Protein–RNA interactions for Protein: Q9HCK8

CHD8, Chromodomain-helicase-DNA-binding protein 8, humanhuman

Predictions only

Length 2,581 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8Q9HCK8 MTCYBP24-201ENST00000420387 1106 ntBASIC0.59□□□□□ -2.31
CHD8Q9HCK8 AC023347.2-201ENST00000433994 462 ntBASIC0.59□□□□□ -2.31
CHD8Q9HCK8 MRPS17P9-201ENST00000511924 393 ntBASIC0.59□□□□□ -2.31
CHD8Q9HCK8 RNU6-567P-201ENST00000516746 107 ntBASIC0.59□□□□□ -2.31
CHD8Q9HCK8 AC025857.1-201ENST00000525252 377 ntBASIC0.59□□□□□ -2.31
CHD8Q9HCK8 AC090912.2-203ENST00000581177 477 ntTSL 3 BASIC0.59□□□□□ -2.31
CHD8Q9HCK8 NUTF2P8-201ENST00000604593 363 ntBASIC0.59□□□□□ -2.31
CHD8Q9HCK8 AC009090.3-201ENST00000616553 565 ntBASIC0.59□□□□□ -2.31
CHD8Q9HCK8 AC013470.4-201ENST00000619978 986 ntBASIC0.59□□□□□ -2.31
CHD8Q9HCK8 AC079597.1-201ENST00000624306 508 ntBASIC0.59□□□□□ -2.31
CHD8Q9HCK8 SATB1-AS1-258ENST00000629405 664 ntTSL 5 BASIC0.59□□□□□ -2.31
CHD8Q9HCK8 SPAM1-206ENST00000460182 2154 ntAPPRIS ALT2 TSL 1 (best) BASIC0.59□□□□□ -2.31
CHD8Q9HCK8 SCOC-202ENST00000394201 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC0.59□□□□□ -2.31
CHD8Q9HCK8 TRAJ11-201ENST00000390526 60 ntAPPRIS P1 BASIC0.59□□□□□ -2.32
CHD8Q9HCK8 AL512604.1-201ENST00000404812 257 ntBASIC0.59□□□□□ -2.32
CHD8Q9HCK8 LURAP1L-AS1-201ENST00000417638 799 ntTSL 3 BASIC0.59□□□□□ -2.32
CHD8Q9HCK8 ENOX1-AS2-201ENST00000434273 609 ntTSL 3 BASIC0.59□□□□□ -2.32
CHD8Q9HCK8 RABEPKP1-201ENST00000440529 1026 ntBASIC0.59□□□□□ -2.32
CHD8Q9HCK8 RPL23AP33-201ENST00000442301 452 ntBASIC0.59□□□□□ -2.32
CHD8Q9HCK8 AL022238.1-201ENST00000442557 355 ntBASIC0.59□□□□□ -2.32
CHD8Q9HCK8 SNORD57-201ENST00000448188 72 ntBASIC0.59□□□□□ -2.32
CHD8Q9HCK8 KLF3P2-201ENST00000465138 268 ntBASIC0.59□□□□□ -2.32
CHD8Q9HCK8 AC008869.1-201ENST00000510938 442 ntTSL 2 BASIC0.59□□□□□ -2.32
CHD8Q9HCK8 CENPUP2-201ENST00000555897 1186 ntBASIC0.59□□□□□ -2.32
CHD8Q9HCK8 MIR548Y-201ENST00000582739 110 ntBASIC0.59□□□□□ -2.32
CHD8Q9HCK8 AC006249.1-201ENST00000621223 471 ntBASIC0.59□□□□□ -2.32
CHD8Q9HCK8 ZNF382-210ENST00000639288 834 ntTSL 5 BASIC0.59□□□□□ -2.32
CHD8Q9HCK8 LRIF1-203ENST00000494675 1912 ntAPPRIS ALT2 TSL 2 BASIC0.59□□□□□ -2.32
CHD8Q9HCK8 RNU1-105P-201ENST00000363470 161 ntBASIC0.58□□□□□ -2.32
CHD8Q9HCK8 TPMTP4-201ENST00000450749 678 ntBASIC0.58□□□□□ -2.32
CHD8Q9HCK8 RNU2-19P-201ENST00000517288 84 ntBASIC0.58□□□□□ -2.32
CHD8Q9HCK8 AL157402.2-201ENST00000566394 416 ntTSL 3 BASIC0.58□□□□□ -2.32
CHD8Q9HCK8 AC012254.4-201ENST00000588843 273 ntBASIC0.58□□□□□ -2.32
CHD8Q9HCK8 AC113194.1-201ENST00000606037 500 ntBASIC0.58□□□□□ -2.32
CHD8Q9HCK8 MIR6130-201ENST00000619419 109 ntBASIC0.58□□□□□ -2.32
CHD8Q9HCK8 MIR198-201ENST00000637333 62 ntBASIC0.58□□□□□ -2.32
CHD8Q9HCK8 RNA5SP391-201ENST00000363456 119 ntBASIC0.58□□□□□ -2.32
CHD8Q9HCK8 SNORA51.6-201ENST00000384151 125 ntBASIC0.58□□□□□ -2.32
CHD8Q9HCK8 SFR1P1-201ENST00000403720 688 ntBASIC0.58□□□□□ -2.32
CHD8Q9HCK8 RNU2-41P-201ENST00000410991 178 ntBASIC0.58□□□□□ -2.32
CHD8Q9HCK8 AL596247.1-201ENST00000416076 442 ntTSL 3 BASIC0.58□□□□□ -2.32
CHD8Q9HCK8 AC079780.1-201ENST00000428259 207 ntBASIC0.58□□□□□ -2.32
CHD8Q9HCK8 TOMM22P2-201ENST00000430735 237 ntBASIC0.58□□□□□ -2.32
CHD8Q9HCK8 AC087879.1-201ENST00000474343 374 ntBASIC0.58□□□□□ -2.32
CHD8Q9HCK8 HTN3-202ENST00000526767 578 ntAPPRIS P2 TSL 1 (best) BASIC0.58□□□□□ -2.32
CHD8Q9HCK8 AP001180.6-201ENST00000584918 159 ntBASIC0.58□□□□□ -2.32
CHD8Q9HCK8 VN1R81P-201ENST00000602085 372 ntBASIC0.58□□□□□ -2.32
CHD8Q9HCK8 AC109809.1-201ENST00000619665 545 ntBASIC0.58□□□□□ -2.32
CHD8Q9HCK8 IGSF11-AS1-201ENST00000477009 1604 ntTSL 2 BASIC0.58□□□□□ -2.32
CHD8Q9HCK8 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC0.58□□□□□ -2.32
CHD8Q9HCK8 AC008555.8-201ENST00000623602 2168 ntBASIC0.57□□□□□ -2.32
CHD8Q9HCK8 TRDJ3-201ENST00000390476 59 ntAPPRIS P1 BASIC0.57□□□□□ -2.32
CHD8Q9HCK8 AL513475.1-201ENST00000406602 315 ntBASIC0.57□□□□□ -2.32
CHD8Q9HCK8 MYO16-AS2-201ENST00000412809 436 ntTSL 3 BASIC0.57□□□□□ -2.32
CHD8Q9HCK8 AC099677.1-201ENST00000420575 175 ntBASIC0.57□□□□□ -2.32
CHD8Q9HCK8 TRIM60P3Y-201ENST00000432201 673 ntBASIC0.57□□□□□ -2.32
CHD8Q9HCK8 AC013269.3-201ENST00000450486 444 ntTSL 3 BASIC0.57□□□□□ -2.32
CHD8Q9HCK8 RPS24P6-201ENST00000452670 400 ntBASIC0.57□□□□□ -2.32
CHD8Q9HCK8 PDC-202ENST00000497198 1174 ntTSL 1 (best) BASIC0.57□□□□□ -2.32
CHD8Q9HCK8 LINC02103-201ENST00000512849 523 ntTSL 5 BASIC0.57□□□□□ -2.32
CHD8Q9HCK8 SUB1P1-201ENST00000524415 382 ntBASIC0.57□□□□□ -2.32
CHD8Q9HCK8 AC022880.1-201ENST00000534017 973 ntBASIC0.57□□□□□ -2.32
CHD8Q9HCK8 AL355810.1-201ENST00000614629 552 ntBASIC0.57□□□□□ -2.32
CHD8Q9HCK8 UCA1.1-201ENST00000620952 75 ntBASIC0.57□□□□□ -2.32
CHD8Q9HCK8 AC091932.3-201ENST00000624223 323 ntBASIC0.57□□□□□ -2.32
CHD8Q9HCK8 MIR126-201ENST00000362291 85 ntBASIC0.57□□□□□ -2.32
CHD8Q9HCK8 SNORA81-201ENST00000408493 178 ntBASIC0.57□□□□□ -2.32
CHD8Q9HCK8 AP000550.2-201ENST00000417463 774 ntTSL 5 BASIC0.57□□□□□ -2.32
CHD8Q9HCK8 RPL21P32-201ENST00000419877 477 ntBASIC0.57□□□□□ -2.32
CHD8Q9HCK8 TRAPPC2P4-201ENST00000421750 331 ntBASIC0.57□□□□□ -2.32
CHD8Q9HCK8 LINC02195-201ENST00000443373 294 ntTSL 3 BASIC0.57□□□□□ -2.32
CHD8Q9HCK8 RNU6-889P-201ENST00000517189 103 ntBASIC0.57□□□□□ -2.32
CHD8Q9HCK8 AC090739.1-201ENST00000522190 708 ntTSL 3 BASIC0.57□□□□□ -2.32
CHD8Q9HCK8 OR5AL2P-201ENST00000532185 920 ntBASIC0.57□□□□□ -2.32
CHD8Q9HCK8 AC107214.2-201ENST00000608204 634 ntBASIC0.57□□□□□ -2.32
CHD8Q9HCK8 CC2D2B-209ENST00000618242 980 ntTSL 5 BASIC0.57□□□□□ -2.32
CHD8Q9HCK8 MUC15-203ENST00000455601 3156 ntAPPRIS P1 TSL 2 BASIC0.57□□□□□ -2.32
CHD8Q9HCK8 Y_RNA.514-201ENST00000384528 112 ntBASIC0.56□□□□□ -2.32
CHD8Q9HCK8 RPL7P30-201ENST00000420888 709 ntBASIC0.56□□□□□ -2.32
CHD8Q9HCK8 AC016717.1-201ENST00000448918 286 ntBASIC0.56□□□□□ -2.32
CHD8Q9HCK8 LINC01036-201ENST00000458683 858 ntTSL 3 BASIC0.56□□□□□ -2.32
CHD8Q9HCK8 LINC02046-202ENST00000481334 390 ntTSL 3 BASIC0.56□□□□□ -2.32
CHD8Q9HCK8 HMGB3P17-201ENST00000504195 649 ntBASIC0.56□□□□□ -2.32
CHD8Q9HCK8 AC027343.1-201ENST00000504765 407 ntTSL 4 BASIC0.56□□□□□ -2.32
CHD8Q9HCK8 PCNAP1-201ENST00000505363 709 ntBASIC0.56□□□□□ -2.32
CHD8Q9HCK8 TMEM132D-AS1-202ENST00000510001 293 ntTSL 1 (best) BASIC0.56□□□□□ -2.32
CHD8Q9HCK8 AC114284.1-201ENST00000511422 1114 ntTSL 2 BASIC0.56□□□□□ -2.32
CHD8Q9HCK8 MRPS36P2-201ENST00000512569 299 ntBASIC0.56□□□□□ -2.32
CHD8Q9HCK8 RNU5F-8P-201ENST00000515941 111 ntBASIC0.56□□□□□ -2.32
CHD8Q9HCK8 AC131274.4-201ENST00000577879 398 ntTSL 3 BASIC0.56□□□□□ -2.32
CHD8Q9HCK8 AC090371.2-202ENST00000582239 644 ntTSL 5 BASIC0.56□□□□□ -2.32
CHD8Q9HCK8 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC0.56□□□□□ -2.32
CHD8Q9HCK8 TRAV40-201ENST00000390467 317 ntAPPRIS P1 BASIC0.56□□□□□ -2.32
CHD8Q9HCK8 SEPT2P1-201ENST00000419651 180 ntBASIC0.56□□□□□ -2.32
CHD8Q9HCK8 AC069277.1-205ENST00000432743 630 ntTSL 5 BASIC0.56□□□□□ -2.32
CHD8Q9HCK8 SNRPG-205ENST00000449935 428 ntTSL 1 (best) BASIC0.56□□□□□ -2.32
CHD8Q9HCK8 HSPE1P24-201ENST00000450782 238 ntBASIC0.56□□□□□ -2.32
CHD8Q9HCK8 MTATP6P7-201ENST00000453315 681 ntBASIC0.56□□□□□ -2.32
CHD8Q9HCK8 AC004884.2-201ENST00000476569 546 ntTSL 4 BASIC0.56□□□□□ -2.32
CHD8Q9HCK8 SNORA31.13-201ENST00000516624 135 ntBASIC0.56□□□□□ -2.32
Retrieved 100 of 98,524 protein–RNA pairs in 106.8 ms