Protein–RNA interactions for Protein: Q8TAU0

NKX2-3, Homeobox protein Nkx-2.3, humanhuman

Predictions only

Length 364 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-3Q8TAU0 PDE4B-201ENST00000329654 3998 ntTSL 1 (best) BASIC5.71□□□□□ -1.49
NKX2-3Q8TAU0 ZNF468-203ENST00000595646 4407 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
NKX2-3Q8TAU0 RNU6-879P-201ENST00000364328 108 ntBASIC5.71□□□□□ -1.5
NKX2-3Q8TAU0 RNU6-512P-201ENST00000364438 103 ntBASIC5.71□□□□□ -1.5
NKX2-3Q8TAU0 Y_RNA.369-201ENST00000365568 117 ntBASIC5.71□□□□□ -1.5
NKX2-3Q8TAU0 RNU4-17P-201ENST00000365598 141 ntBASIC5.71□□□□□ -1.5
NKX2-3Q8TAU0 RNU6-146P-201ENST00000384602 108 ntBASIC5.71□□□□□ -1.5
NKX2-3Q8TAU0 RNA5SP213-201ENST00000391031 106 ntBASIC5.71□□□□□ -1.5
NKX2-3Q8TAU0 AL117337.1-201ENST00000412789 444 ntTSL 3 BASIC5.71□□□□□ -1.5
NKX2-3Q8TAU0 AL592148.1-201ENST00000413568 445 ntBASIC5.71□□□□□ -1.5
NKX2-3Q8TAU0 AL592078.1-201ENST00000421866 321 ntTSL 3 BASIC5.71□□□□□ -1.5
NKX2-3Q8TAU0 AL136084.2-202ENST00000433997 353 ntTSL 2 BASIC5.71□□□□□ -1.5
NKX2-3Q8TAU0 AC073073.1-201ENST00000493920 463 ntBASIC5.71□□□□□ -1.5
NKX2-3Q8TAU0 AC110767.1-201ENST00000508374 239 ntTSL 3 BASIC5.71□□□□□ -1.5
NKX2-3Q8TAU0 RNA5SP464-201ENST00000516251 108 ntBASIC5.71□□□□□ -1.5
NKX2-3Q8TAU0 NDST1-AS1-201ENST00000519040 368 ntTSL 2 BASIC5.71□□□□□ -1.5
NKX2-3Q8TAU0 DEFB131C-201ENST00000528817 165 ntBASIC5.71□□□□□ -1.5
NKX2-3Q8TAU0 AC022726.1-201ENST00000587475 207 ntBASIC5.71□□□□□ -1.5
NKX2-3Q8TAU0 AL355812.1-201ENST00000603215 216 ntBASIC5.71□□□□□ -1.5
NKX2-3Q8TAU0 CFHR4-202ENST00000367416 2178 ntAPPRIS P1 TSL 2 BASIC5.71□□□□□ -1.5
NKX2-3Q8TAU0 AC103740.1-201ENST00000558888 7427 ntTSL 2 BASIC5.71□□□□□ -1.5
NKX2-3Q8TAU0 PRLR-220ENST00000620785 11063 ntTSL 5 BASIC5.71□□□□□ -1.5
NKX2-3Q8TAU0 AC139713.2-214ENST00000642059 1811 ntBASIC5.71□□□□□ -1.5
NKX2-3Q8TAU0 FILIP1-201ENST00000237172 4580 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
NKX2-3Q8TAU0 AC010300.1-201ENST00000600671 5134 ntBASIC5.71□□□□□ -1.5
NKX2-3Q8TAU0 SLC26A5-207ENST00000393729 2422 ntTSL 5 BASIC5.7□□□□□ -1.5
NKX2-3Q8TAU0 NBPF9-208ENST00000621074 4302 ntTSL 5 BASIC5.7□□□□□ -1.5
NKX2-3Q8TAU0 CACNB4-273ENST00000638091 4061 ntTSL 5 BASIC5.7□□□□□ -1.5
NKX2-3Q8TAU0 SCN1A-218ENST00000640036 8131 ntAPPRIS ALT1 TSL 5 BASIC5.7□□□□□ -1.5
NKX2-3Q8TAU0 RNA5SP52-201ENST00000362448 134 ntBASIC5.7□□□□□ -1.5
NKX2-3Q8TAU0 Y_RNA.123-201ENST00000363338 102 ntBASIC5.7□□□□□ -1.5
NKX2-3Q8TAU0 U8.7-201ENST00000364940 136 ntBASIC5.7□□□□□ -1.5
NKX2-3Q8TAU0 RNU6-1175P-201ENST00000365200 107 ntBASIC5.7□□□□□ -1.5
NKX2-3Q8TAU0 SNORA22-201ENST00000383907 134 ntBASIC5.7□□□□□ -1.5
NKX2-3Q8TAU0 RNU6-843P-201ENST00000384454 104 ntBASIC5.7□□□□□ -1.5
NKX2-3Q8TAU0 U3.22-201ENST00000391120 215 ntBASIC5.7□□□□□ -1.5
NKX2-3Q8TAU0 RNU1-139P-201ENST00000391307 165 ntBASIC5.7□□□□□ -1.5
NKX2-3Q8TAU0 ELOCP19-201ENST00000411919 318 ntBASIC5.7□□□□□ -1.5
NKX2-3Q8TAU0 RPL12P18-201ENST00000437175 325 ntBASIC5.7□□□□□ -1.5
NKX2-3Q8TAU0 RPL35AP21-201ENST00000437667 333 ntBASIC5.7□□□□□ -1.5
NKX2-3Q8TAU0 AC009237.7-201ENST00000447357 229 ntBASIC5.7□□□□□ -1.5
NKX2-3Q8TAU0 TEX41-209ENST00000451478 452 ntTSL 2 BASIC5.7□□□□□ -1.5
NKX2-3Q8TAU0 RPL23AP45-201ENST00000476406 468 ntBASIC5.7□□□□□ -1.5
NKX2-3Q8TAU0 RN7SL558P-201ENST00000497468 299 ntBASIC5.7□□□□□ -1.5
NKX2-3Q8TAU0 AC091868.1-201ENST00000508746 304 ntBASIC5.7□□□□□ -1.5
NKX2-3Q8TAU0 AP001085.1-201ENST00000524441 639 ntTSL 2 BASIC5.7□□□□□ -1.5
NKX2-3Q8TAU0 AC006065.3-201ENST00000541769 419 ntTSL 5 BASIC5.7□□□□□ -1.5
NKX2-3Q8TAU0 MIR5699-201ENST00000578903 90 ntBASIC5.7□□□□□ -1.5
NKX2-3Q8TAU0 AC005046.1-201ENST00000608515 625 ntBASIC5.7□□□□□ -1.5
NKX2-3Q8TAU0 SV2B-201ENST00000330276 11202 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
NKX2-3Q8TAU0 R3HDM1-201ENST00000264160 4648 ntAPPRIS P3 TSL 1 (best) BASIC5.7□□□□□ -1.5
NKX2-3Q8TAU0 PTPRZ1-201ENST00000393386 8175 ntAPPRIS P3 TSL 1 (best) BASIC5.7□□□□□ -1.5
NKX2-3Q8TAU0 GLCE-201ENST00000261858 5037 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
NKX2-3Q8TAU0 TECRL-201ENST00000381210 3573 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
NKX2-3Q8TAU0 RIF1-203ENST00000428287 7722 ntAPPRIS ALT2 TSL 1 (best) BASIC5.69□□□□□ -1.5
NKX2-3Q8TAU0 ARHGAP28-205ENST00000531294 2171 ntAPPRIS ALT2 TSL 5 BASIC5.69□□□□□ -1.5
NKX2-3Q8TAU0 CENPI-202ENST00000372927 3262 ntAPPRIS P3 TSL 5 BASIC5.69□□□□□ -1.5
NKX2-3Q8TAU0 FAM46D-202ENST00000538312 3106 ntAPPRIS P1 TSL 2 BASIC5.69□□□□□ -1.5
NKX2-3Q8TAU0 LRRC49-222ENST00000560158 1898 ntTSL 5 BASIC5.69□□□□□ -1.5
NKX2-3Q8TAU0 TNP2-201ENST00000312693 626 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
NKX2-3Q8TAU0 RNU6-263P-201ENST00000363811 107 ntBASIC5.69□□□□□ -1.5
NKX2-3Q8TAU0 RNU1-64P-201ENST00000365443 163 ntBASIC5.69□□□□□ -1.5
NKX2-3Q8TAU0 RNU6-20P-201ENST00000384106 107 ntBASIC5.69□□□□□ -1.5
NKX2-3Q8TAU0 RNU6-178P-201ENST00000384631 104 ntBASIC5.69□□□□□ -1.5
NKX2-3Q8TAU0 ENSAP1-201ENST00000392855 326 ntBASIC5.69□□□□□ -1.5
NKX2-3Q8TAU0 CACYBP-203ENST00000406752 243 ntTSL 5 BASIC5.69□□□□□ -1.5
NKX2-3Q8TAU0 AC104333.2-201ENST00000422630 192 ntBASIC5.69□□□□□ -1.5
NKX2-3Q8TAU0 RN7SKP49-201ENST00000516675 260 ntBASIC5.69□□□□□ -1.5
NKX2-3Q8TAU0 AC023575.1-201ENST00000580510 358 ntBASIC5.69□□□□□ -1.5
NKX2-3Q8TAU0 AC090616.3-201ENST00000582184 217 ntBASIC5.69□□□□□ -1.5
NKX2-3Q8TAU0 MIR4512-201ENST00000583257 77 ntBASIC5.69□□□□□ -1.5
NKX2-3Q8TAU0 KLKP1-201ENST00000595979 403 ntBASIC5.69□□□□□ -1.5
NKX2-3Q8TAU0 IGKV2OR2-2-201ENST00000605025 300 ntBASIC5.69□□□□□ -1.5
NKX2-3Q8TAU0 AP001005.3-201ENST00000622049 129 ntBASIC5.69□□□□□ -1.5
NKX2-3Q8TAU0 AC034229.5-201ENST00000624258 185 ntBASIC5.69□□□□□ -1.5
NKX2-3Q8TAU0 EIF2AK3-203ENST00000419748 4222 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
NKX2-3Q8TAU0 ANKRD36B-202ENST00000359901 4297 ntAPPRIS P1 TSL 5 BASIC5.69□□□□□ -1.5
NKX2-3Q8TAU0 MTND5P32-201ENST00000560711 1802 ntBASIC5.69□□□□□ -1.5
NKX2-3Q8TAU0 ASAH2-204ENST00000447815 2311 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
NKX2-3Q8TAU0 AL672167.1-204ENST00000641875 3017 ntBASIC5.69□□□□□ -1.5
NKX2-3Q8TAU0 SCN2A-202ENST00000375427 8553 ntAPPRIS ALT1 TSL 5 BASIC5.69□□□□□ -1.5
NKX2-3Q8TAU0 GABRA2-206ENST00000507460 5812 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
NKX2-3Q8TAU0 EMSY-205ENST00000524767 4116 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
NKX2-3Q8TAU0 TLK1P1-201ENST00000456760 2440 ntBASIC5.68□□□□□ -1.5
NKX2-3Q8TAU0 MARCH1-202ENST00000339875 2476 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
NKX2-3Q8TAU0 GUCY1A3-201ENST00000296518 4400 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
NKX2-3Q8TAU0 UNC80-203ENST00000439458 13562 ntAPPRIS P1 TSL 5 BASIC5.68□□□□□ -1.5
NKX2-3Q8TAU0 FTLP6-201ENST00000355274 422 ntBASIC5.68□□□□□ -1.5
NKX2-3Q8TAU0 SNORA70F-201ENST00000384142 135 ntBASIC5.68□□□□□ -1.5
NKX2-3Q8TAU0 AC121342.1-201ENST00000423914 550 ntTSL 3 BASIC5.68□□□□□ -1.5
NKX2-3Q8TAU0 AC005154.2-201ENST00000438110 379 ntBASIC5.68□□□□□ -1.5
NKX2-3Q8TAU0 EIF4A1P11-201ENST00000451239 222 ntBASIC5.68□□□□□ -1.5
NKX2-3Q8TAU0 RPS5P7-201ENST00000456664 608 ntBASIC5.68□□□□□ -1.5
NKX2-3Q8TAU0 RN7SL517P-201ENST00000462240 305 ntBASIC5.68□□□□□ -1.5
NKX2-3Q8TAU0 SUMO2P6-201ENST00000505273 288 ntBASIC5.68□□□□□ -1.5
NKX2-3Q8TAU0 AK3P2-201ENST00000507976 429 ntBASIC5.68□□□□□ -1.5
NKX2-3Q8TAU0 RNU6-567P-201ENST00000516746 107 ntBASIC5.68□□□□□ -1.5
NKX2-3Q8TAU0 RNU6-709P-201ENST00000517257 104 ntBASIC5.68□□□□□ -1.5
NKX2-3Q8TAU0 AC008694.2-201ENST00000517591 306 ntBASIC5.68□□□□□ -1.5
NKX2-3Q8TAU0 AC069029.1-201ENST00000558736 263 ntTSL 2 BASIC5.68□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 99.5 ms