Protein–RNA interactions for Protein: Q96JQ5

MS4A4A, Membrane-spanning 4-domains subfamily A member 4A, humanhuman

Predictions only

Length 239 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MS4A4AQ96JQ5 AC125238.1-201ENST00000448842 249 ntBASIC5.93□□□□□ -1.46
MS4A4AQ96JQ5 AC012308.1-201ENST00000451232 178 ntBASIC5.93□□□□□ -1.46
MS4A4AQ96JQ5 AC108145.1-201ENST00000503770 153 ntBASIC5.93□□□□□ -1.46
MS4A4AQ96JQ5 AC093534.2-201ENST00000511418 420 ntTSL 3 BASIC5.93□□□□□ -1.46
MS4A4AQ96JQ5 RNU6-1061P-201ENST00000516530 99 ntBASIC5.93□□□□□ -1.46
MS4A4AQ96JQ5 UBE2Q2P6-201ENST00000612666 153 ntBASIC5.93□□□□□ -1.46
MS4A4AQ96JQ5 AL121890.5-201ENST00000620848 304 ntBASIC5.93□□□□□ -1.46
MS4A4AQ96JQ5 VPS35-201ENST00000299138 6790 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
MS4A4AQ96JQ5 NFAT5-202ENST00000354436 13229 ntAPPRIS P4 TSL 1 (best) BASIC5.93□□□□□ -1.46
MS4A4AQ96JQ5 DNAJC16-202ENST00000375847 6069 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
MS4A4AQ96JQ5 CCDC62-205ENST00000537566 3537 ntAPPRIS ALT2 TSL 2 BASIC5.93□□□□□ -1.46
MS4A4AQ96JQ5 CNTN1-208ENST00000551295 5557 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
MS4A4AQ96JQ5 NEMF-201ENST00000298310 6234 ntAPPRIS P1 TSL 5 BASIC5.93□□□□□ -1.46
MS4A4AQ96JQ5 MDGA2-201ENST00000357362 2965 ntTSL 5 BASIC5.93□□□□□ -1.46
MS4A4AQ96JQ5 MATR3-230ENST00000394800 5513 ntTSL 5 BASIC5.93□□□□□ -1.46
MS4A4AQ96JQ5 RALGAPA2-201ENST00000202677 6152 ntAPPRIS P1 TSL 5 BASIC5.93□□□□□ -1.46
MS4A4AQ96JQ5 AL137141.1-201ENST00000624622 4836 ntBASIC5.92□□□□□ -1.46
MS4A4AQ96JQ5 HDX-202ENST00000373177 2924 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
MS4A4AQ96JQ5 FRK-201ENST00000606080 13230 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
MS4A4AQ96JQ5 PLCB4-201ENST00000278655 5430 ntAPPRIS ALT1 TSL 1 (best) BASIC5.92□□□□□ -1.46
MS4A4AQ96JQ5 Y_RNA.35-201ENST00000362601 101 ntBASIC5.92□□□□□ -1.46
MS4A4AQ96JQ5 Y_RNA.341-201ENST00000365341 102 ntBASIC5.92□□□□□ -1.46
MS4A4AQ96JQ5 AL357515.1-201ENST00000402967 542 ntBASIC5.92□□□□□ -1.46
MS4A4AQ96JQ5 RNU6-855P-201ENST00000410395 104 ntBASIC5.92□□□□□ -1.46
MS4A4AQ96JQ5 AL021408.1-201ENST00000430428 552 ntTSL 4 BASIC5.92□□□□□ -1.46
MS4A4AQ96JQ5 BX323845.1-201ENST00000432417 179 ntBASIC5.92□□□□□ -1.46
MS4A4AQ96JQ5 AL353748.1-201ENST00000440753 474 ntBASIC5.92□□□□□ -1.46
MS4A4AQ96JQ5 ATP6V0E1P2-201ENST00000441771 245 ntBASIC5.92□□□□□ -1.46
MS4A4AQ96JQ5 RPL37P4-201ENST00000448908 268 ntBASIC5.92□□□□□ -1.46
MS4A4AQ96JQ5 AC146944.2-203ENST00000502493 354 ntBASIC5.92□□□□□ -1.46
MS4A4AQ96JQ5 AC008948.1-201ENST00000506058 325 ntTSL 2 BASIC5.92□□□□□ -1.46
MS4A4AQ96JQ5 AC139495.1-202ENST00000513164 354 ntBASIC5.92□□□□□ -1.46
MS4A4AQ96JQ5 SNORA31.20-201ENST00000517111 133 ntBASIC5.92□□□□□ -1.46
MS4A4AQ96JQ5 RNU2-60P-201ENST00000517290 128 ntBASIC5.92□□□□□ -1.46
MS4A4AQ96JQ5 AP004371.1-201ENST00000525240 214 ntBASIC5.92□□□□□ -1.46
MS4A4AQ96JQ5 AC138625.2-201ENST00000563968 551 ntTSL 3 BASIC5.92□□□□□ -1.46
MS4A4AQ96JQ5 RN7SL690P-201ENST00000582087 240 ntBASIC5.92□□□□□ -1.46
MS4A4AQ96JQ5 AC025946.2-201ENST00000603398 234 ntBASIC5.92□□□□□ -1.46
MS4A4AQ96JQ5 uc_338.7-201ENST00000621834 124 ntBASIC5.92□□□□□ -1.46
MS4A4AQ96JQ5 LMBR1-222ENST00000638959 93 ntTSL 5 BASIC5.92□□□□□ -1.46
MS4A4AQ96JQ5 MCM10-201ENST00000378694 4587 ntTSL 5 BASIC5.92□□□□□ -1.46
MS4A4AQ96JQ5 ZNF415-201ENST00000243643 2270 ntAPPRIS P3 TSL 1 (best) BASIC5.92□□□□□ -1.46
MS4A4AQ96JQ5 KANSL1L-209ENST00000457374 2264 ntTSL 2 BASIC5.92□□□□□ -1.46
MS4A4AQ96JQ5 UPF2-201ENST00000356352 5569 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
MS4A4AQ96JQ5 CCNH-206ENST00000508855 2391 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
MS4A4AQ96JQ5 MLH3-202ENST00000380968 7819 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
MS4A4AQ96JQ5 MDM4-203ENST00000367182 10073 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
MS4A4AQ96JQ5 MFN1-201ENST00000263969 2754 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
MS4A4AQ96JQ5 LRRN3-201ENST00000308478 3099 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
MS4A4AQ96JQ5 MUC5AC-201ENST00000621226 17448 ntAPPRIS P1 TSL 5 BASIC5.91□□□□□ -1.46
MS4A4AQ96JQ5 DAAM1-202ENST00000395125 5806 ntAPPRIS P3 TSL 1 (best) BASIC5.91□□□□□ -1.46
MS4A4AQ96JQ5 OR13G1-202ENST00000642119 2568 ntAPPRIS P1 BASIC5.91□□□□□ -1.46
MS4A4AQ96JQ5 DGKB-202ENST00000402815 5595 ntAPPRIS ALT1 TSL 5 BASIC5.91□□□□□ -1.46
MS4A4AQ96JQ5 GABRA3-201ENST00000370314 3712 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
MS4A4AQ96JQ5 CREB5-201ENST00000357727 8532 ntAPPRIS P4 TSL 1 (best) BASIC5.91□□□□□ -1.46
MS4A4AQ96JQ5 IREB2-201ENST00000258886 6354 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
MS4A4AQ96JQ5 SNORD115-30-201ENST00000364117 82 ntBASIC5.91□□□□□ -1.46
MS4A4AQ96JQ5 LINC01545-201ENST00000377879 521 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
MS4A4AQ96JQ5 MS4A4E-202ENST00000398986 522 ntAPPRIS P1 TSL 5 BASIC5.91□□□□□ -1.46
MS4A4AQ96JQ5 AL590399.1-203ENST00000412631 256 ntTSL 5 BASIC5.91□□□□□ -1.46
MS4A4AQ96JQ5 RNU1-103P-201ENST00000516502 125 ntBASIC5.91□□□□□ -1.46
MS4A4AQ96JQ5 EHBP1-202ENST00000405015 4108 ntAPPRIS ALT2 TSL 2 BASIC5.91□□□□□ -1.46
MS4A4AQ96JQ5 IKZF2-210ENST00000451136 9344 ntTSL 5 BASIC5.91□□□□□ -1.46
MS4A4AQ96JQ5 DAZ2-204ENST00000382431 3637 ntAPPRIS ALT2 TSL 1 (best) BASIC5.91□□□□□ -1.46
MS4A4AQ96JQ5 SPHKAP-201ENST00000344657 6804 ntAPPRIS P3 TSL 1 (best) BASIC5.91□□□□□ -1.46
MS4A4AQ96JQ5 CFAP70-203ENST00000355577 3691 ntTSL 5 BASIC5.91□□□□□ -1.46
MS4A4AQ96JQ5 IL23R-205ENST00000637002 2208 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
MS4A4AQ96JQ5 DNHD1-212ENST00000527990 14298 ntAPPRIS P1 TSL 5 BASIC5.91□□□□□ -1.46
MS4A4AQ96JQ5 ZNF181-203ENST00000459757 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC5.91□□□□□ -1.46
MS4A4AQ96JQ5 FAM197Y9-201ENST00000451062 2332 ntTSL 5 BASIC5.91□□□□□ -1.46
MS4A4AQ96JQ5 ACSL5-202ENST00000354655 3351 ntAPPRIS P1 TSL 2 BASIC5.9□□□□□ -1.46
MS4A4AQ96JQ5 LYRM2-208ENST00000523377 5353 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
MS4A4AQ96JQ5 ZBTB38-222ENST00000637056 6056 ntAPPRIS P1 TSL 5 BASIC5.9□□□□□ -1.46
MS4A4AQ96JQ5 LMO3-225ENST00000541295 3498 ntTSL 2 BASIC5.9□□□□□ -1.46
MS4A4AQ96JQ5 BDNF-211ENST00000439476 4532 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
MS4A4AQ96JQ5 LRRC49-224ENST00000560691 2531 ntTSL 2 BASIC5.9□□□□□ -1.46
MS4A4AQ96JQ5 RIC3-202ENST00000335425 5223 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
MS4A4AQ96JQ5 PCDH18-201ENST00000344876 5906 ntAPPRIS P3 TSL 1 (best) BASIC5.9□□□□□ -1.46
MS4A4AQ96JQ5 MID2-202ENST00000443968 2251 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
MS4A4AQ96JQ5 PSD3-204ENST00000440756 11690 ntAPPRIS ALT2 TSL 5 BASIC5.9□□□□□ -1.46
MS4A4AQ96JQ5 RNU6-799P-201ENST00000363567 107 ntBASIC5.9□□□□□ -1.46
MS4A4AQ96JQ5 RNU6-454P-201ENST00000364292 107 ntBASIC5.9□□□□□ -1.46
MS4A4AQ96JQ5 SNORD73B-201ENST00000364394 72 ntBASIC5.9□□□□□ -1.46
MS4A4AQ96JQ5 RNU1-100P-201ENST00000365255 165 ntBASIC5.9□□□□□ -1.46
MS4A4AQ96JQ5 RNU6-140P-201ENST00000384566 108 ntBASIC5.9□□□□□ -1.46
MS4A4AQ96JQ5 AC006037.1-201ENST00000437967 287 ntTSL 5 BASIC5.9□□□□□ -1.46
MS4A4AQ96JQ5 AL354714.3-201ENST00000447284 493 ntBASIC5.9□□□□□ -1.46
MS4A4AQ96JQ5 SPRY4-AS1-205ENST00000514303 152 ntTSL 3 BASIC5.9□□□□□ -1.46
MS4A4AQ96JQ5 RNU6-561P-201ENST00000516222 102 ntBASIC5.9□□□□□ -1.46
MS4A4AQ96JQ5 MFAP5-205ENST00000535336 566 ntTSL 4 BASIC5.9□□□□□ -1.46
MS4A4AQ96JQ5 MRPS21P9-201ENST00000571150 257 ntBASIC5.9□□□□□ -1.46
MS4A4AQ96JQ5 AC004832.5-201ENST00000608677 401 ntBASIC5.9□□□□□ -1.46
MS4A4AQ96JQ5 MIR6134-201ENST00000617606 109 ntBASIC5.9□□□□□ -1.46
MS4A4AQ96JQ5 MELK-210ENST00000543751 2400 ntTSL 1 (best) BASIC5.9□□□□□ -1.47
MS4A4AQ96JQ5 FAM216B-201ENST00000313851 3243 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.47
MS4A4AQ96JQ5 CCDC80-201ENST00000206423 12430 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.47
MS4A4AQ96JQ5 SNX18P3-202ENST00000565670 1750 ntBASIC5.9□□□□□ -1.47
MS4A4AQ96JQ5 AC020656.2-201ENST00000613291 5309 ntBASIC5.9□□□□□ -1.47
MS4A4AQ96JQ5 GRIK2-203ENST00000369134 4185 ntTSL 5 BASIC5.9□□□□□ -1.47
MS4A4AQ96JQ5 CEP152-201ENST00000325747 4986 ntAPPRIS ALT2 TSL 1 (best) BASIC5.9□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 108 ms