Protein–RNA interactions for Protein: Q6DD88

ATL3, Atlastin-3, humanhuman

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATL3Q6DD88 HIGD1AP2-201ENST00000446367 280 ntBASIC2.4□□□□□ -2.03
ATL3Q6DD88 ZNF736P8Y-201ENST00000451913 669 ntBASIC2.4□□□□□ -2.03
ATL3Q6DD88 AP001486.1-201ENST00000463339 476 ntBASIC2.4□□□□□ -2.03
ATL3Q6DD88 EIF4EP3-201ENST00000498782 656 ntBASIC2.4□□□□□ -2.03
ATL3Q6DD88 RNU6-390P-201ENST00000516259 103 ntBASIC2.4□□□□□ -2.03
ATL3Q6DD88 BTF3P12-201ENST00000519620 469 ntBASIC2.4□□□□□ -2.03
ATL3Q6DD88 DEFB108A-201ENST00000530110 222 ntBASIC2.4□□□□□ -2.03
ATL3Q6DD88 AP000907.2-201ENST00000530827 353 ntBASIC2.4□□□□□ -2.03
ATL3Q6DD88 AC073591.1-201ENST00000552736 597 ntTSL 3 BASIC2.4□□□□□ -2.03
ATL3Q6DD88 LINC01899-202ENST00000583756 575 ntTSL 3 BASIC2.4□□□□□ -2.03
ATL3Q6DD88 RPS15AP11-201ENST00000594193 385 ntBASIC2.4□□□□□ -2.03
ATL3Q6DD88 AC009314.1-201ENST00000603871 304 ntBASIC2.4□□□□□ -2.03
ATL3Q6DD88 AC245884.12-201ENST00000615364 59 ntBASIC2.4□□□□□ -2.03
ATL3Q6DD88 AL161782.1-201ENST00000622930 586 ntTSL 3 BASIC2.4□□□□□ -2.03
ATL3Q6DD88 AC007671.2-201ENST00000637344 619 ntBASIC2.4□□□□□ -2.03
ATL3Q6DD88 EIF2AK2-204ENST00000405334 1533 ntTSL 1 (best) BASIC2.4□□□□□ -2.03
ATL3Q6DD88 PRKD3-201ENST00000234179 5900 ntAPPRIS P1 TSL 1 (best) BASIC2.4□□□□□ -2.03
ATL3Q6DD88 AC110491.1-201ENST00000562191 2010 ntBASIC2.4□□□□□ -2.03
ATL3Q6DD88 MIER3-202ENST00000381199 5188 ntAPPRIS ALT1 TSL 1 (best) BASIC2.4□□□□□ -2.03
ATL3Q6DD88 AC006020.1-201ENST00000420179 1854 ntBASIC2.39□□□□□ -2.03
ATL3Q6DD88 PCDH11Y-203ENST00000362095 4220 ntAPPRIS ALT2 TSL 1 (best) BASIC2.39□□□□□ -2.03
ATL3Q6DD88 HSPE1P11-201ENST00000339579 310 ntBASIC2.39□□□□□ -2.03
ATL3Q6DD88 RNU6-1284P-201ENST00000363701 100 ntBASIC2.39□□□□□ -2.03
ATL3Q6DD88 RNU5A-8P-201ENST00000364102 114 ntBASIC2.39□□□□□ -2.03
ATL3Q6DD88 RNU6-253P-201ENST00000384730 105 ntBASIC2.39□□□□□ -2.03
ATL3Q6DD88 RNU4-72P-201ENST00000410754 173 ntBASIC2.39□□□□□ -2.03
ATL3Q6DD88 AC114763.2-201ENST00000412593 826 ntTSL 2 BASIC2.39□□□□□ -2.03
ATL3Q6DD88 ZNF90P2-204ENST00000419323 1075 ntBASIC2.39□□□□□ -2.03
ATL3Q6DD88 AL593851.1-201ENST00000426171 157 ntBASIC2.39□□□□□ -2.03
ATL3Q6DD88 AL596220.1-202ENST00000429768 314 ntTSL 3 BASIC2.39□□□□□ -2.03
ATL3Q6DD88 AC236972.1-201ENST00000433225 199 ntBASIC2.39□□□□□ -2.03
ATL3Q6DD88 AL080284.1-201ENST00000434493 442 ntTSL 2 BASIC2.39□□□□□ -2.03
ATL3Q6DD88 RPL37P21-201ENST00000435890 276 ntBASIC2.39□□□□□ -2.03
ATL3Q6DD88 AC020594.1-201ENST00000437680 338 ntTSL 3 BASIC2.39□□□□□ -2.03
ATL3Q6DD88 AL008629.1-201ENST00000438615 184 ntBASIC2.39□□□□□ -2.03
ATL3Q6DD88 AC073342.1-202ENST00000446192 457 ntTSL 5 BASIC2.39□□□□□ -2.03
ATL3Q6DD88 COX6CP12-201ENST00000446748 202 ntBASIC2.39□□□□□ -2.03
ATL3Q6DD88 AC006042.4-201ENST00000451066 692 ntTSL 5 BASIC2.39□□□□□ -2.03
ATL3Q6DD88 MIR4435-2HG-213ENST00000451884 423 ntTSL 3 BASIC2.39□□□□□ -2.03
ATL3Q6DD88 AC010976.1-211ENST00000454503 644 ntTSL 2 BASIC2.39□□□□□ -2.03
ATL3Q6DD88 LINC01038-201ENST00000457858 428 ntTSL 3 BASIC2.39□□□□□ -2.03
ATL3Q6DD88 LINC00709-201ENST00000458168 494 ntTSL 2 BASIC2.39□□□□□ -2.03
ATL3Q6DD88 RPL23AP41-201ENST00000484754 458 ntBASIC2.39□□□□□ -2.03
ATL3Q6DD88 RPS29P20-201ENST00000489592 171 ntBASIC2.39□□□□□ -2.03
ATL3Q6DD88 AC105252.1-201ENST00000503089 286 ntBASIC2.39□□□□□ -2.03
ATL3Q6DD88 RNU6-201P-201ENST00000517100 61 ntBASIC2.39□□□□□ -2.03
ATL3Q6DD88 EEF1A1P37-201ENST00000522748 715 ntBASIC2.39□□□□□ -2.03
ATL3Q6DD88 LINC02545-201ENST00000525381 306 ntTSL 3 BASIC2.39□□□□□ -2.03
ATL3Q6DD88 MTATP6P15-201ENST00000527233 835 ntBASIC2.39□□□□□ -2.03
ATL3Q6DD88 AL356432.3-201ENST00000568952 465 ntBASIC2.39□□□□□ -2.03
ATL3Q6DD88 SNORD53-201ENST00000579969 78 ntBASIC2.39□□□□□ -2.03
ATL3Q6DD88 AC069114.1-201ENST00000580927 287 ntTSL 2 BASIC2.39□□□□□ -2.03
ATL3Q6DD88 AC097467.3-208ENST00000593486 670 ntTSL 5 BASIC2.39□□□□□ -2.03
ATL3Q6DD88 OR10AB1P-201ENST00000609613 938 ntBASIC2.39□□□□□ -2.03
ATL3Q6DD88 SOX2OT_exon1.1-201ENST00000614902 232 ntBASIC2.39□□□□□ -2.03
ATL3Q6DD88 HMGB1P24-202ENST00000615653 685 ntBASIC2.39□□□□□ -2.03
ATL3Q6DD88 AC007998.5-201ENST00000622938 237 ntBASIC2.39□□□□□ -2.03
ATL3Q6DD88 SEPT14P19-202ENST00000632397 370 ntTSL 3 BASIC2.39□□□□□ -2.03
ATL3Q6DD88 AC104454.1-201ENST00000421341 1401 ntBASIC2.39□□□□□ -2.03
ATL3Q6DD88 AL136360.1-201ENST00000503377 1900 ntBASIC2.38□□□□□ -2.03
ATL3Q6DD88 PTPRQ-209ENST00000616559 8165 ntTSL 5 BASIC2.38□□□□□ -2.03
ATL3Q6DD88 ELF2P3-201ENST00000445099 1506 ntBASIC2.38□□□□□ -2.03
ATL3Q6DD88 RNA5SP160-201ENST00000364866 120 ntBASIC2.38□□□□□ -2.03
ATL3Q6DD88 AL390198.1-201ENST00000376445 320 ntTSL 2 BASIC2.38□□□□□ -2.03
ATL3Q6DD88 TRDJ1-201ENST00000390473 51 ntAPPRIS P1 BASIC2.38□□□□□ -2.03
ATL3Q6DD88 RPL26P27-201ENST00000414397 437 ntBASIC2.38□□□□□ -2.03
ATL3Q6DD88 HIGD1AP15-201ENST00000416198 280 ntBASIC2.38□□□□□ -2.03
ATL3Q6DD88 AL391336.1-201ENST00000424678 484 ntTSL 3 BASIC2.38□□□□□ -2.03
ATL3Q6DD88 SKA2P1-201ENST00000425592 390 ntBASIC2.38□□□□□ -2.03
ATL3Q6DD88 MED14P1-201ENST00000430517 648 ntBASIC2.38□□□□□ -2.03
ATL3Q6DD88 AL445488.1-202ENST00000430623 545 ntTSL 3 BASIC2.38□□□□□ -2.03
ATL3Q6DD88 MICF-203ENST00000432679 129 ntBASIC2.38□□□□□ -2.03
ATL3Q6DD88 MTND1P28-201ENST00000435623 950 ntBASIC2.38□□□□□ -2.03
ATL3Q6DD88 AL139237.2-201ENST00000438454 493 ntTSL 3 BASIC2.38□□□□□ -2.03
ATL3Q6DD88 GPX5-203ENST00000469384 428 ntTSL 1 (best) BASIC2.38□□□□□ -2.03
ATL3Q6DD88 AC072039.1-201ENST00000477611 581 ntBASIC2.38□□□□□ -2.03
ATL3Q6DD88 CSN1S1-202ENST00000505782 871 ntAPPRIS ALT2 TSL 5 BASIC2.38□□□□□ -2.03
ATL3Q6DD88 PCAT4-202ENST00000514836 373 ntTSL 3 BASIC2.38□□□□□ -2.03
ATL3Q6DD88 RNU6-1129P-201ENST00000515964 104 ntBASIC2.38□□□□□ -2.03
ATL3Q6DD88 RNU4ATAC17P-201ENST00000517272 120 ntBASIC2.38□□□□□ -2.03
ATL3Q6DD88 AC025524.2-207ENST00000520097 506 ntTSL 3 BASIC2.38□□□□□ -2.03
ATL3Q6DD88 AC009063.1-201ENST00000563342 702 ntBASIC2.38□□□□□ -2.03
ATL3Q6DD88 AC009094.1-201ENST00000564443 426 ntBASIC2.38□□□□□ -2.03
ATL3Q6DD88 AC091489.2-201ENST00000566263 604 ntBASIC2.38□□□□□ -2.03
ATL3Q6DD88 AC002400.1-201ENST00000569310 726 ntBASIC2.38□□□□□ -2.03
ATL3Q6DD88 AC009127.3-201ENST00000570531 403 ntBASIC2.38□□□□□ -2.03
ATL3Q6DD88 AC007151.1-201ENST00000572774 483 ntBASIC2.38□□□□□ -2.03
ATL3Q6DD88 AC091043.1-201ENST00000579830 453 ntTSL 3 BASIC2.38□□□□□ -2.03
ATL3Q6DD88 MIR3146-201ENST00000580367 79 ntBASIC2.38□□□□□ -2.03
ATL3Q6DD88 KC877982.1-201ENST00000602313 470 ntBASIC2.38□□□□□ -2.03
ATL3Q6DD88 DPPA3P3-201ENST00000603842 430 ntBASIC2.38□□□□□ -2.03
ATL3Q6DD88 AL161798.1-201ENST00000604630 131 ntBASIC2.38□□□□□ -2.03
ATL3Q6DD88 MTND4LP5-201ENST00000605152 292 ntBASIC2.38□□□□□ -2.03
ATL3Q6DD88 AC004805.2-201ENST00000605382 482 ntBASIC2.38□□□□□ -2.03
ATL3Q6DD88 RNF219-AS1-205ENST00000605996 792 ntTSL 5 BASIC2.38□□□□□ -2.03
ATL3Q6DD88 AC022017.1-201ENST00000608793 559 ntTSL 4 BASIC2.38□□□□□ -2.03
ATL3Q6DD88 AC108747.1-201ENST00000609508 535 ntBASIC2.38□□□□□ -2.03
ATL3Q6DD88 DUXAP9-208ENST00000622815 614 ntBASIC2.38□□□□□ -2.03
ATL3Q6DD88 AP002791.1-201ENST00000623291 381 ntBASIC2.38□□□□□ -2.03
ATL3Q6DD88 AC012593.1-211ENST00000625996 799 ntTSL 5 BASIC2.38□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 92.9 ms