11P51784 LRRC6-212ENST00000618342 1754 ntAPPRIS ALT1 TSL 5 BASIC4.73□□□□□ -1.65
USP11P51784 PRLR-217ENST00000618457 11688 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
USP11P51784 GMNC-201ENST00000442080 3422 ntAPPRIS P1 TSL 5 BASIC4.73□□□□□ -1.65
USP11P51784 FAM35A-202ENST00000298786 3614 ntTSL 5 BASIC4.73□□□□□ -1.65
USP11P51784 CCDC102B-201ENST00000360242 2711 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
USP11P51784 RNU6-817P-201ENST00000391083 104 ntBASIC4.73□□□□□ -1.65
USP11P51784 RPS26P8-201ENST00000393490 348 ntBASIC4.73□□□□□ -1.65
USP11P51784 RNA5SP56-201ENST00000410277 118 ntBASIC4.73□□□□□ -1.65
USP11P51784 PPP1R11P2-201ENST00000423543 382 ntBASIC4.73□□□□□ -1.65
USP11P51784 AC004975.1-201ENST00000428733 208 ntBASIC4.73□□□□□ -1.65
USP11P51784 AC004866.2-201ENST00000438285 481 ntBASIC4.73□□□□□ -1.65
USP11P51784 AC034195.1-202ENST00000451031 610 ntTSL 3 BASIC4.73□□□□□ -1.65
USP11P51784 LINC01753-201ENST00000458145 631 ntTSL 3 BASIC4.73□□□□□ -1.65
USP11P51784 LINC01206-205ENST00000490001 949 ntTSL 5 BASIC4.73□□□□□ -1.65
USP11P51784 SNRPGP16-201ENST00000533275 226 ntBASIC4.73□□□□□ -1.65
USP11P51784 AC022655.2-201ENST00000577280 318 ntBASIC4.73□□□□□ -1.65
USP11P51784 AC004147.3-201ENST00000577709 375 ntTSL 3 BASIC4.73□□□□□ -1.65
USP11P51784 AL355812.1-201ENST00000603215 216 ntBASIC4.73□□□□□ -1.65
USP11P51784 AL355877.2-201ENST00000603670 358 ntBASIC4.73□□□□□ -1.65
USP11P51784 SNORD39.4-201ENST00000620099 78 ntBASIC4.73□□□□□ -1.65
USP11P51784 AL450472.1-202ENST00000637286 180 ntBASIC4.73□□□□□ -1.65
USP11P51784 AL807742.1-203ENST00000637444 759 ntTSL 5 BASIC4.73□□□□□ -1.65
USP11P51784 CFTR-201ENST00000003084 6132 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
USP11P51784 CDK14-201ENST00000265741 4953 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
USP11P51784 SLC25A17-202ENST00000402844 2405 ntTSL 2 BASIC4.73□□□□□ -1.65
USP11P51784 CPNE8-202ENST00000360449 1757 ntAPPRIS ALT2 TSL 2 BASIC4.73□□□□□ -1.65
USP11P51784 APAF1-208ENST00000549007 3492 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
USP11P51784 MIR335-201ENST00000362173 94 ntBASIC4.72□□□□□ -1.65
USP11P51784 Y_RNA.65-201ENST00000362846 100 ntBASIC4.72□□□□□ -1.65
USP11P51784 snoU2_19.2-201ENST00000363024 80 ntBASIC4.72□□□□□ -1.65
USP11P51784 U8.8-201ENST00000365399 135 ntBASIC4.72□□□□□ -1.65
USP11P51784 MIR3074-201ENST00000384885 81 ntBASIC4.72□□□□□ -1.65
USP11P51784 TRAV9-2-201ENST00000390441 394 ntAPPRIS P1 BASIC4.72□□□□□ -1.65
USP11P51784 AL603910.2-201ENST00000407268 136 ntBASIC4.72□□□□□ -1.65
USP11P51784 AL139156.1-201ENST00000412785 841 ntBASIC4.72□□□□□ -1.65
USP11P51784 SSXP9-201ENST00000417503 292 ntBASIC4.72□□□□□ -1.65
USP11P51784 AC007349.1-201ENST00000419326 587 ntTSL 4 BASIC4.72□□□□□ -1.65
USP11P51784 HLA-N-201ENST00000437516 135 ntBASIC4.72□□□□□ -1.65
USP11P51784 AL050349.1-201ENST00000441029 401 ntTSL 2 BASIC4.72□□□□□ -1.65
USP11P51784 RNU6-953P-201ENST00000459154 107 ntBASIC4.72□□□□□ -1.65
USP11P51784 RPL23AP2-201ENST00000471227 466 ntBASIC4.72□□□□□ -1.65
USP11P51784 BCL2L15-204ENST00000471267 267 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
USP11P51784 AC098851.1-201ENST00000476561 570 ntTSL 4 BASIC4.72□□□□□ -1.65
USP11P51784 S100A11P1-201ENST00000477525 312 ntBASIC4.72□□□□□ -1.65
USP11P51784 AL159163.1-201ENST00000507747 600 ntAPPRIS P1 TSL 5 BASIC4.72□□□□□ -1.65
USP11P51784 AC006499.6-201ENST00000511169 607 ntBASIC4.72□□□□□ -1.65
USP11P51784 RNU6-914P-201ENST00000516749 109 ntBASIC4.72□□□□□ -1.65
USP11P51784 KIRREL3-AS2-201ENST00000532988 492 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
USP11P51784 LINC01479-202ENST00000546170 444 ntTSL 2 BASIC4.72□□□□□ -1.65
USP11P51784 AL161713.1-201ENST00000555538 145 ntBASIC4.72□□□□□ -1.65
USP11P51784 OR4H12P-201ENST00000556269 907 ntBASIC4.72□□□□□ -1.65
USP11P51784 AL133279.1-202ENST00000556789 456 ntTSL 5 BASIC4.72□□□□□ -1.65
USP11P51784 MIR5692A1-201ENST00000580523 69 ntBASIC4.72□□□□□ -1.65
USP11P51784 AC011524.1-201ENST00000590167 240 ntTSL 3 BASIC4.72□□□□□ -1.65
USP11P51784 AC015911.9-201ENST00000591634 185 ntTSL 5 BASIC4.72□□□□□ -1.65
USP11P51784 AC015813.4-201ENST00000610469 179 ntBASIC4.72□□□□□ -1.65
USP11P51784 FP236240.3-201ENST00000623061 327 ntBASIC4.72□□□□□ -1.65
USP11P51784 AC127459.3-201ENST00000624328 466 ntBASIC4.72□□□□□ -1.65
USP11P51784 VPS13C-202ENST00000261517 13400 ntAPPRIS ALT2 TSL 1 (best) BASIC4.72□□□□□ -1.65
USP11P51784 CHL1-216ENST00000620033 7311 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
USP11P51784 SLAIN2-205ENST00000512093 4219 ntTSL 5 BASIC4.72□□□□□ -1.65
USP11P51784 PLCB4-206ENST00000414679 3947 ntAPPRIS ALT1 TSL 5 BASIC4.72□□□□□ -1.65
USP11P51784 MS4A1-201ENST00000345732 3331 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
USP11P51784 TAB3-204ENST00000378932 3698 ntTSL 1 (best) BASIC4.71□□□□□ -1.65
USP11P51784 DMXL2-202ENST00000449909 7465 ntAPPRIS ALT2 TSL 1 (best) BASIC4.71□□□□□ -1.65
USP11P51784 AC005183.1-201ENST00000603687 1979 ntBASIC4.71□□□□□ -1.66
USP11P51784 RLIMP1-201ENST00000339626 1680 ntBASIC4.71□□□□□ -1.66
USP11P51784 AC096751.1-201ENST00000515178 2202 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
USP11P51784 RNA5SP479-201ENST00000364858 117 ntBASIC4.71□□□□□ -1.66
USP11P51784 RNU6-662P-201ENST00000384253 104 ntBASIC4.71□□□□□ -1.66
USP11P51784 RPL17P36-201ENST00000420302 549 ntBASIC4.71□□□□□ -1.66
USP11P51784 AC092423.1-201ENST00000430165 186 ntBASIC4.71□□□□□ -1.66
USP11P51784 AC006011.1-201ENST00000442758 349 ntBASIC4.71□□□□□ -1.66
USP11P51784 NDUFS5P3-201ENST00000450668 321 ntBASIC4.71□□□□□ -1.66
USP11P51784 NUTF2P7-201ENST00000453086 375 ntBASIC4.71□□□□□ -1.66
USP11P51784 APOA2-210ENST00000491350 263 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
USP11P51784 RN7SKP21-201ENST00000516503 220 ntBASIC4.71□□□□□ -1.66
USP11P51784 RNU6-911P-201ENST00000516523 104 ntBASIC4.71□□□□□ -1.66
USP11P51784 LINC02459-201ENST00000551761 474 ntTSL 3 BASIC4.71□□□□□ -1.66
USP11P51784 CYP4A43P-201ENST00000568156 121 ntBASIC4.71□□□□□ -1.66
USP11P51784 AC123912.5-201ENST00000605470 343 ntBASIC4.71□□□□□ -1.66
USP11P51784 AC103858.1-201ENST00000607019 476 ntTSL 3 BASIC4.71□□□□□ -1.66
USP11P51784 AC023043.4-201ENST00000612081 449 ntBASIC4.71□□□□□ -1.66
USP11P51784 SMAD5-AS1_4.1-201ENST00000615561 167 ntBASIC4.71□□□□□ -1.66
USP11P51784 MIR7151-201ENST00000617477 60 ntBASIC4.71□□□□□ -1.66
USP11P51784 AC068724.3-201ENST00000625906 87 ntBASIC4.71□□□□□ -1.66
USP11P51784 CYP3A43-217ENST00000631161 328 ntTSL 5 BASIC4.71□□□□□ -1.66
USP11P51784 UBE2D3-233ENST00000618836 3472 ntAPPRIS ALT1 TSL 5 BASIC4.71□□□□□ -1.66
USP11P51784 COPS2-202ENST00000388901 6628 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
USP11P51784 SLC5A12-202ENST00000396005 6250 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
USP11P51784 ZNF404-202ENST00000587539 1851 ntAPPRIS P2 TSL 5 BASIC4.71□□□□□ -1.66
USP11P51784 RANBP2-201ENST00000283195 11711 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
USP11P51784 GABRA1-220ENST00000638159 4088 ntTSL 5 BASIC4.7□□□□□ -1.66
USP11P51784 AL391987.6-201ENST00000305671 199 ntBASIC4.7□□□□□ -1.66
USP11P51784 RNU6-263P-201ENST00000363811 107 ntBASIC4.7□□□□□ -1.66
USP11P51784 Y_RNA.269-201ENST00000364685 89 ntBASIC4.7□□□□□ -1.66
USP11P51784 Y_RNA.464-201ENST00000384282 110 ntBASIC4.7□□□□□ -1.66
USP11P51784 Y_RNA.534-201ENST00000384599 112 ntBASIC4.7□□□□□ -1.66
USP11P51784 AL022722.2-201ENST00000402519 180 ntBASIC4.7□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 128 ms