Protein–RNA interactions for Protein: O75131

CPNE3, Copine-3, humanhuman

Known RBP Predictions only

Length 537 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3O75131 C2CD6-204ENST00000450242 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC4.54□□□□□ -1.68
CPNE3O75131 CSPP1-201ENST00000262210 4367 ntAPPRIS P3 TSL 1 (best) BASIC4.54□□□□□ -1.68
CPNE3O75131 RNU4-9P-201ENST00000364951 139 ntBASIC4.54□□□□□ -1.68
CPNE3O75131 RNU6-898P-201ENST00000365627 104 ntBASIC4.54□□□□□ -1.68
CPNE3O75131 LY6G5C-210ENST00000383237 674 ntAPPRIS P2 TSL 1 (best) BASIC4.54□□□□□ -1.68
CPNE3O75131 Y_RNA.439-201ENST00000384119 94 ntBASIC4.54□□□□□ -1.68
CPNE3O75131 TRAV9-2-201ENST00000390441 394 ntAPPRIS P1 BASIC4.54□□□□□ -1.68
CPNE3O75131 AC096920.1-201ENST00000423991 241 ntBASIC4.54□□□□□ -1.68
CPNE3O75131 RPL21P40-201ENST00000428586 483 ntBASIC4.54□□□□□ -1.68
CPNE3O75131 ZBTB40-IT1-201ENST00000438551 273 ntTSL 3 BASIC4.54□□□□□ -1.68
CPNE3O75131 TOMM22P6-201ENST00000465035 409 ntBASIC4.54□□□□□ -1.68
CPNE3O75131 AC023141.12-201ENST00000512399 199 ntBASIC4.54□□□□□ -1.68
CPNE3O75131 AC108043.1-201ENST00000512696 574 ntBASIC4.54□□□□□ -1.68
CPNE3O75131 Y_RNA.713-201ENST00000517013 96 ntBASIC4.54□□□□□ -1.68
CPNE3O75131 MIR2355-201ENST00000517199 87 ntBASIC4.54□□□□□ -1.68
CPNE3O75131 RN7SKP92-201ENST00000517266 244 ntBASIC4.54□□□□□ -1.68
CPNE3O75131 AL356133.2-201ENST00000521572 371 ntTSL 3 BASIC4.54□□□□□ -1.68
CPNE3O75131 AP006287.2-201ENST00000529036 502 ntTSL 2 BASIC4.54□□□□□ -1.68
CPNE3O75131 AP002770.2-201ENST00000543613 532 ntBASIC4.54□□□□□ -1.68
CPNE3O75131 AC093023.1-201ENST00000547375 507 ntBASIC4.54□□□□□ -1.68
CPNE3O75131 MIR5699-201ENST00000578903 90 ntBASIC4.54□□□□□ -1.68
CPNE3O75131 UBE2E2-207ENST00000628311 267 ntTSL 5 BASIC4.54□□□□□ -1.68
CPNE3O75131 SNCA-213ENST00000618500 3022 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
CPNE3O75131 TLK1P1-201ENST00000456760 2440 ntBASIC4.54□□□□□ -1.68
CPNE3O75131 MYOZ2-201ENST00000307128 2597 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
CPNE3O75131 DDX20-202ENST00000475700 4332 ntTSL 2 BASIC4.53□□□□□ -1.68
CPNE3O75131 CSRNP3-201ENST00000314499 11788 ntAPPRIS P1 TSL 5 BASIC4.53□□□□□ -1.68
CPNE3O75131 TMEM71-210ENST00000523829 1974 ntAPPRIS ALT2 TSL 5 BASIC4.53□□□□□ -1.68
CPNE3O75131 CENPE-208ENST00000611174 8260 ntTSL 5 BASIC4.53□□□□□ -1.68
CPNE3O75131 NLRP11-202ENST00000589824 3231 ntAPPRIS ALT2 TSL 5 BASIC4.53□□□□□ -1.68
CPNE3O75131 Y_RNA.84-201ENST00000363011 104 ntBASIC4.53□□□□□ -1.68
CPNE3O75131 RNA5SP167-201ENST00000365461 116 ntBASIC4.53□□□□□ -1.68
CPNE3O75131 RNY3P4-201ENST00000384428 101 ntBASIC4.53□□□□□ -1.68
CPNE3O75131 RNU2-71P-201ENST00000411395 189 ntBASIC4.53□□□□□ -1.68
CPNE3O75131 RAC1P3-201ENST00000416129 580 ntBASIC4.53□□□□□ -1.68
CPNE3O75131 AC069079.1-201ENST00000419889 400 ntTSL 3 BASIC4.53□□□□□ -1.68
CPNE3O75131 HMGN2P30-201ENST00000423237 256 ntBASIC4.53□□□□□ -1.68
CPNE3O75131 AL591043.1-201ENST00000432461 424 ntBASIC4.53□□□□□ -1.68
CPNE3O75131 AC004875.1-201ENST00000432702 378 ntTSL 3 BASIC4.53□□□□□ -1.68
CPNE3O75131 INTS6-AS1-201ENST00000434512 466 ntTSL 3 BASIC4.53□□□□□ -1.68
CPNE3O75131 Z82188.1-201ENST00000436709 154 ntBASIC4.53□□□□□ -1.68
CPNE3O75131 AL161618.1-201ENST00000438738 761 ntTSL 5 BASIC4.53□□□□□ -1.68
CPNE3O75131 FO393401.1-201ENST00000453914 600 ntTSL 3 BASIC4.53□□□□□ -1.68
CPNE3O75131 snoU13.30-201ENST00000458951 104 ntBASIC4.53□□□□□ -1.68
CPNE3O75131 snoU13.1-201ENST00000459157 104 ntBASIC4.53□□□□□ -1.68
CPNE3O75131 AC073073.1-201ENST00000493920 463 ntBASIC4.53□□□□□ -1.68
CPNE3O75131 ARHGEF3-AS1-202ENST00000495939 336 ntTSL 3 BASIC4.53□□□□□ -1.68
CPNE3O75131 AC069360.1-201ENST00000503469 431 ntTSL 2 BASIC4.53□□□□□ -1.68
CPNE3O75131 HMGB3P17-201ENST00000504195 649 ntBASIC4.53□□□□□ -1.68
CPNE3O75131 AC091868.1-201ENST00000508746 304 ntBASIC4.53□□□□□ -1.68
CPNE3O75131 AC011396.2-202ENST00000511390 375 ntTSL 3 BASIC4.53□□□□□ -1.68
CPNE3O75131 RN7SKP272-201ENST00000516988 232 ntBASIC4.53□□□□□ -1.68
CPNE3O75131 RNU6-709P-201ENST00000517257 104 ntBASIC4.53□□□□□ -1.68
CPNE3O75131 IGKV2-23-201ENST00000518729 323 ntBASIC4.53□□□□□ -1.68
CPNE3O75131 SYF2P1-201ENST00000550658 413 ntBASIC4.53□□□□□ -1.68
CPNE3O75131 MIR4284-201ENST00000578924 81 ntBASIC4.53□□□□□ -1.68
CPNE3O75131 AC209154.1-201ENST00000582156 337 ntBASIC4.53□□□□□ -1.68
CPNE3O75131 RNF138P2-201ENST00000603490 592 ntBASIC4.53□□□□□ -1.68
CPNE3O75131 AC005696.2-201ENST00000610120 626 ntTSL 3 BASIC4.53□□□□□ -1.68
CPNE3O75131 MIR6810-201ENST00000622701 70 ntBASIC4.53□□□□□ -1.68
CPNE3O75131 OR4C16-201ENST00000623907 933 ntAPPRIS P1 BASIC4.53□□□□□ -1.68
CPNE3O75131 RNF123-214ENST00000629802 207 ntTSL 5 BASIC4.53□□□□□ -1.68
CPNE3O75131 AL109837.2-201ENST00000632608 295 ntTSL 3 BASIC4.53□□□□□ -1.68
CPNE3O75131 U2.21-201ENST00000637295 81 ntBASIC4.53□□□□□ -1.68
CPNE3O75131 AC241585.2-209ENST00000638217 143 ntBASIC4.53□□□□□ -1.68
CPNE3O75131 USP44-201ENST00000258499 4022 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
CPNE3O75131 PRG4-202ENST00000367483 4921 ntTSL 5 BASIC4.53□□□□□ -1.68
CPNE3O75131 CEP192-203ENST00000506447 7960 ntAPPRIS P2 TSL 5 BASIC4.53□□□□□ -1.68
CPNE3O75131 CACNB4-273ENST00000638091 4061 ntTSL 5 BASIC4.53□□□□□ -1.68
CPNE3O75131 MRE11-202ENST00000323977 2588 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
CPNE3O75131 OR1C1-202ENST00000641256 3719 ntAPPRIS P1 BASIC4.52□□□□□ -1.69
CPNE3O75131 MS4A1-201ENST00000345732 3331 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
CPNE3O75131 ARHGAP42P3-201ENST00000443989 2508 ntBASIC4.52□□□□□ -1.69
CPNE3O75131 FAM197Y9-201ENST00000451062 2332 ntTSL 5 BASIC4.52□□□□□ -1.69
CPNE3O75131 OR6P1-202ENST00000641540 3255 ntAPPRIS P1 BASIC4.52□□□□□ -1.69
CPNE3O75131 AC092435.4-201ENST00000623012 4159 ntBASIC4.52□□□□□ -1.69
CPNE3O75131 OXR1-206ENST00000449762 2621 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
CPNE3O75131 LATS1-201ENST00000253339 4256 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
CPNE3O75131 ATP7A-201ENST00000341514 8483 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
CPNE3O75131 RNU1-108P-201ENST00000362556 161 ntBASIC4.52□□□□□ -1.69
CPNE3O75131 RNU6-968P-201ENST00000384076 107 ntBASIC4.52□□□□□ -1.69
CPNE3O75131 SNORA70F-201ENST00000384142 135 ntBASIC4.52□□□□□ -1.69
CPNE3O75131 RNU4-70P-201ENST00000384579 139 ntBASIC4.52□□□□□ -1.69
CPNE3O75131 MIR518D-201ENST00000385014 87 ntBASIC4.52□□□□□ -1.69
CPNE3O75131 DEFB130A-201ENST00000400079 240 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
CPNE3O75131 RNA5SP129-201ENST00000410276 118 ntBASIC4.52□□□□□ -1.69
CPNE3O75131 RN7SKP267-201ENST00000410381 285 ntBASIC4.52□□□□□ -1.69
CPNE3O75131 RNU6-1203P-201ENST00000410703 110 ntBASIC4.52□□□□□ -1.69
CPNE3O75131 RNU2-64P-201ENST00000411315 191 ntBASIC4.52□□□□□ -1.69
CPNE3O75131 AL358453.1-201ENST00000422522 250 ntBASIC4.52□□□□□ -1.69
CPNE3O75131 DEFB130B-201ENST00000437818 240 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
CPNE3O75131 RPL37P4-201ENST00000448908 268 ntBASIC4.52□□□□□ -1.69
CPNE3O75131 LINC01032-201ENST00000451690 276 ntTSL 5 BASIC4.52□□□□□ -1.69
CPNE3O75131 U8.22-201ENST00000459141 133 ntBASIC4.52□□□□□ -1.69
CPNE3O75131 RPL7AP28-201ENST00000464513 571 ntBASIC4.52□□□□□ -1.69
CPNE3O75131 AC095059.1-201ENST00000502570 349 ntTSL 5 BASIC4.52□□□□□ -1.69
CPNE3O75131 RNA5SP468-201ENST00000516782 93 ntBASIC4.52□□□□□ -1.69
CPNE3O75131 OOSP2-203ENST00000532905 496 ntAPPRIS ALT2 TSL 3 BASIC4.52□□□□□ -1.69
CPNE3O75131 MRPS36P4-201ENST00000534436 298 ntBASIC4.52□□□□□ -1.69
CPNE3O75131 LINC01479-202ENST00000546170 444 ntTSL 2 BASIC4.52□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 106.8 ms