Protein–RNA interactions for Protein: Q9Y3P4

RHBDD3, Rhomboid domain-containing protein 3, humanhuman

Predictions only

Length 386 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDD3Q9Y3P4 FABP5P13-201ENST00000452144 328 ntBASIC1.89□□□□□ -2.11
RHBDD3Q9Y3P4 AC109486.1-201ENST00000486833 374 ntBASIC1.89□□□□□ -2.11
RHBDD3Q9Y3P4 AC104629.1-201ENST00000494226 508 ntBASIC1.89□□□□□ -2.11
RHBDD3Q9Y3P4 AC093281.2-201ENST00000510153 597 ntBASIC1.89□□□□□ -2.11
RHBDD3Q9Y3P4 RNU6-581P-201ENST00000516214 105 ntBASIC1.89□□□□□ -2.11
RHBDD3Q9Y3P4 ACA59.2-201ENST00000517061 156 ntBASIC1.89□□□□□ -2.11
RHBDD3Q9Y3P4 LINC01608-201ENST00000523557 544 ntTSL 4 BASIC1.89□□□□□ -2.11
RHBDD3Q9Y3P4 AC010183.2-202ENST00000546791 382 ntTSL 3 BASIC1.89□□□□□ -2.11
RHBDD3Q9Y3P4 PSMA3P-201ENST00000555485 635 ntBASIC1.89□□□□□ -2.11
RHBDD3Q9Y3P4 AC012170.2-201ENST00000560380 667 ntTSL 3 BASIC1.89□□□□□ -2.11
RHBDD3Q9Y3P4 AC217774.1-201ENST00000578936 517 ntTSL 4 BASIC1.89□□□□□ -2.11
RHBDD3Q9Y3P4 LRRC37A5P-203ENST00000580181 585 ntBASIC1.89□□□□□ -2.11
RHBDD3Q9Y3P4 MIR4293-201ENST00000584305 78 ntBASIC1.89□□□□□ -2.11
RHBDD3Q9Y3P4 AC104763.2-201ENST00000604179 382 ntBASIC1.89□□□□□ -2.11
RHBDD3Q9Y3P4 AC090970.3-201ENST00000612566 866 ntBASIC1.89□□□□□ -2.11
RHBDD3Q9Y3P4 AC103710.2-202ENST00000641454 2853 ntBASIC1.89□□□□□ -2.11
RHBDD3Q9Y3P4 OR13G1-202ENST00000642119 2568 ntAPPRIS P1 BASIC1.89□□□□□ -2.11
RHBDD3Q9Y3P4 XRCC4-205ENST00000511817 1636 ntAPPRIS P4 TSL 1 (best) BASIC1.88□□□□□ -2.11
RHBDD3Q9Y3P4 SLITRK6-201ENST00000400286 4318 ntAPPRIS P1 TSL 1 (best) BASIC1.88□□□□□ -2.11
RHBDD3Q9Y3P4 AP000776.1-201ENST00000530032 1663 ntBASIC1.88□□□□□ -2.11
RHBDD3Q9Y3P4 RNU6-301P-201ENST00000384277 107 ntBASIC1.88□□□□□ -2.11
RHBDD3Q9Y3P4 HMGN2P39-201ENST00000398005 273 ntBASIC1.88□□□□□ -2.11
RHBDD3Q9Y3P4 RNU4-53P-201ENST00000410828 140 ntBASIC1.88□□□□□ -2.11
RHBDD3Q9Y3P4 MTATP6P20-201ENST00000414147 562 ntBASIC1.88□□□□□ -2.11
RHBDD3Q9Y3P4 AL353689.1-201ENST00000438895 199 ntBASIC1.88□□□□□ -2.11
RHBDD3Q9Y3P4 AC007003.1-202ENST00000439318 349 ntTSL 5 BASIC1.88□□□□□ -2.11
RHBDD3Q9Y3P4 FAM103A2P-201ENST00000444122 354 ntBASIC1.88□□□□□ -2.11
RHBDD3Q9Y3P4 RPL23AP7-203ENST00000449021 469 ntBASIC1.88□□□□□ -2.11
RHBDD3Q9Y3P4 AC091770.1-201ENST00000456513 373 ntTSL 2 BASIC1.88□□□□□ -2.11
RHBDD3Q9Y3P4 RNU6-717P-201ENST00000459076 104 ntBASIC1.88□□□□□ -2.11
RHBDD3Q9Y3P4 RPL39P36-201ENST00000490784 156 ntBASIC1.88□□□□□ -2.11
RHBDD3Q9Y3P4 AC139453.3-201ENST00000493276 369 ntBASIC1.88□□□□□ -2.11
RHBDD3Q9Y3P4 AC106872.3-201ENST00000495104 446 ntBASIC1.88□□□□□ -2.11
RHBDD3Q9Y3P4 AC098799.1-201ENST00000504752 800 ntBASIC1.88□□□□□ -2.11
RHBDD3Q9Y3P4 AKIRIN2P1-201ENST00000505898 352 ntBASIC1.88□□□□□ -2.11
RHBDD3Q9Y3P4 AC116655.1-201ENST00000508324 901 ntBASIC1.88□□□□□ -2.11
RHBDD3Q9Y3P4 RNU5B-3P-201ENST00000516601 115 ntBASIC1.88□□□□□ -2.11
RHBDD3Q9Y3P4 AC090796.1-201ENST00000520370 567 ntTSL 4 BASIC1.88□□□□□ -2.11
RHBDD3Q9Y3P4 DEFB108A-201ENST00000530110 222 ntBASIC1.88□□□□□ -2.11
RHBDD3Q9Y3P4 IAPP-204ENST00000539393 409 ntAPPRIS P1 TSL 2 BASIC1.88□□□□□ -2.11
RHBDD3Q9Y3P4 AC123905.1-201ENST00000552098 541 ntTSL 4 BASIC1.88□□□□□ -2.11
RHBDD3Q9Y3P4 LINC00933-203ENST00000559812 219 ntBASIC1.88□□□□□ -2.11
RHBDD3Q9Y3P4 AC092953.2-201ENST00000608000 699 ntBASIC1.88□□□□□ -2.11
RHBDD3Q9Y3P4 AC005296.1-201ENST00000616145 209 ntBASIC1.88□□□□□ -2.11
RHBDD3Q9Y3P4 LINC01002-202ENST00000631412 459 ntTSL 5 BASIC1.88□□□□□ -2.11
RHBDD3Q9Y3P4 SCN7A-201ENST00000409855 7183 ntAPPRIS P1 TSL 1 (best) BASIC1.88□□□□□ -2.11
RHBDD3Q9Y3P4 MTND5P6-201ENST00000422338 1798 ntBASIC1.87□□□□□ -2.11
RHBDD3Q9Y3P4 RNU5A-8P-201ENST00000364102 114 ntBASIC1.87□□□□□ -2.11
RHBDD3Q9Y3P4 XGY1-201ENST00000381172 446 ntBASIC1.87□□□□□ -2.11
RHBDD3Q9Y3P4 CD80-202ENST00000383669 771 ntTSL 1 (best) BASIC1.87□□□□□ -2.11
RHBDD3Q9Y3P4 Y_RNA.465-201ENST00000384293 102 ntBASIC1.87□□□□□ -2.11
RHBDD3Q9Y3P4 MIR634-201ENST00000385208 97 ntBASIC1.87□□□□□ -2.11
RHBDD3Q9Y3P4 AL136310.1-201ENST00000404926 654 ntBASIC1.87□□□□□ -2.11
RHBDD3Q9Y3P4 BTF3P7-201ENST00000407097 488 ntBASIC1.87□□□□□ -2.11
RHBDD3Q9Y3P4 AL035415.1-201ENST00000447150 289 ntTSL 5 BASIC1.87□□□□□ -2.11
RHBDD3Q9Y3P4 PMCHL2-203ENST00000457791 237 ntBASIC1.87□□□□□ -2.11
RHBDD3Q9Y3P4 AL137847.2-201ENST00000458111 527 ntTSL 3 BASIC1.87□□□□□ -2.11
RHBDD3Q9Y3P4 LINC01995-201ENST00000489016 621 ntTSL 3 BASIC1.87□□□□□ -2.11
RHBDD3Q9Y3P4 AC023194.1-201ENST00000493084 308 ntBASIC1.87□□□□□ -2.11
RHBDD3Q9Y3P4 EPGN-208ENST00000509145 222 ntTSL 1 (best) BASIC1.87□□□□□ -2.11
RHBDD3Q9Y3P4 AC117522.2-201ENST00000510049 657 ntBASIC1.87□□□□□ -2.11
RHBDD3Q9Y3P4 AC091965.2-201ENST00000512324 613 ntBASIC1.87□□□□□ -2.11
RHBDD3Q9Y3P4 RNA5SP200-201ENST00000516360 103 ntBASIC1.87□□□□□ -2.11
RHBDD3Q9Y3P4 LINC01938-201ENST00000521341 1864 ntTSL 2 BASIC1.87□□□□□ -2.11
RHBDD3Q9Y3P4 MS4A4E-204ENST00000526086 460 ntTSL 1 (best) BASIC1.87□□□□□ -2.11
RHBDD3Q9Y3P4 AC011611.4-201ENST00000547721 779 ntTSL 2 BASIC1.87□□□□□ -2.11
RHBDD3Q9Y3P4 AL450442.1-201ENST00000554042 854 ntTSL 1 (best) BASIC1.87□□□□□ -2.11
RHBDD3Q9Y3P4 MEG8-218ENST00000556720 456 ntTSL 3 BASIC1.87□□□□□ -2.11
RHBDD3Q9Y3P4 AC012378.1-201ENST00000561155 364 ntTSL 3 BASIC1.87□□□□□ -2.11
RHBDD3Q9Y3P4 BNIP3P9-201ENST00000603714 553 ntBASIC1.87□□□□□ -2.11
RHBDD3Q9Y3P4 AC087045.1-201ENST00000605856 382 ntBASIC1.87□□□□□ -2.11
RHBDD3Q9Y3P4 AC034229.4-201ENST00000607861 441 ntBASIC1.87□□□□□ -2.11
RHBDD3Q9Y3P4 AC017037.3-201ENST00000625016 472 ntBASIC1.87□□□□□ -2.11
RHBDD3Q9Y3P4 MARCH7-203ENST00000409591 2147 ntTSL 2 BASIC1.87□□□□□ -2.11
RHBDD3Q9Y3P4 IDE-201ENST00000265986 5877 ntAPPRIS P1 TSL 1 (best) BASIC1.86□□□□□ -2.11
RHBDD3Q9Y3P4 RNU4-82P-201ENST00000362443 140 ntBASIC1.86□□□□□ -2.11
RHBDD3Q9Y3P4 RNU1-72P-201ENST00000362976 153 ntBASIC1.86□□□□□ -2.11
RHBDD3Q9Y3P4 RNA5SP37-201ENST00000365420 130 ntBASIC1.86□□□□□ -2.11
RHBDD3Q9Y3P4 U8.14-201ENST00000390843 143 ntBASIC1.86□□□□□ -2.11
RHBDD3Q9Y3P4 RNU6-1000P-201ENST00000391066 106 ntBASIC1.86□□□□□ -2.11
RHBDD3Q9Y3P4 MDM2-208ENST00000393410 732 ntTSL 1 (best) BASIC1.86□□□□□ -2.11
RHBDD3Q9Y3P4 MDM2-210ENST00000393413 657 ntTSL 1 (best) BASIC1.86□□□□□ -2.11
RHBDD3Q9Y3P4 MRLN-201ENST00000414264 422 ntAPPRIS P2 TSL 1 (best) BASIC1.86□□□□□ -2.11
RHBDD3Q9Y3P4 AC012370.1-201ENST00000419244 530 ntTSL 3 BASIC1.86□□□□□ -2.11
RHBDD3Q9Y3P4 AC005005.2-201ENST00000420779 380 ntBASIC1.86□□□□□ -2.11
RHBDD3Q9Y3P4 AL139413.1-201ENST00000421309 217 ntBASIC1.86□□□□□ -2.11
RHBDD3Q9Y3P4 AL354936.1-201ENST00000441521 649 ntTSL 5 BASIC1.86□□□□□ -2.11
RHBDD3Q9Y3P4 AC073174.1-201ENST00000444155 415 ntTSL 5 BASIC1.86□□□□□ -2.11
RHBDD3Q9Y3P4 RPL23AP3-201ENST00000453844 468 ntBASIC1.86□□□□□ -2.11
RHBDD3Q9Y3P4 AL356272.1-201ENST00000454538 832 ntTSL 2 BASIC1.86□□□□□ -2.11
RHBDD3Q9Y3P4 RNU6-953P-201ENST00000459154 107 ntBASIC1.86□□□□□ -2.11
RHBDD3Q9Y3P4 AC055855.1-201ENST00000489563 579 ntBASIC1.86□□□□□ -2.11
RHBDD3Q9Y3P4 AC084117.1-201ENST00000496975 270 ntTSL 5 BASIC1.86□□□□□ -2.11
RHBDD3Q9Y3P4 AC021146.8-201ENST00000507455 733 ntBASIC1.86□□□□□ -2.11
RHBDD3Q9Y3P4 AC116353.3-201ENST00000511215 249 ntBASIC1.86□□□□□ -2.11
RHBDD3Q9Y3P4 HTN1-204ENST00000511674 623 ntAPPRIS P1 TSL 2 BASIC1.86□□□□□ -2.11
RHBDD3Q9Y3P4 CD44-AS1-201ENST00000528869 587 ntTSL 4 BASIC1.86□□□□□ -2.11
RHBDD3Q9Y3P4 AP003498.1-201ENST00000532530 347 ntTSL 3 BASIC1.86□□□□□ -2.11
RHBDD3Q9Y3P4 AL133166.1-201ENST00000551040 1034 ntTSL 4 BASIC1.86□□□□□ -2.11
RHBDD3Q9Y3P4 AC026271.5-201ENST00000577873 130 ntBASIC1.86□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 126.8 ms