Protein–RNA interactions for Protein: Q5XG99

LYSMD4, LysM and putative peptidoglycan-binding domain-containing protein 4, humanhuman

Predictions only

Length 296 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD4Q5XG99 RNU2-52P-201ENST00000410680 190 ntBASIC2.86□□□□□ -1.95
LYSMD4Q5XG99 RPL32P35-201ENST00000415214 394 ntBASIC2.86□□□□□ -1.95
LYSMD4Q5XG99 AC073311.1-201ENST00000420146 505 ntTSL 5 BASIC2.86□□□□□ -1.95
LYSMD4Q5XG99 HMGB3P12-201ENST00000438745 556 ntBASIC2.86□□□□□ -1.95
LYSMD4Q5XG99 DDX3P2-201ENST00000446138 111 ntBASIC2.86□□□□□ -1.95
LYSMD4Q5XG99 AL136380.1-201ENST00000447970 162 ntBASIC2.86□□□□□ -1.95
LYSMD4Q5XG99 RPL37P4-201ENST00000448908 268 ntBASIC2.86□□□□□ -1.95
LYSMD4Q5XG99 HMGB3P8-201ENST00000449709 577 ntBASIC2.86□□□□□ -1.95
LYSMD4Q5XG99 PTPRG-AS1-210ENST00000498655 547 ntTSL 4 BASIC2.86□□□□□ -1.95
LYSMD4Q5XG99 AC124854.1-202ENST00000513779 339 ntTSL 3 BASIC2.86□□□□□ -1.95
LYSMD4Q5XG99 RNA5SP217-201ENST00000515959 91 ntBASIC2.86□□□□□ -1.95
LYSMD4Q5XG99 RNA5SP471-201ENST00000516971 106 ntBASIC2.86□□□□□ -1.95
LYSMD4Q5XG99 SCARNA20.6-201ENST00000517251 106 ntBASIC2.86□□□□□ -1.95
LYSMD4Q5XG99 AC022360.2-202ENST00000517308 407 ntTSL 3 BASIC2.86□□□□□ -1.95
LYSMD4Q5XG99 AC060765.1-201ENST00000522776 544 ntTSL 4 BASIC2.86□□□□□ -1.95
LYSMD4Q5XG99 AC090023.1-201ENST00000545750 443 ntTSL 3 BASIC2.86□□□□□ -1.95
LYSMD4Q5XG99 AL352955.1-201ENST00000555490 332 ntTSL 3 BASIC2.86□□□□□ -1.95
LYSMD4Q5XG99 AC005154.1-222ENST00000579024 341 ntTSL 5 BASIC2.86□□□□□ -1.95
LYSMD4Q5XG99 AC080078.2-201ENST00000603766 501 ntBASIC2.86□□□□□ -1.95
LYSMD4Q5XG99 AC098826.3-201ENST00000603823 466 ntBASIC2.86□□□□□ -1.95
LYSMD4Q5XG99 AL391646.1-201ENST00000603860 190 ntBASIC2.86□□□□□ -1.95
LYSMD4Q5XG99 Z84480.1-201ENST00000605131 311 ntBASIC2.86□□□□□ -1.95
LYSMD4Q5XG99 AL121992.2-201ENST00000606262 256 ntBASIC2.86□□□□□ -1.95
LYSMD4Q5XG99 AP002360.4-201ENST00000606980 481 ntBASIC2.86□□□□□ -1.95
LYSMD4Q5XG99 DPY19L1-208ENST00000612226 607 ntTSL 1 (best) BASIC2.86□□□□□ -1.95
LYSMD4Q5XG99 C4orf22-209ENST00000621014 228 ntTSL 3 BASIC2.86□□□□□ -1.95
LYSMD4Q5XG99 AL359757.2-201ENST00000624309 274 ntBASIC2.86□□□□□ -1.95
LYSMD4Q5XG99 AC099654.12-201ENST00000639868 649 ntBASIC2.86□□□□□ -1.95
LYSMD4Q5XG99 PRKG2-206ENST00000545647 3852 ntTSL 5 BASIC2.86□□□□□ -1.95
LYSMD4Q5XG99 TMPRSS11A-202ENST00000508048 3247 ntAPPRIS ALT2 TSL 1 (best) BASIC2.86□□□□□ -1.95
LYSMD4Q5XG99 AC022336.2-201ENST00000568966 2538 ntBASIC2.86□□□□□ -1.95
LYSMD4Q5XG99 RAPGEF6-202ENST00000308008 4176 ntTSL 1 (best) BASIC2.86□□□□□ -1.95
LYSMD4Q5XG99 NOC3L-201ENST00000371361 3455 ntAPPRIS P1 TSL 1 (best) BASIC2.85□□□□□ -1.95
LYSMD4Q5XG99 CR848007.1-201ENST00000442354 1699 ntBASIC2.85□□□□□ -1.95
LYSMD4Q5XG99 PICALM-209ENST00000528398 2049 ntTSL 2 BASIC2.85□□□□□ -1.95
LYSMD4Q5XG99 SYTL2-230ENST00000634661 6672 ntTSL 5 BASIC2.85□□□□□ -1.95
LYSMD4Q5XG99 UBE2L2-201ENST00000254302 429 ntBASIC2.85□□□□□ -1.95
LYSMD4Q5XG99 HSFY1-202ENST00000309834 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC2.85□□□□□ -1.95
LYSMD4Q5XG99 HSFY2-202ENST00000344884 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC2.85□□□□□ -1.95
LYSMD4Q5XG99 SMIM11P1-201ENST00000369586 178 ntBASIC2.85□□□□□ -1.95
LYSMD4Q5XG99 RNU6-14P-201ENST00000384630 106 ntBASIC2.85□□□□□ -1.95
LYSMD4Q5XG99 MIR1-2-201ENST00000384961 85 ntBASIC2.85□□□□□ -1.95
LYSMD4Q5XG99 AL360182.1-201ENST00000397433 468 ntBASIC2.85□□□□□ -1.95
LYSMD4Q5XG99 MIR1261-201ENST00000408659 82 ntBASIC2.85□□□□□ -1.95
LYSMD4Q5XG99 AL365356.1-201ENST00000411512 736 ntTSL 3 BASIC2.85□□□□□ -1.95
LYSMD4Q5XG99 AC114491.1-201ENST00000416095 246 ntBASIC2.85□□□□□ -1.95
LYSMD4Q5XG99 AC099548.1-201ENST00000421443 426 ntBASIC2.85□□□□□ -1.95
LYSMD4Q5XG99 AC005062.1-206ENST00000424516 710 ntTSL 3 BASIC2.85□□□□□ -1.95
LYSMD4Q5XG99 AC133104.1-201ENST00000429100 218 ntBASIC2.85□□□□□ -1.95
LYSMD4Q5XG99 ARL5AP4-201ENST00000430731 512 ntBASIC2.85□□□□□ -1.95
LYSMD4Q5XG99 AL033504.1-204ENST00000434985 413 ntTSL 2 BASIC2.85□□□□□ -1.95
LYSMD4Q5XG99 MTND1P34-201ENST00000438556 671 ntBASIC2.85□□□□□ -1.95
LYSMD4Q5XG99 AL035258.1-201ENST00000439450 439 ntTSL 3 BASIC2.85□□□□□ -1.95
LYSMD4Q5XG99 AC025428.1-201ENST00000444137 403 ntTSL 3 BASIC2.85□□□□□ -1.95
LYSMD4Q5XG99 SFTA1P-203ENST00000446372 693 ntTSL 1 (best) BASIC2.85□□□□□ -1.95
LYSMD4Q5XG99 AC132479.1-201ENST00000449160 144 ntBASIC2.85□□□□□ -1.95
LYSMD4Q5XG99 AC093392.2-201ENST00000450682 337 ntBASIC2.85□□□□□ -1.95
LYSMD4Q5XG99 TRBV12-1-201ENST00000479785 344 ntBASIC2.85□□□□□ -1.95
LYSMD4Q5XG99 AC107401.1-201ENST00000503426 685 ntBASIC2.85□□□□□ -1.95
LYSMD4Q5XG99 RPS3A-208ENST00000509736 576 ntTSL 2 BASIC2.85□□□□□ -1.95
LYSMD4Q5XG99 AC005920.2-201ENST00000509833 332 ntTSL 3 BASIC2.85□□□□□ -1.95
LYSMD4Q5XG99 AP003498.1-201ENST00000532530 347 ntTSL 3 BASIC2.85□□□□□ -1.95
LYSMD4Q5XG99 AHI1-217ENST00000534469 680 ntTSL 3 BASIC2.85□□□□□ -1.95
LYSMD4Q5XG99 AC090531.1-202ENST00000548450 499 ntTSL 3 BASIC2.85□□□□□ -1.95
LYSMD4Q5XG99 AL845331.3-202ENST00000562856 261 ntBASIC2.85□□□□□ -1.95
LYSMD4Q5XG99 AC068135.2-201ENST00000569293 1028 ntBASIC2.85□□□□□ -1.95
LYSMD4Q5XG99 AC104763.2-201ENST00000604179 382 ntBASIC2.85□□□□□ -1.95
LYSMD4Q5XG99 AL161798.1-201ENST00000604630 131 ntBASIC2.85□□□□□ -1.95
LYSMD4Q5XG99 GPR171-203ENST00000617554 960 ntAPPRIS P1 BASIC2.85□□□□□ -1.95
LYSMD4Q5XG99 AC215522.3-201ENST00000635602 354 ntTSL 5 BASIC2.85□□□□□ -1.95
LYSMD4Q5XG99 MIR6863-201ENST00000636112 90 ntBASIC2.85□□□□□ -1.95
LYSMD4Q5XG99 PARPBP-201ENST00000327680 3014 ntAPPRIS P1 TSL 2 BASIC2.85□□□□□ -1.95
LYSMD4Q5XG99 LCOR-205ENST00000421806 16004 ntTSL 3 BASIC2.85□□□□□ -1.95
LYSMD4Q5XG99 GABRG2-229ENST00000641017 3628 ntBASIC2.85□□□□□ -1.95
LYSMD4Q5XG99 GMFB-208ENST00000554908 6721 ntTSL 1 (best) BASIC2.85□□□□□ -1.95
LYSMD4Q5XG99 DNAH12-208ENST00000495027 12146 ntAPPRIS P1 TSL 5 BASIC2.85□□□□□ -1.95
LYSMD4Q5XG99 AC091564.4-201ENST00000533934 2194 ntBASIC2.84□□□□□ -1.95
LYSMD4Q5XG99 DCLRE1A-202ENST00000369305 4241 ntAPPRIS P1 TSL 5 BASIC2.84□□□□□ -1.95
LYSMD4Q5XG99 AC027514.1-201ENST00000588561 1603 ntBASIC2.84□□□□□ -1.95
LYSMD4Q5XG99 LINC00305-201ENST00000323355 873 ntTSL 1 (best) BASIC2.84□□□□□ -1.95
LYSMD4Q5XG99 AC073343.1-201ENST00000328239 651 ntBASIC2.84□□□□□ -1.95
LYSMD4Q5XG99 RNU6-859P-201ENST00000362728 107 ntBASIC2.84□□□□□ -1.95
LYSMD4Q5XG99 Y_RNA.159-201ENST00000363674 87 ntBASIC2.84□□□□□ -1.95
LYSMD4Q5XG99 RNU6-512P-201ENST00000364438 103 ntBASIC2.84□□□□□ -1.95
LYSMD4Q5XG99 RNU6-456P-201ENST00000384493 107 ntBASIC2.84□□□□□ -1.95
LYSMD4Q5XG99 Y_RNA.554-201ENST00000384672 102 ntBASIC2.84□□□□□ -1.95
LYSMD4Q5XG99 MIR34A-201ENST00000385130 110 ntBASIC2.84□□□□□ -1.95
LYSMD4Q5XG99 RNU6-817P-201ENST00000391083 104 ntBASIC2.84□□□□□ -1.95
LYSMD4Q5XG99 OR5H8-201ENST00000394191 1045 ntAPPRIS P1 BASIC2.84□□□□□ -1.95
LYSMD4Q5XG99 CALM2P3-201ENST00000400429 449 ntBASIC2.84□□□□□ -1.95
LYSMD4Q5XG99 PSMA4-202ENST00000413382 1019 ntTSL 1 (best) BASIC2.84□□□□□ -1.95
LYSMD4Q5XG99 AL592148.1-201ENST00000413568 445 ntBASIC2.84□□□□□ -1.95
LYSMD4Q5XG99 SDCBPP3-201ENST00000419629 891 ntBASIC2.84□□□□□ -1.95
LYSMD4Q5XG99 DPPA2P1-201ENST00000428060 556 ntBASIC2.84□□□□□ -1.95
LYSMD4Q5XG99 PCDH9-AS1-201ENST00000430861 532 ntTSL 2 BASIC2.84□□□□□ -1.95
LYSMD4Q5XG99 AP000477.2-201ENST00000447405 778 ntTSL 3 BASIC2.84□□□□□ -1.95
LYSMD4Q5XG99 RPS29P12-201ENST00000460178 152 ntBASIC2.84□□□□□ -1.95
LYSMD4Q5XG99 LINC01323-201ENST00000486767 576 ntTSL 3 BASIC2.84□□□□□ -1.95
LYSMD4Q5XG99 AC092666.1-201ENST00000492054 573 ntTSL 4 BASIC2.84□□□□□ -1.95
LYSMD4Q5XG99 SUB1-206ENST00000506237 908 ntAPPRIS P1 TSL 2 BASIC2.84□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 82.6 ms