Protein–RNA interactions for Protein: Q9NP77

SSU72, RNA polymerase II subunit A C-terminal domain phosphatase SSU72, humanhuman

Known RBP Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72Q9NP77 MS4A4E-201ENST00000398984 479 ntTSL 5 BASIC4.4□□□□□ -1.71
SSU72Q9NP77 AL117337.1-201ENST00000412789 444 ntTSL 3 BASIC4.4□□□□□ -1.71
SSU72Q9NP77 LINC00894-201ENST00000413076 403 ntTSL 3 BASIC4.4□□□□□ -1.71
SSU72Q9NP77 AC079790.1-201ENST00000420365 507 ntTSL 3 BASIC4.4□□□□□ -1.71
SSU72Q9NP77 MS4A4E-203ENST00000425663 350 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
SSU72Q9NP77 AC010975.1-201ENST00000443301 669 ntTSL 3 BASIC4.4□□□□□ -1.71
SSU72Q9NP77 FO393401.1-201ENST00000453914 600 ntTSL 3 BASIC4.4□□□□□ -1.71
SSU72Q9NP77 ATP5LP3-201ENST00000514223 304 ntBASIC4.4□□□□□ -1.71
SSU72Q9NP77 SNORA31.6-201ENST00000516241 130 ntBASIC4.4□□□□□ -1.71
SSU72Q9NP77 RNU6-1338P-201ENST00000516328 91 ntBASIC4.4□□□□□ -1.71
SSU72Q9NP77 AC109466.1-204ENST00000519570 717 ntTSL 3 BASIC4.4□□□□□ -1.71
SSU72Q9NP77 AC015468.4-201ENST00000523496 568 ntTSL 4 BASIC4.4□□□□□ -1.71
SSU72Q9NP77 AP002770.2-201ENST00000543613 532 ntBASIC4.4□□□□□ -1.71
SSU72Q9NP77 SYF2P1-201ENST00000550658 413 ntBASIC4.4□□□□□ -1.71
SSU72Q9NP77 AL132712.2-201ENST00000556653 127 ntTSL 3 BASIC4.4□□□□□ -1.71
SSU72Q9NP77 AC120057.2-201ENST00000571520 271 ntBASIC4.4□□□□□ -1.71
SSU72Q9NP77 B3GNTL1P2-201ENST00000603673 288 ntBASIC4.4□□□□□ -1.71
SSU72Q9NP77 CCL14-204ENST00000622526 472 ntTSL 3 BASIC4.4□□□□□ -1.71
SSU72Q9NP77 AC243829.7-201ENST00000633081 225 ntBASIC4.4□□□□□ -1.71
SSU72Q9NP77 EVI2A-201ENST00000247270 1860 ntAPPRIS P3 TSL 2 BASIC4.4□□□□□ -1.71
SSU72Q9NP77 EIF2A-201ENST00000273435 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC4.4□□□□□ -1.71
SSU72Q9NP77 AC027290.2-201ENST00000623210 18662 ntBASIC4.4□□□□□ -1.71
SSU72Q9NP77 POLR2B-201ENST00000314595 3748 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
SSU72Q9NP77 DSG2-AS1-202ENST00000583706 2024 ntTSL 5 BASIC4.39□□□□□ -1.71
SSU72Q9NP77 ZNF254-202ENST00000357002 3967 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
SSU72Q9NP77 ANO3-202ENST00000525139 3257 ntAPPRIS ALT1 TSL 5 BASIC4.39□□□□□ -1.71
SSU72Q9NP77 ASNSP1-201ENST00000518311 1939 ntBASIC4.39□□□□□ -1.71
SSU72Q9NP77 U8.4-201ENST00000363626 134 ntBASIC4.39□□□□□ -1.71
SSU72Q9NP77 Y_RNA.541-201ENST00000384640 113 ntBASIC4.39□□□□□ -1.71
SSU72Q9NP77 AL592466.1-201ENST00000428346 307 ntTSL 5 BASIC4.39□□□□□ -1.71
SSU72Q9NP77 AL627311.1-201ENST00000431514 115 ntBASIC4.39□□□□□ -1.71
SSU72Q9NP77 AL121760.1-201ENST00000447206 346 ntTSL 2 BASIC4.39□□□□□ -1.71
SSU72Q9NP77 AC006517.1-201ENST00000480485 328 ntBASIC4.39□□□□□ -1.71
SSU72Q9NP77 AC093270.2-201ENST00000486157 792 ntBASIC4.39□□□□□ -1.71
SSU72Q9NP77 AC139453.3-201ENST00000493276 369 ntBASIC4.39□□□□□ -1.71
SSU72Q9NP77 RPS23P5-201ENST00000495419 428 ntBASIC4.39□□□□□ -1.71
SSU72Q9NP77 AL359273.1-201ENST00000510918 627 ntBASIC4.39□□□□□ -1.71
SSU72Q9NP77 AC010420.1-201ENST00000515077 509 ntTSL 3 BASIC4.39□□□□□ -1.71
SSU72Q9NP77 AC021713.1-201ENST00000526554 510 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
SSU72Q9NP77 AP001880.2-201ENST00000538233 448 ntBASIC4.39□□□□□ -1.71
SSU72Q9NP77 EDDM3DP-201ENST00000554692 434 ntBASIC4.39□□□□□ -1.71
SSU72Q9NP77 AC023034.1-201ENST00000558141 518 ntTSL 3 BASIC4.39□□□□□ -1.71
SSU72Q9NP77 LINC00511-212ENST00000581183 657 ntTSL 3 BASIC4.39□□□□□ -1.71
SSU72Q9NP77 UTP20-201ENST00000261637 9025 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
SSU72Q9NP77 SEL1L2-202ENST00000378072 1892 ntTSL 2 BASIC4.39□□□□□ -1.71
SSU72Q9NP77 FAM169A-201ENST00000389156 5990 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
SSU72Q9NP77 CEP97-201ENST00000341893 8361 ntAPPRIS P3 TSL 1 (best) BASIC4.38□□□□□ -1.71
SSU72Q9NP77 GTDC1-206ENST00000409214 2954 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
SSU72Q9NP77 ZNF480-202ENST00000335090 2722 ntTSL 3 BASIC4.38□□□□□ -1.71
SSU72Q9NP77 ADGRL3-202ENST00000504896 4816 ntTSL 5 BASIC4.38□□□□□ -1.71
SSU72Q9NP77 TECRL-201ENST00000381210 3573 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
SSU72Q9NP77 MIS12-201ENST00000381165 2505 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
SSU72Q9NP77 MS4A1-201ENST00000345732 3331 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
SSU72Q9NP77 GLCE-201ENST00000261858 5037 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
SSU72Q9NP77 HSPA4L-202ENST00000505726 2639 ntTSL 2 BASIC4.38□□□□□ -1.71
SSU72Q9NP77 OR5K1-202ENST00000642057 3466 ntAPPRIS P1 BASIC4.38□□□□□ -1.71
SSU72Q9NP77 CNGB3-201ENST00000320005 4347 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
SSU72Q9NP77 MAPK10-263ENST00000641052 4307 ntBASIC4.38□□□□□ -1.71
SSU72Q9NP77 DMXL2-202ENST00000449909 7465 ntAPPRIS ALT2 TSL 1 (best) BASIC4.38□□□□□ -1.71
SSU72Q9NP77 MIR10A-201ENST00000385043 110 ntBASIC4.38□□□□□ -1.71
SSU72Q9NP77 SNORA40C-201ENST00000391285 128 ntBASIC4.38□□□□□ -1.71
SSU72Q9NP77 RPS29P13-201ENST00000402041 169 ntBASIC4.38□□□□□ -1.71
SSU72Q9NP77 RNA5SP113-201ENST00000410486 84 ntBASIC4.38□□□□□ -1.71
SSU72Q9NP77 RNA5SP306-201ENST00000411087 107 ntBASIC4.38□□□□□ -1.71
SSU72Q9NP77 RN7SKP100-201ENST00000411258 284 ntBASIC4.38□□□□□ -1.71
SSU72Q9NP77 INTS6-AS1-201ENST00000434512 466 ntTSL 3 BASIC4.38□□□□□ -1.71
SSU72Q9NP77 AC005154.2-201ENST00000438110 379 ntBASIC4.38□□□□□ -1.71
SSU72Q9NP77 AC073850.1-201ENST00000449243 255 ntBASIC4.38□□□□□ -1.71
SSU72Q9NP77 AL591623.2-201ENST00000449978 222 ntBASIC4.38□□□□□ -1.71
SSU72Q9NP77 RN7SKP210-201ENST00000459176 261 ntBASIC4.38□□□□□ -1.71
SSU72Q9NP77 RNU4-71P-201ENST00000516258 113 ntBASIC4.38□□□□□ -1.71
SSU72Q9NP77 SCARNA15.2-201ENST00000516409 127 ntBASIC4.38□□□□□ -1.71
SSU72Q9NP77 IGHVII-53-1-201ENST00000519538 255 ntBASIC4.38□□□□□ -1.71
SSU72Q9NP77 AC025871.1-201ENST00000523935 443 ntTSL 2 BASIC4.38□□□□□ -1.71
SSU72Q9NP77 AC091564.3-201ENST00000527398 429 ntTSL 3 BASIC4.38□□□□□ -1.71
SSU72Q9NP77 AC008250.1-201ENST00000539874 522 ntTSL 3 BASIC4.38□□□□□ -1.71
SSU72Q9NP77 LINC01479-202ENST00000546170 444 ntTSL 2 BASIC4.38□□□□□ -1.71
SSU72Q9NP77 AC005476.1-201ENST00000554427 397 ntBASIC4.38□□□□□ -1.71
SSU72Q9NP77 AC215217.1-201ENST00000562162 347 ntTSL 3 BASIC4.38□□□□□ -1.71
SSU72Q9NP77 AC013565.1-201ENST00000565938 597 ntTSL 2 BASIC4.38□□□□□ -1.71
SSU72Q9NP77 AC104581.2-201ENST00000572227 430 ntBASIC4.38□□□□□ -1.71
SSU72Q9NP77 AC008121.1-201ENST00000603244 268 ntBASIC4.38□□□□□ -1.71
SSU72Q9NP77 CENPF-206ENST00000614578 528 ntTSL 5 BASIC4.38□□□□□ -1.71
SSU72Q9NP77 MIR376A1-201ENST00000616574 68 ntBASIC4.38□□□□□ -1.71
SSU72Q9NP77 AL807742.1-203ENST00000637444 759 ntTSL 5 BASIC4.38□□□□□ -1.71
SSU72Q9NP77 MYSM1-203ENST00000472487 7785 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
SSU72Q9NP77 MGAT4C-207ENST00000552808 1937 ntAPPRIS P1 TSL 2 BASIC4.38□□□□□ -1.71
SSU72Q9NP77 INTS6P1-201ENST00000504674 2530 ntBASIC4.38□□□□□ -1.71
SSU72Q9NP77 THEMIS-205ENST00000626040 3179 ntAPPRIS ALT2 TSL 2 BASIC4.38□□□□□ -1.71
SSU72Q9NP77 LINC02555-201ENST00000563933 1951 ntBASIC4.38□□□□□ -1.71
SSU72Q9NP77 PRKAA2-202ENST00000610361 9280 ntAPPRIS ALT1 TSL 5 BASIC4.38□□□□□ -1.71
SSU72Q9NP77 MME-201ENST00000360490 2360 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
SSU72Q9NP77 UBE4A-201ENST00000252108 6103 ntAPPRIS ALT1 TSL 1 (best) BASIC4.37□□□□□ -1.71
SSU72Q9NP77 AL365440.1-201ENST00000436135 2167 ntBASIC4.37□□□□□ -1.71
SSU72Q9NP77 SYNE2-204ENST00000358025 21842 ntAPPRIS P3 TSL 5 BASIC4.37□□□□□ -1.71
SSU72Q9NP77 PRKACB-201ENST00000370680 1914 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
SSU72Q9NP77 LRIF1-203ENST00000494675 1912 ntAPPRIS ALT2 TSL 2 BASIC4.37□□□□□ -1.71
SSU72Q9NP77 DEFB108B-201ENST00000328698 222 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
SSU72Q9NP77 DEFB108F-201ENST00000344638 222 ntBASIC4.37□□□□□ -1.71
SSU72Q9NP77 RNA5SP305-201ENST00000362665 119 ntBASIC4.37□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 92.8 ms