Protein–RNA interactions for Protein: P43307

SSR1, Translocon-associated protein subunit alpha, humanhuman

Known RBP Predictions only

Length 286 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1P43307 AL024508.1-201ENST00000432477 505 ntTSL 2 BASIC2.27□□□□□ -2.05
SSR1P43307 AC023590.1-204ENST00000434023 431 ntTSL 5 BASIC2.27□□□□□ -2.05
SSR1P43307 KCNJ6-AS1-201ENST00000435001 357 ntTSL 5 BASIC2.27□□□□□ -2.05
SSR1P43307 AL117336.1-201ENST00000439198 380 ntTSL 2 BASIC2.27□□□□□ -2.05
SSR1P43307 AC013267.1-201ENST00000458227 267 ntBASIC2.27□□□□□ -2.05
SSR1P43307 PTPRG-AS1-202ENST00000466893 823 ntTSL 4 BASIC2.27□□□□□ -2.05
SSR1P43307 TMEM132D-AS1-202ENST00000510001 293 ntTSL 1 (best) BASIC2.27□□□□□ -2.05
SSR1P43307 AP006587.4-201ENST00000526053 529 ntBASIC2.27□□□□□ -2.05
SSR1P43307 AP003122.3-201ENST00000526316 255 ntBASIC2.27□□□□□ -2.05
SSR1P43307 DEFB108A-201ENST00000530110 222 ntBASIC2.27□□□□□ -2.05
SSR1P43307 AC118273.2-201ENST00000532092 465 ntBASIC2.27□□□□□ -2.05
SSR1P43307 CBX3P7-201ENST00000532876 502 ntBASIC2.27□□□□□ -2.05
SSR1P43307 LINC02294-201ENST00000549330 497 ntTSL 2 BASIC2.27□□□□□ -2.05
SSR1P43307 OR11H5P-201ENST00000554039 926 ntBASIC2.27□□□□□ -2.05
SSR1P43307 PCLAF-207ENST00000559519 749 ntTSL 2 BASIC2.27□□□□□ -2.05
SSR1P43307 AC087286.1-201ENST00000560712 568 ntTSL 3 BASIC2.27□□□□□ -2.05
SSR1P43307 AC136618.2-201ENST00000575091 400 ntBASIC2.27□□□□□ -2.05
SSR1P43307 LINC02210-208ENST00000585118 546 ntTSL 1 (best) BASIC2.27□□□□□ -2.05
SSR1P43307 BNIP3P40-201ENST00000596017 556 ntBASIC2.27□□□□□ -2.05
SSR1P43307 VN1R82P-201ENST00000601481 356 ntBASIC2.27□□□□□ -2.05
SSR1P43307 AF131215.7-201ENST00000602443 707 ntBASIC2.27□□□□□ -2.05
SSR1P43307 AC021755.4-201ENST00000616620 456 ntBASIC2.27□□□□□ -2.05
SSR1P43307 AC244517.12-201ENST00000623581 663 ntBASIC2.27□□□□□ -2.05
SSR1P43307 AC079416.3-201ENST00000624479 549 ntBASIC2.27□□□□□ -2.05
SSR1P43307 IGHVIII-44-202ENST00000636235 289 ntBASIC2.27□□□□□ -2.05
SSR1P43307 VPS54-202ENST00000354504 3594 ntTSL 1 (best) BASIC2.27□□□□□ -2.05
SSR1P43307 ATP13A3-201ENST00000256031 7322 ntAPPRIS P1 TSL 5 BASIC2.27□□□□□ -2.05
SSR1P43307 AC103710.2-202ENST00000641454 2853 ntBASIC2.27□□□□□ -2.05
SSR1P43307 HAS2-201ENST00000303924 4190 ntAPPRIS P1 TSL 1 (best) BASIC2.27□□□□□ -2.05
SSR1P43307 ZNF876P-202ENST00000398732 1485 ntBASIC2.26□□□□□ -2.05
SSR1P43307 AC104454.1-201ENST00000421341 1401 ntBASIC2.26□□□□□ -2.05
SSR1P43307 AC008555.8-201ENST00000623602 2168 ntBASIC2.26□□□□□ -2.05
SSR1P43307 SPAG11A-202ENST00000326625 445 ntTSL 5 BASIC2.26□□□□□ -2.05
SSR1P43307 TRAJ11-201ENST00000390526 60 ntAPPRIS P1 BASIC2.26□□□□□ -2.05
SSR1P43307 SNORA11.4-201ENST00000408823 129 ntBASIC2.26□□□□□ -2.05
SSR1P43307 RNU4-53P-201ENST00000410828 140 ntBASIC2.26□□□□□ -2.05
SSR1P43307 AC010731.2-201ENST00000415275 440 ntTSL 3 BASIC2.26□□□□□ -2.05
SSR1P43307 HMGB1P49-201ENST00000418882 569 ntBASIC2.26□□□□□ -2.05
SSR1P43307 AC005005.2-201ENST00000420779 380 ntBASIC2.26□□□□□ -2.05
SSR1P43307 AC098831.1-201ENST00000440661 216 ntBASIC2.26□□□□□ -2.05
SSR1P43307 AL135787.1-201ENST00000450154 302 ntTSL 3 BASIC2.26□□□□□ -2.05
SSR1P43307 AC092001.1-201ENST00000453012 261 ntBASIC2.26□□□□□ -2.05
SSR1P43307 Z98749.1-201ENST00000454123 541 ntTSL 5 BASIC2.26□□□□□ -2.05
SSR1P43307 LINC01075-201ENST00000455977 370 ntTSL 3 BASIC2.26□□□□□ -2.05
SSR1P43307 AC093110.1-201ENST00000456363 602 ntTSL 2 BASIC2.26□□□□□ -2.05
SSR1P43307 AC004263.1-201ENST00000479327 332 ntBASIC2.26□□□□□ -2.05
SSR1P43307 SUB1-211ENST00000512913 684 ntAPPRIS P1 TSL 2 BASIC2.26□□□□□ -2.05
SSR1P43307 UTP23-205ENST00000520733 369 ntTSL 3 BASIC2.26□□□□□ -2.05
SSR1P43307 AC011611.4-201ENST00000547721 779 ntTSL 2 BASIC2.26□□□□□ -2.05
SSR1P43307 AC008741.1-201ENST00000569456 510 ntTSL 3 BASIC2.26□□□□□ -2.05
SSR1P43307 ROCK1P1-201ENST00000573767 549 ntBASIC2.26□□□□□ -2.05
SSR1P43307 AL391001.1-201ENST00000602747 715 ntBASIC2.26□□□□□ -2.05
SSR1P43307 AL391813.1-201ENST00000603098 260 ntBASIC2.26□□□□□ -2.05
SSR1P43307 AC005034.5-201ENST00000604219 466 ntBASIC2.26□□□□□ -2.05
SSR1P43307 AC007363.1-201ENST00000604736 620 ntBASIC2.26□□□□□ -2.05
SSR1P43307 AL355297.2-201ENST00000604792 129 ntBASIC2.26□□□□□ -2.05
SSR1P43307 AP000860.1-201ENST00000605250 559 ntBASIC2.26□□□□□ -2.05
SSR1P43307 DUSP12P1-201ENST00000612874 516 ntBASIC2.26□□□□□ -2.05
SSR1P43307 DLEU1_2.1-201ENST00000617920 342 ntBASIC2.26□□□□□ -2.05
SSR1P43307 AC025048.6-202ENST00000627667 438 ntBASIC2.26□□□□□ -2.05
SSR1P43307 PYGO1-201ENST00000302000 8488 ntTSL 1 (best) BASIC2.26□□□□□ -2.05
SSR1P43307 MCF2-204ENST00000414978 3813 ntAPPRIS ALT2 TSL 5 BASIC2.25□□□□□ -2.05
SSR1P43307 SLC25A46-206ENST00000509432 1596 ntTSL 2 BASIC2.25□□□□□ -2.05
SSR1P43307 RNU6-660P-201ENST00000364566 109 ntBASIC2.25□□□□□ -2.05
SSR1P43307 RABGGTB-202ENST00000370826 512 ntTSL 2 BASIC2.25□□□□□ -2.05
SSR1P43307 RNU6-1083P-201ENST00000384022 107 ntBASIC2.25□□□□□ -2.05
SSR1P43307 Y_RNA.510-201ENST00000384511 114 ntBASIC2.25□□□□□ -2.05
SSR1P43307 HMGB1P11-201ENST00000413899 637 ntBASIC2.25□□□□□ -2.05
SSR1P43307 AL008987.1-201ENST00000415528 237 ntBASIC2.25□□□□□ -2.05
SSR1P43307 AL162726.4-201ENST00000422010 673 ntTSL 5 BASIC2.25□□□□□ -2.05
SSR1P43307 AC244035.3-201ENST00000428399 271 ntTSL 2 BASIC2.25□□□□□ -2.05
SSR1P43307 SMG7-AS1-202ENST00000432837 466 ntTSL 3 BASIC2.25□□□□□ -2.05
SSR1P43307 AL161651.1-201ENST00000440882 223 ntBASIC2.25□□□□□ -2.05
SSR1P43307 HMGN2P10-201ENST00000448085 265 ntBASIC2.25□□□□□ -2.05
SSR1P43307 LINC00374-201ENST00000454780 800 ntTSL 3 BASIC2.25□□□□□ -2.05
SSR1P43307 LINC02540-201ENST00000455554 570 ntTSL 3 BASIC2.25□□□□□ -2.05
SSR1P43307 AC092264.1-201ENST00000456002 713 ntTSL 5 BASIC2.25□□□□□ -2.05
SSR1P43307 AL157373.1-201ENST00000456036 276 ntTSL 3 BASIC2.25□□□□□ -2.05
SSR1P43307 SCEL-AS1-201ENST00000456280 493 ntTSL 3 BASIC2.25□□□□□ -2.05
SSR1P43307 AC092620.2-201ENST00000458007 744 ntTSL 2 BASIC2.25□□□□□ -2.05
SSR1P43307 RNU6-717P-201ENST00000459076 104 ntBASIC2.25□□□□□ -2.05
SSR1P43307 AP001324.2-201ENST00000461163 319 ntBASIC2.25□□□□□ -2.05
SSR1P43307 AC117522.2-201ENST00000510049 657 ntBASIC2.25□□□□□ -2.05
SSR1P43307 AC110751.1-201ENST00000511916 462 ntTSL 3 BASIC2.25□□□□□ -2.05
SSR1P43307 RNA5SP200-201ENST00000516360 103 ntBASIC2.25□□□□□ -2.05
SSR1P43307 AP003123.1-201ENST00000526041 333 ntTSL 2 BASIC2.25□□□□□ -2.05
SSR1P43307 AC087276.1-201ENST00000529659 480 ntBASIC2.25□□□□□ -2.05
SSR1P43307 AC092747.1-202ENST00000540595 380 ntTSL 5 BASIC2.25□□□□□ -2.05
SSR1P43307 AC123904.2-201ENST00000548059 300 ntBASIC2.25□□□□□ -2.05
SSR1P43307 ARL2BPP2-201ENST00000550907 489 ntBASIC2.25□□□□□ -2.05
SSR1P43307 AC007151.1-201ENST00000572774 483 ntBASIC2.25□□□□□ -2.05
SSR1P43307 AC090897.2-201ENST00000581715 130 ntBASIC2.25□□□□□ -2.05
SSR1P43307 NRBF2P1-201ENST00000587407 859 ntBASIC2.25□□□□□ -2.05
SSR1P43307 AC091152.3-201ENST00000604227 325 ntBASIC2.25□□□□□ -2.05
SSR1P43307 TRIQK-204ENST00000517858 1882 ntTSL 3 BASIC2.24□□□□□ -2.05
SSR1P43307 OR13G1-202ENST00000642119 2568 ntAPPRIS P1 BASIC2.24□□□□□ -2.05
SSR1P43307 RNU5A-8P-201ENST00000364102 114 ntBASIC2.24□□□□□ -2.05
SSR1P43307 MIR513B-201ENST00000385136 84 ntBASIC2.24□□□□□ -2.05
SSR1P43307 TRDJ3-201ENST00000390476 59 ntAPPRIS P1 BASIC2.24□□□□□ -2.05
SSR1P43307 AL021407.1-201ENST00000404531 386 ntBASIC2.24□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 99 ms