Protein–RNA interactions for Protein: Q07654

TFF3, Trefoil factor 3, humanhuman

Predictions only

Length 80 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TFF3Q07654 MIR424-201ENST00000362227 98 ntBASIC0.37□□□□□ -2.35
TFF3Q07654 MEIG1-201ENST00000378240 507 ntAPPRIS P1 TSL 2 BASIC0.37□□□□□ -2.35
TFF3Q07654 RNU6-198P-201ENST00000384258 104 ntBASIC0.37□□□□□ -2.35
TFF3Q07654 HMGN2P39-201ENST00000398005 273 ntBASIC0.37□□□□□ -2.35
TFF3Q07654 RNU6-272P-201ENST00000411028 104 ntBASIC0.37□□□□□ -2.35
TFF3Q07654 MAGI2-AS1-201ENST00000428298 472 ntTSL 3 BASIC0.37□□□□□ -2.35
TFF3Q07654 AL645638.1-201ENST00000440519 361 ntBASIC0.37□□□□□ -2.35
TFF3Q07654 FAR2P1-203ENST00000440931 187 ntTSL 2 BASIC0.37□□□□□ -2.35
TFF3Q07654 AL356270.1-201ENST00000456587 522 ntTSL 3 BASIC0.37□□□□□ -2.35
TFF3Q07654 AC134050.1-201ENST00000495088 933 ntBASIC0.37□□□□□ -2.35
TFF3Q07654 AC098591.2-201ENST00000510152 315 ntBASIC0.37□□□□□ -2.35
TFF3Q07654 AC093879.2-201ENST00000513645 427 ntTSL 3 BASIC0.37□□□□□ -2.35
TFF3Q07654 CYCSP23-201ENST00000519781 313 ntBASIC0.37□□□□□ -2.35
TFF3Q07654 AP006587.4-201ENST00000526053 529 ntBASIC0.37□□□□□ -2.35
TFF3Q07654 OR6C7P-201ENST00000547875 934 ntBASIC0.37□□□□□ -2.35
TFF3Q07654 AL157402.2-201ENST00000566394 416 ntTSL 3 BASIC0.37□□□□□ -2.35
TFF3Q07654 AC007953.2-201ENST00000603299 193 ntTSL 5 BASIC0.37□□□□□ -2.35
TFF3Q07654 MINPP1-204ENST00000536010 2215 ntTSL 1 (best) BASIC0.36□□□□□ -2.35
TFF3Q07654 CXADR-202ENST00000356275 270 ntTSL 1 (best) BASIC0.36□□□□□ -2.35
TFF3Q07654 MIR10B-201ENST00000385011 110 ntBASIC0.36□□□□□ -2.35
TFF3Q07654 MIR767-201ENST00000390228 109 ntBASIC0.36□□□□□ -2.35
TFF3Q07654 TRDJ3-201ENST00000390476 59 ntAPPRIS P1 BASIC0.36□□□□□ -2.35
TFF3Q07654 FO680682.1-201ENST00000421261 345 ntTSL 3 BASIC0.36□□□□□ -2.35
TFF3Q07654 TMEM167AP1-201ENST00000423409 219 ntBASIC0.36□□□□□ -2.35
TFF3Q07654 VN1R42P-201ENST00000424651 344 ntBASIC0.36□□□□□ -2.35
TFF3Q07654 HMGN1P33-201ENST00000432945 451 ntBASIC0.36□□□□□ -2.35
TFF3Q07654 OPA1-AS1-201ENST00000433105 492 ntTSL 3 BASIC0.36□□□□□ -2.35
TFF3Q07654 AC011998.3-201ENST00000457053 254 ntTSL 3 BASIC0.36□□□□□ -2.35
TFF3Q07654 NAA50-206ENST00000493454 964 ntTSL 2 BASIC0.36□□□□□ -2.35
TFF3Q07654 GYPA-209ENST00000512789 258 ntTSL 1 (best) BASIC0.36□□□□□ -2.35
TFF3Q07654 SNORA48.10-201ENST00000516965 160 ntBASIC0.36□□□□□ -2.35
TFF3Q07654 AL035078.1-202ENST00000531627 413 ntTSL 2 BASIC0.36□□□□□ -2.35
TFF3Q07654 MIR3609-201ENST00000582661 80 ntBASIC0.36□□□□□ -2.35
TFF3Q07654 AC069304.3-201ENST00000603938 1084 ntBASIC0.36□□□□□ -2.35
TFF3Q07654 AC024595.1-201ENST00000623088 387 ntBASIC0.36□□□□□ -2.35
TFF3Q07654 AP006248.3-201ENST00000623580 594 ntBASIC0.36□□□□□ -2.35
TFF3Q07654 HMHB1-202ENST00000638299 126 ntAPPRIS P2 TSL 1 (best) BASIC0.36□□□□□ -2.35
TFF3Q07654 AGR3-201ENST00000310398 749 ntAPPRIS P1 TSL 1 (best) BASIC0.35□□□□□ -2.35
TFF3Q07654 Y_RNA.67-201ENST00000362870 100 ntBASIC0.35□□□□□ -2.35
TFF3Q07654 Y_RNA.68-201ENST00000362881 102 ntBASIC0.35□□□□□ -2.35
TFF3Q07654 KRTAP22-2-201ENST00000382830 293 ntAPPRIS P1 BASIC0.35□□□□□ -2.35
TFF3Q07654 SNORA50A-201ENST00000384225 134 ntBASIC0.35□□□□□ -2.35
TFF3Q07654 RN7SKP200-201ENST00000410564 320 ntBASIC0.35□□□□□ -2.35
TFF3Q07654 AL365184.1-201ENST00000413801 572 ntTSL 3 BASIC0.35□□□□□ -2.35
TFF3Q07654 USP9YP35-201ENST00000435696 412 ntBASIC0.35□□□□□ -2.35
TFF3Q07654 SNRPEP7-201ENST00000438350 220 ntBASIC0.35□□□□□ -2.35
TFF3Q07654 AL117336.1-201ENST00000439198 380 ntTSL 2 BASIC0.35□□□□□ -2.35
TFF3Q07654 AL035666.1-201ENST00000446195 348 ntBASIC0.35□□□□□ -2.35
TFF3Q07654 HMGB1P36-201ENST00000487709 576 ntBASIC0.35□□□□□ -2.35
TFF3Q07654 EPGN-204ENST00000502358 312 ntTSL 1 (best) BASIC0.35□□□□□ -2.35
TFF3Q07654 EPGN-206ENST00000503098 339 ntTSL 1 (best) BASIC0.35□□□□□ -2.35
TFF3Q07654 LRRC34P2-201ENST00000514850 553 ntBASIC0.35□□□□□ -2.35
TFF3Q07654 SCARNA11.3-201ENST00000517276 130 ntBASIC0.35□□□□□ -2.35
TFF3Q07654 AC114550.2-201ENST00000524008 397 ntTSL 3 BASIC0.35□□□□□ -2.35
TFF3Q07654 AC055878.1-201ENST00000531858 281 ntTSL 3 BASIC0.35□□□□□ -2.35
TFF3Q07654 AC136932.1-201ENST00000574771 208 ntBASIC0.35□□□□□ -2.35
TFF3Q07654 CYP2C61P-201ENST00000604072 290 ntBASIC0.35□□□□□ -2.35
TFF3Q07654 AP000654.2-201ENST00000605633 586 ntBASIC0.35□□□□□ -2.35
TFF3Q07654 AC004852.3-201ENST00000614131 326 ntBASIC0.35□□□□□ -2.35
TFF3Q07654 DLEU1_2.1-201ENST00000617920 342 ntBASIC0.35□□□□□ -2.35
TFF3Q07654 ZRANB2-AS2-222ENST00000625045 1014 ntTSL 5 BASIC0.35□□□□□ -2.35
TFF3Q07654 CD44-239ENST00000639002 528 ntTSL 1 (best) BASIC0.35□□□□□ -2.35
TFF3Q07654 DIRC1-201ENST00000308100 1037 ntAPPRIS P1 TSL 1 (best) BASIC0.34□□□□□ -2.36
TFF3Q07654 MTND4P11-201ENST00000417020 1058 ntBASIC0.34□□□□□ -2.36
TFF3Q07654 AC009518.2-201ENST00000418056 731 ntBASIC0.34□□□□□ -2.36
TFF3Q07654 AC097463.2-201ENST00000421074 142 ntBASIC0.34□□□□□ -2.36
TFF3Q07654 AC099548.1-201ENST00000421443 426 ntBASIC0.34□□□□□ -2.36
TFF3Q07654 RPL7L1P10-201ENST00000427790 463 ntBASIC0.34□□□□□ -2.36
TFF3Q07654 OR51AB1P-201ENST00000429046 620 ntBASIC0.34□□□□□ -2.36
TFF3Q07654 AL050349.1-201ENST00000441029 401 ntTSL 2 BASIC0.34□□□□□ -2.36
TFF3Q07654 AL359385.1-201ENST00000456509 365 ntBASIC0.34□□□□□ -2.36
TFF3Q07654 RNU4-57P-201ENST00000515980 135 ntBASIC0.34□□□□□ -2.36
TFF3Q07654 RNA5SP137-201ENST00000516833 135 ntBASIC0.34□□□□□ -2.36
TFF3Q07654 AC021785.1-201ENST00000520780 453 ntTSL 3 BASIC0.34□□□□□ -2.36
TFF3Q07654 AC090888.1-201ENST00000561335 1141 ntBASIC0.34□□□□□ -2.36
TFF3Q07654 AC091043.1-201ENST00000579830 453 ntTSL 3 BASIC0.34□□□□□ -2.36
TFF3Q07654 AC018638.7-201ENST00000605836 1114 ntBASIC0.34□□□□□ -2.36
TFF3Q07654 AL121890.5-201ENST00000620848 304 ntBASIC0.34□□□□□ -2.36
TFF3Q07654 AC022513.1-201ENST00000624512 117 ntBASIC0.34□□□□□ -2.36
TFF3Q07654 Z69720.2-201ENST00000624755 279 ntBASIC0.34□□□□□ -2.36
TFF3Q07654 AC092192.1-201ENST00000633154 1018 ntBASIC0.34□□□□□ -2.36
TFF3Q07654 TXNDC8-203ENST00000374511 472 ntAPPRIS ALT2 TSL 5 BASIC0.33□□□□□ -2.36
TFF3Q07654 SNORA29-201ENST00000384183 140 ntBASIC0.33□□□□□ -2.36
TFF3Q07654 EDDM3CP-201ENST00000415977 425 ntBASIC0.33□□□□□ -2.36
TFF3Q07654 AL049765.1-201ENST00000416237 573 ntTSL 5 BASIC0.33□□□□□ -2.36
TFF3Q07654 AC073614.1-201ENST00000438690 650 ntBASIC0.33□□□□□ -2.36
TFF3Q07654 AC018693.1-201ENST00000442829 550 ntTSL 4 BASIC0.33□□□□□ -2.36
TFF3Q07654 ARPC3P5-201ENST00000448802 534 ntBASIC0.33□□□□□ -2.36
TFF3Q07654 AC079140.2-201ENST00000506193 142 ntBASIC0.33□□□□□ -2.36
TFF3Q07654 RNU6-943P-201ENST00000516960 98 ntBASIC0.33□□□□□ -2.36
TFF3Q07654 AC068992.1-202ENST00000519280 270 ntTSL 3 BASIC0.33□□□□□ -2.36
TFF3Q07654 RERG-IT1-201ENST00000539734 301 ntTSL 3 BASIC0.33□□□□□ -2.36
TFF3Q07654 AC021739.1-201ENST00000559631 174 ntBASIC0.33□□□□□ -2.36
TFF3Q07654 MIR4514-201ENST00000581410 57 ntBASIC0.33□□□□□ -2.36
TFF3Q07654 HMGN1P30-201ENST00000589286 268 ntBASIC0.33□□□□□ -2.36
TFF3Q07654 AC023932.2-201ENST00000603176 175 ntBASIC0.33□□□□□ -2.36
TFF3Q07654 AC009974.1-201ENST00000608881 455 ntBASIC0.33□□□□□ -2.36
TFF3Q07654 MIR6864-201ENST00000617935 70 ntBASIC0.33□□□□□ -2.36
TFF3Q07654 CEP57L1-223ENST00000523787 2522 ntAPPRIS ALT2 TSL 5 BASIC0.33□□□□□ -2.36
TFF3Q07654 AC079150.1-201ENST00000413043 383 ntTSL 3 BASIC0.32□□□□□ -2.36
Retrieved 100 of 98,524 protein–RNA pairs in 110.6 ms