Protein–RNA interactions for Protein: Q99618

CDCA3, Cell division cycle-associated protein 3, humanhuman

Predicted RBP Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3Q99618 MIER3-203ENST00000381213 5198 ntAPPRIS P3 TSL 1 (best) BASIC2.84□□□□□ -1.96
CDCA3Q99618 AC092435.3-201ENST00000565538 3654 ntBASIC2.83□□□□□ -1.96
CDCA3Q99618 RNU6-960P-201ENST00000364056 120 ntBASIC2.83□□□□□ -1.96
CDCA3Q99618 OR5H15-201ENST00000383696 930 ntBASIC2.83□□□□□ -1.96
CDCA3Q99618 Y_RNA.559-201ENST00000384686 107 ntBASIC2.83□□□□□ -1.96
CDCA3Q99618 RNU6-1077P-201ENST00000410506 102 ntBASIC2.83□□□□□ -1.96
CDCA3Q99618 AL663109.1-201ENST00000411498 844 ntBASIC2.83□□□□□ -1.96
CDCA3Q99618 AC008440.2-201ENST00000413496 423 ntTSL 5 BASIC2.83□□□□□ -1.96
CDCA3Q99618 AL078645.1-201ENST00000414377 423 ntTSL 3 BASIC2.83□□□□□ -1.96
CDCA3Q99618 MTND3P17-201ENST00000416968 344 ntBASIC2.83□□□□□ -1.96
CDCA3Q99618 ZNF90P2-204ENST00000419323 1075 ntBASIC2.83□□□□□ -1.96
CDCA3Q99618 AL162254.1-202ENST00000419604 497 ntTSL 5 BASIC2.83□□□□□ -1.96
CDCA3Q99618 PIGFP2-201ENST00000421400 651 ntBASIC2.83□□□□□ -1.96
CDCA3Q99618 HSPE1P1-201ENST00000421494 318 ntBASIC2.83□□□□□ -1.96
CDCA3Q99618 LINC01402-201ENST00000422226 279 ntTSL 3 BASIC2.83□□□□□ -1.96
CDCA3Q99618 TOMM20P4-201ENST00000427861 435 ntBASIC2.83□□□□□ -1.96
CDCA3Q99618 AL138775.1-201ENST00000429539 575 ntTSL 1 (best) BASIC2.83□□□□□ -1.96
CDCA3Q99618 HMGB1P27-201ENST00000431429 603 ntBASIC2.83□□□□□ -1.96
CDCA3Q99618 AC244505.4-201ENST00000434905 287 ntBASIC2.83□□□□□ -1.96
CDCA3Q99618 AC112518.1-201ENST00000436089 575 ntTSL 4 BASIC2.83□□□□□ -1.96
CDCA3Q99618 HMGB3P12-201ENST00000438745 556 ntBASIC2.83□□□□□ -1.96
CDCA3Q99618 SSXP5-201ENST00000443473 287 ntBASIC2.83□□□□□ -1.96
CDCA3Q99618 UQCRHP3-201ENST00000451503 251 ntBASIC2.83□□□□□ -1.96
CDCA3Q99618 AC013267.1-201ENST00000458227 267 ntBASIC2.83□□□□□ -1.96
CDCA3Q99618 RNU6-420P-201ENST00000458780 107 ntBASIC2.83□□□□□ -1.96
CDCA3Q99618 AL160314.1-201ENST00000490836 438 ntBASIC2.83□□□□□ -1.96
CDCA3Q99618 AC105252.1-201ENST00000503089 286 ntBASIC2.83□□□□□ -1.96
CDCA3Q99618 AC023794.1-201ENST00000504210 403 ntTSL 2 BASIC2.83□□□□□ -1.96
CDCA3Q99618 ANXA2P1-201ENST00000505539 926 ntBASIC2.83□□□□□ -1.96
CDCA3Q99618 AC004052.1-202ENST00000505680 516 ntTSL 3 BASIC2.83□□□□□ -1.96
CDCA3Q99618 RNU6-430P-201ENST00000517078 107 ntBASIC2.83□□□□□ -1.96
CDCA3Q99618 AC087439.1-201ENST00000517920 398 ntTSL 3 BASIC2.83□□□□□ -1.96
CDCA3Q99618 AC245166.1-201ENST00000521012 253 ntBASIC2.83□□□□□ -1.96
CDCA3Q99618 AC091534.1-202ENST00000549953 468 ntTSL 5 BASIC2.83□□□□□ -1.96
CDCA3Q99618 RPS3AP4-201ENST00000555161 764 ntBASIC2.83□□□□□ -1.96
CDCA3Q99618 MIR3609-201ENST00000582661 80 ntBASIC2.83□□□□□ -1.96
CDCA3Q99618 AC007363.1-201ENST00000604736 620 ntBASIC2.83□□□□□ -1.96
CDCA3Q99618 AL139286.2-201ENST00000606838 396 ntBASIC2.83□□□□□ -1.96
CDCA3Q99618 AL627309.6-201ENST00000606857 840 ntBASIC2.83□□□□□ -1.96
CDCA3Q99618 AC064807.4-201ENST00000607201 407 ntBASIC2.83□□□□□ -1.96
CDCA3Q99618 AC034102.8-201ENST00000615146 484 ntBASIC2.83□□□□□ -1.96
CDCA3Q99618 AC068880.5-201ENST00000624331 290 ntBASIC2.83□□□□□ -1.96
CDCA3Q99618 NOX4-202ENST00000343727 3347 ntTSL 2 BASIC2.83□□□□□ -1.96
CDCA3Q99618 RGS13-204ENST00000543215 1518 ntAPPRIS P1 TSL 1 (best) BASIC2.83□□□□□ -1.96
CDCA3Q99618 PICALM-209ENST00000528398 2049 ntTSL 2 BASIC2.82□□□□□ -1.96
CDCA3Q99618 FAM184A-202ENST00000352896 3700 ntAPPRIS ALT1 TSL 1 (best) BASIC2.82□□□□□ -1.96
CDCA3Q99618 AC073343.1-201ENST00000328239 651 ntBASIC2.82□□□□□ -1.96
CDCA3Q99618 RBBP8-202ENST00000360790 2962 ntTSL 1 (best) BASIC2.82□□□□□ -1.96
CDCA3Q99618 RNU6-288P-201ENST00000363690 104 ntBASIC2.82□□□□□ -1.96
CDCA3Q99618 RNU4-75P-201ENST00000364621 146 ntBASIC2.82□□□□□ -1.96
CDCA3Q99618 EEF1E1-201ENST00000379715 1077 ntAPPRIS P1 TSL 1 (best) BASIC2.82□□□□□ -1.96
CDCA3Q99618 AL356057.3-201ENST00000402607 340 ntBASIC2.82□□□□□ -1.96
CDCA3Q99618 SNORA3.2-201ENST00000408221 125 ntBASIC2.82□□□□□ -1.96
CDCA3Q99618 RNU6ATAC40P-201ENST00000408580 137 ntBASIC2.82□□□□□ -1.96
CDCA3Q99618 RNU2-33P-201ENST00000410344 192 ntBASIC2.82□□□□□ -1.96
CDCA3Q99618 AL365356.1-201ENST00000411512 736 ntTSL 3 BASIC2.82□□□□□ -1.96
CDCA3Q99618 LINC01737-201ENST00000412647 403 ntTSL 1 (best) BASIC2.82□□□□□ -1.96
CDCA3Q99618 AC114491.1-201ENST00000416095 246 ntBASIC2.82□□□□□ -1.96
CDCA3Q99618 AC073311.1-201ENST00000420146 505 ntTSL 5 BASIC2.82□□□□□ -1.96
CDCA3Q99618 RBM6-203ENST00000421682 684 ntTSL 2 BASIC2.82□□□□□ -1.96
CDCA3Q99618 AC005062.1-206ENST00000424516 710 ntTSL 3 BASIC2.82□□□□□ -1.96
CDCA3Q99618 AC092047.1-201ENST00000424997 240 ntBASIC2.82□□□□□ -1.96
CDCA3Q99618 AL358934.1-201ENST00000432346 324 ntBASIC2.82□□□□□ -1.96
CDCA3Q99618 Z82210.1-201ENST00000440037 231 ntBASIC2.82□□□□□ -1.96
CDCA3Q99618 MTND4P25-201ENST00000441039 533 ntBASIC2.82□□□□□ -1.96
CDCA3Q99618 BNIP3P2-201ENST00000441221 577 ntBASIC2.82□□□□□ -1.96
CDCA3Q99618 AC087588.1-201ENST00000462203 316 ntBASIC2.82□□□□□ -1.96
CDCA3Q99618 AL627309.4-201ENST00000496488 457 ntTSL 5 BASIC2.82□□□□□ -1.96
CDCA3Q99618 RPS3A-208ENST00000509736 576 ntTSL 2 BASIC2.82□□□□□ -1.96
CDCA3Q99618 AC124854.1-202ENST00000513779 339 ntTSL 3 BASIC2.82□□□□□ -1.96
CDCA3Q99618 AC004053.1-201ENST00000515127 575 ntTSL 5 BASIC2.82□□□□□ -1.96
CDCA3Q99618 AC110296.1-201ENST00000515680 341 ntTSL 3 BASIC2.82□□□□□ -1.96
CDCA3Q99618 SNORA31.3-201ENST00000516029 96 ntBASIC2.82□□□□□ -1.96
CDCA3Q99618 SCARNA24.1-201ENST00000516465 137 ntBASIC2.82□□□□□ -1.96
CDCA3Q99618 RNA5SP471-201ENST00000516971 106 ntBASIC2.82□□□□□ -1.96
CDCA3Q99618 ATP5F1P5-201ENST00000526403 760 ntBASIC2.82□□□□□ -1.96
CDCA3Q99618 AP003392.2-201ENST00000527269 208 ntBASIC2.82□□□□□ -1.96
CDCA3Q99618 AP003498.1-201ENST00000532530 347 ntTSL 3 BASIC2.82□□□□□ -1.96
CDCA3Q99618 LINC01482-203ENST00000589610 468 ntTSL 3 BASIC2.82□□□□□ -1.96
CDCA3Q99618 AC087683.1-201ENST00000591187 441 ntBASIC2.82□□□□□ -1.96
CDCA3Q99618 AC073648.5-201ENST00000603502 305 ntBASIC2.82□□□□□ -1.96
CDCA3Q99618 BNIP3P10-201ENST00000605360 577 ntBASIC2.82□□□□□ -1.96
CDCA3Q99618 Z99129.1-201ENST00000612510 255 ntBASIC2.82□□□□□ -1.96
CDCA3Q99618 ZMYM2-203ENST00000382874 10139 ntAPPRIS P1 TSL 1 (best) BASIC2.82□□□□□ -1.96
CDCA3Q99618 LTN1-201ENST00000361371 7685 ntAPPRIS P1 TSL 1 (best) BASIC2.82□□□□□ -1.96
CDCA3Q99618 THEMIS-201ENST00000368248 3866 ntAPPRIS P3 TSL 1 (best) BASIC2.82□□□□□ -1.96
CDCA3Q99618 UBE2L2-201ENST00000254302 429 ntBASIC2.81□□□□□ -1.96
CDCA3Q99618 RNU6-1167P-201ENST00000363227 94 ntBASIC2.81□□□□□ -1.96
CDCA3Q99618 RNU6-512P-201ENST00000364438 103 ntBASIC2.81□□□□□ -1.96
CDCA3Q99618 SNORA51.4-201ENST00000364993 124 ntBASIC2.81□□□□□ -1.96
CDCA3Q99618 RNU6-282P-201ENST00000365357 103 ntBASIC2.81□□□□□ -1.96
CDCA3Q99618 RNU6-946P-201ENST00000383878 107 ntBASIC2.81□□□□□ -1.96
CDCA3Q99618 TRAV26-1-201ENST00000390455 537 ntAPPRIS P1 BASIC2.81□□□□□ -1.96
CDCA3Q99618 ELF3-AS1-201ENST00000415582 500 ntTSL 2 BASIC2.81□□□□□ -1.96
CDCA3Q99618 AL135786.1-201ENST00000415892 214 ntBASIC2.81□□□□□ -1.96
CDCA3Q99618 AC009158.1-206ENST00000417476 454 ntTSL 3 BASIC2.81□□□□□ -1.96
CDCA3Q99618 MORF4L1P6-201ENST00000418771 268 ntBASIC2.81□□□□□ -1.96
CDCA3Q99618 AC104651.1-201ENST00000427559 735 ntBASIC2.81□□□□□ -1.96
CDCA3Q99618 AC114808.2-201ENST00000428335 536 ntTSL 4 BASIC2.81□□□□□ -1.96
CDCA3Q99618 LINC01724-201ENST00000430519 621 ntTSL 3 BASIC2.81□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 85.6 ms