Protein–RNA interactions for Protein: Q9NQV7

PRDM9, Histone-lysine N-methyltransferase PRDM9, humanhuman

Predictions only

Length 894 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM9Q9NQV7 RNA5SP487-201ENST00000410186 122 ntBASIC5.12□□□□□ -1.59
PRDM9Q9NQV7 AL355433.1-201ENST00000422804 300 ntBASIC5.12□□□□□ -1.59
PRDM9Q9NQV7 RNU7-107P-201ENST00000459121 61 ntBASIC5.12□□□□□ -1.59
PRDM9Q9NQV7 RPL30P12-201ENST00000474666 353 ntBASIC5.12□□□□□ -1.59
PRDM9Q9NQV7 AC098976.1-201ENST00000513014 541 ntBASIC5.12□□□□□ -1.59
PRDM9Q9NQV7 RNU5E-3P-201ENST00000515913 68 ntBASIC5.12□□□□□ -1.59
PRDM9Q9NQV7 Y_RNA.694-201ENST00000516677 117 ntBASIC5.12□□□□□ -1.59
PRDM9Q9NQV7 NACAP3-201ENST00000552100 481 ntBASIC5.12□□□□□ -1.59
PRDM9Q9NQV7 CYCSP39-201ENST00000565821 309 ntBASIC5.12□□□□□ -1.59
PRDM9Q9NQV7 ZNF561-AS1-207ENST00000591932 676 ntTSL 5 BASIC5.12□□□□□ -1.59
PRDM9Q9NQV7 MIR6837-201ENST00000620884 64 ntBASIC5.12□□□□□ -1.59
PRDM9Q9NQV7 RACGAP1-202ENST00000427314 3229 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
PRDM9Q9NQV7 ZNF347-201ENST00000334197 7960 ntAPPRIS P3 TSL 1 (best) BASIC5.12□□□□□ -1.59
PRDM9Q9NQV7 PCDH11X-202ENST00000361655 4126 ntAPPRIS ALT2 TSL 1 (best) BASIC5.12□□□□□ -1.59
PRDM9Q9NQV7 STARD9-201ENST00000290607 15567 ntAPPRIS P1 TSL 5 BASIC5.12□□□□□ -1.59
PRDM9Q9NQV7 AC104964.3-201ENST00000606115 2860 ntBASIC5.12□□□□□ -1.59
PRDM9Q9NQV7 EXPH5-201ENST00000265843 10187 ntAPPRIS P3 TSL 1 (best) BASIC5.12□□□□□ -1.59
PRDM9Q9NQV7 TNRC6B-201ENST00000301923 15958 ntAPPRIS P3 TSL 5 BASIC5.12□□□□□ -1.59
PRDM9Q9NQV7 DGKH-210ENST00000628433 3449 ntTSL 2 BASIC5.11□□□□□ -1.59
PRDM9Q9NQV7 LIMA1-212ENST00000552491 2652 ntAPPRIS ALT2 TSL 2 BASIC5.11□□□□□ -1.59
PRDM9Q9NQV7 ARHGAP5-206ENST00000539826 4881 ntAPPRIS P3 TSL 1 (best) BASIC5.11□□□□□ -1.59
PRDM9Q9NQV7 GVINP1-202ENST00000531871 7271 ntBASIC5.11□□□□□ -1.59
PRDM9Q9NQV7 RAD17-208ENST00000380774 2117 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
PRDM9Q9NQV7 WDR49-207ENST00000479765 2108 ntTSL 2 BASIC5.11□□□□□ -1.59
PRDM9Q9NQV7 CRISPLD1-205ENST00000523524 2100 ntTSL 2 BASIC5.11□□□□□ -1.59
PRDM9Q9NQV7 PP2D1-202ENST00000389050 2151 ntAPPRIS P1 TSL 5 BASIC5.11□□□□□ -1.59
PRDM9Q9NQV7 ADGRG4-202ENST00000394141 8971 ntAPPRIS ALT2 TSL 1 (best) BASIC5.11□□□□□ -1.59
PRDM9Q9NQV7 IL7R-201ENST00000303115 4626 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
PRDM9Q9NQV7 CFAP70-203ENST00000355577 3691 ntTSL 5 BASIC5.11□□□□□ -1.59
PRDM9Q9NQV7 AC103740.1-201ENST00000558888 7427 ntTSL 2 BASIC5.11□□□□□ -1.59
PRDM9Q9NQV7 RAPGEF4-213ENST00000535187 3707 ntTSL 2 BASIC5.11□□□□□ -1.59
PRDM9Q9NQV7 RNU1-19P-201ENST00000363306 165 ntBASIC5.11□□□□□ -1.59
PRDM9Q9NQV7 RNA5SP335-201ENST00000363817 110 ntBASIC5.11□□□□□ -1.59
PRDM9Q9NQV7 RNU6-1141P-201ENST00000364520 107 ntBASIC5.11□□□□□ -1.59
PRDM9Q9NQV7 SNORA70.6-201ENST00000383934 134 ntBASIC5.11□□□□□ -1.59
PRDM9Q9NQV7 TRAJ40-201ENST00000390497 61 ntAPPRIS P1 BASIC5.11□□□□□ -1.59
PRDM9Q9NQV7 RNA5SP296-201ENST00000410523 111 ntBASIC5.11□□□□□ -1.59
PRDM9Q9NQV7 SRSF1P1-201ENST00000424058 520 ntBASIC5.11□□□□□ -1.59
PRDM9Q9NQV7 AL590383.1-201ENST00000428602 75 ntBASIC5.11□□□□□ -1.59
PRDM9Q9NQV7 RPS11P7-201ENST00000442125 465 ntBASIC5.11□□□□□ -1.59
PRDM9Q9NQV7 AL691497.1-201ENST00000443270 449 ntTSL 2 BASIC5.11□□□□□ -1.59
PRDM9Q9NQV7 AL592431.1-201ENST00000451090 317 ntTSL 3 BASIC5.11□□□□□ -1.59
PRDM9Q9NQV7 U8.19-201ENST00000459095 133 ntBASIC5.11□□□□□ -1.59
PRDM9Q9NQV7 OR2AO1P-201ENST00000476497 403 ntBASIC5.11□□□□□ -1.59
PRDM9Q9NQV7 KC877373.1-201ENST00000479066 408 ntBASIC5.11□□□□□ -1.59
PRDM9Q9NQV7 AC090281.1-201ENST00000523019 276 ntBASIC5.11□□□□□ -1.59
PRDM9Q9NQV7 AC021231.3-201ENST00000558497 370 ntBASIC5.11□□□□□ -1.59
PRDM9Q9NQV7 AC008794.2-201ENST00000587779 293 ntTSL 2 BASIC5.11□□□□□ -1.59
PRDM9Q9NQV7 AC092364.1-202ENST00000593824 565 ntTSL 4 BASIC5.11□□□□□ -1.59
PRDM9Q9NQV7 AC006380.1-201ENST00000603598 186 ntBASIC5.11□□□□□ -1.59
PRDM9Q9NQV7 IGLCOR22-2-201ENST00000605398 313 ntBASIC5.11□□□□□ -1.59
PRDM9Q9NQV7 AC244107.2-201ENST00000611773 76 ntBASIC5.11□□□□□ -1.59
PRDM9Q9NQV7 LINC01002-202ENST00000631412 459 ntTSL 5 BASIC5.11□□□□□ -1.59
PRDM9Q9NQV7 OR10G7-202ENST00000641585 3449 ntAPPRIS P1 BASIC5.11□□□□□ -1.59
PRDM9Q9NQV7 KRR1-201ENST00000229214 10118 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
PRDM9Q9NQV7 AF127577.6-201ENST00000623352 2191 ntBASIC5.11□□□□□ -1.59
PRDM9Q9NQV7 SDR42E1-201ENST00000328945 11566 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
PRDM9Q9NQV7 SLC26A7-208ENST00000523719 2902 ntAPPRIS P1 TSL 2 BASIC5.1□□□□□ -1.59
PRDM9Q9NQV7 CLVS1-205ENST00000519846 3622 ntAPPRIS P1 TSL 5 BASIC5.1□□□□□ -1.59
PRDM9Q9NQV7 ZNF571-201ENST00000328550 4113 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
PRDM9Q9NQV7 CDK14-203ENST00000406263 5163 ntAPPRIS ALT2 TSL 1 (best) BASIC5.1□□□□□ -1.59
PRDM9Q9NQV7 PRUNE2-204ENST00000376718 12584 ntAPPRIS P3 TSL 5 BASIC5.1□□□□□ -1.59
PRDM9Q9NQV7 TET2-203ENST00000380013 9679 ntAPPRIS P2 TSL 5 BASIC5.1□□□□□ -1.59
PRDM9Q9NQV7 RN7SKP153-201ENST00000365026 316 ntBASIC5.1□□□□□ -1.59
PRDM9Q9NQV7 Y_RNA.329-201ENST00000365209 107 ntBASIC5.1□□□□□ -1.59
PRDM9Q9NQV7 ADGRL2-209ENST00000370727 5164 ntTSL 5 BASIC5.1□□□□□ -1.59
PRDM9Q9NQV7 RNU6-643P-201ENST00000384018 107 ntBASIC5.1□□□□□ -1.59
PRDM9Q9NQV7 RNU6-245P-201ENST00000384020 107 ntBASIC5.1□□□□□ -1.59
PRDM9Q9NQV7 RNU6-793P-201ENST00000384233 104 ntBASIC5.1□□□□□ -1.59
PRDM9Q9NQV7 SNORA16A-201ENST00000384342 137 ntBASIC5.1□□□□□ -1.59
PRDM9Q9NQV7 MIR616-201ENST00000385293 97 ntBASIC5.1□□□□□ -1.59
PRDM9Q9NQV7 RNU1-77P-201ENST00000390868 162 ntBASIC5.1□□□□□ -1.59
PRDM9Q9NQV7 MTERF4-204ENST00000406593 802 ntTSL 2 BASIC5.1□□□□□ -1.59
PRDM9Q9NQV7 RN7SKP229-201ENST00000410465 302 ntBASIC5.1□□□□□ -1.59
PRDM9Q9NQV7 ELOCP21-201ENST00000412558 336 ntBASIC5.1□□□□□ -1.59
PRDM9Q9NQV7 AC006461.1-201ENST00000412637 326 ntBASIC5.1□□□□□ -1.59
PRDM9Q9NQV7 SNRPEP9-201ENST00000436794 238 ntBASIC5.1□□□□□ -1.59
PRDM9Q9NQV7 AC023424.1-201ENST00000496058 459 ntBASIC5.1□□□□□ -1.59
PRDM9Q9NQV7 UBE2CP3-201ENST00000502715 450 ntBASIC5.1□□□□□ -1.59
PRDM9Q9NQV7 AC113383.1-204ENST00000507060 552 ntTSL 3 BASIC5.1□□□□□ -1.59
PRDM9Q9NQV7 RNU4ATAC18P-201ENST00000516179 126 ntBASIC5.1□□□□□ -1.59
PRDM9Q9NQV7 AC136628.3-201ENST00000521868 290 ntBASIC5.1□□□□□ -1.59
PRDM9Q9NQV7 HMGB1P40-201ENST00000525121 540 ntBASIC5.1□□□□□ -1.59
PRDM9Q9NQV7 TRAV28-201ENST00000557548 323 ntBASIC5.1□□□□□ -1.59
PRDM9Q9NQV7 AC011444.3-201ENST00000588342 325 ntTSL 3 BASIC5.1□□□□□ -1.59
PRDM9Q9NQV7 AC107031.1-201ENST00000604939 347 ntTSL 2 BASIC5.1□□□□□ -1.59
PRDM9Q9NQV7 AC090132.2-201ENST00000615881 347 ntBASIC5.1□□□□□ -1.59
PRDM9Q9NQV7 DNAJC16-210ENST00000616884 5882 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
PRDM9Q9NQV7 SMAD5-AS1_2.1-201ENST00000617906 131 ntBASIC5.1□□□□□ -1.59
PRDM9Q9NQV7 MIR3674-201ENST00000636576 68 ntBASIC5.1□□□□□ -1.59
PRDM9Q9NQV7 AC074101.1-201ENST00000637861 241 ntBASIC5.1□□□□□ -1.59
PRDM9Q9NQV7 MLH3-210ENST00000556257 4229 ntTSL 5 BASIC5.1□□□□□ -1.59
PRDM9Q9NQV7 ETV1-203ENST00000403527 3363 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
PRDM9Q9NQV7 LINC01541-202ENST00000568095 3105 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
PRDM9Q9NQV7 ARHGAP18-201ENST00000368149 4462 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
PRDM9Q9NQV7 AASDH-201ENST00000205214 3590 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
PRDM9Q9NQV7 SMC2-AS1-201ENST00000603487 7020 ntTSL 2 BASIC5.09□□□□□ -1.59
PRDM9Q9NQV7 ZNF562-201ENST00000293648 12380 ntTSL 2 BASIC5.09□□□□□ -1.59
PRDM9Q9NQV7 FAM196B-201ENST00000377365 2999 ntAPPRIS P1 TSL 2 BASIC5.09□□□□□ -1.59
PRDM9Q9NQV7 AC092268.1-201ENST00000342691 405 ntBASIC5.09□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 102.6 ms