Protein–RNA interactions for Protein: P56159

GFRA1, GDNF family receptor alpha-1, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GFRA1P56159 COPG2-201ENST00000330992 3073 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
GFRA1P56159 MACF1-203ENST00000361689 17538 ntTSL 5 BASIC3.98□□□□□ -1.77
GFRA1P56159 AC092650.1-201ENST00000447571 1808 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
GFRA1P56159 SGIP1-204ENST00000371039 4080 ntAPPRIS ALT2 TSL 1 (best) BASIC3.97□□□□□ -1.77
GFRA1P56159 KCNJ1-202ENST00000324036 2614 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
GFRA1P56159 THOC1-221ENST00000631280 2011 ntTSL 5 BASIC3.97□□□□□ -1.77
GFRA1P56159 MUC15-201ENST00000281268 2968 ntTSL 5 BASIC3.97□□□□□ -1.77
GFRA1P56159 ABCA8-215ENST00000615593 3264 ntTSL 5 BASIC3.97□□□□□ -1.77
GFRA1P56159 ARHGAP42-201ENST00000298815 4752 ntAPPRIS P1 TSL 5 BASIC3.97□□□□□ -1.77
GFRA1P56159 SRP72P2-201ENST00000344851 1979 ntBASIC3.97□□□□□ -1.77
GFRA1P56159 MIR331-201ENST00000362302 94 ntBASIC3.97□□□□□ -1.77
GFRA1P56159 RNA5SP307-201ENST00000362863 116 ntBASIC3.97□□□□□ -1.77
GFRA1P56159 Y_RNA.126-201ENST00000363382 111 ntBASIC3.97□□□□□ -1.77
GFRA1P56159 RNU6-595P-201ENST00000363944 107 ntBASIC3.97□□□□□ -1.77
GFRA1P56159 RNU6-336P-201ENST00000364891 107 ntBASIC3.97□□□□□ -1.77
GFRA1P56159 RNU6-702P-201ENST00000364982 107 ntBASIC3.97□□□□□ -1.77
GFRA1P56159 RHOT1P2-201ENST00000366423 333 ntBASIC3.97□□□□□ -1.77
GFRA1P56159 RNU1-73P-201ENST00000383971 164 ntBASIC3.97□□□□□ -1.77
GFRA1P56159 MIR888-201ENST00000401186 77 ntBASIC3.97□□□□□ -1.77
GFRA1P56159 RPS29P13-201ENST00000402041 169 ntBASIC3.97□□□□□ -1.77
GFRA1P56159 SNORA11F-201ENST00000408237 128 ntBASIC3.97□□□□□ -1.77
GFRA1P56159 SNORA74C-2-201ENST00000411179 201 ntBASIC3.97□□□□□ -1.77
GFRA1P56159 AC092423.1-201ENST00000430165 186 ntBASIC3.97□□□□□ -1.77
GFRA1P56159 AL162384.1-201ENST00000437881 499 ntTSL 2 BASIC3.97□□□□□ -1.77
GFRA1P56159 AL731563.1-201ENST00000442202 214 ntBASIC3.97□□□□□ -1.77
GFRA1P56159 ENSA-210ENST00000503241 574 ntTSL 3 BASIC3.97□□□□□ -1.77
GFRA1P56159 LINC02110-201ENST00000503870 546 ntTSL 3 BASIC3.97□□□□□ -1.77
GFRA1P56159 AC016598.2-201ENST00000514942 525 ntTSL 5 BASIC3.97□□□□□ -1.77
GFRA1P56159 AC022039.1-201ENST00000527110 488 ntTSL 2 BASIC3.97□□□□□ -1.77
GFRA1P56159 AC107016.1-201ENST00000550463 337 ntBASIC3.97□□□□□ -1.77
GFRA1P56159 AC006600.1-201ENST00000572529 153 ntBASIC3.97□□□□□ -1.77
GFRA1P56159 AC009318.2-201ENST00000610917 651 ntBASIC3.97□□□□□ -1.77
GFRA1P56159 MIR1244-1-201ENST00000612829 85 ntBASIC3.97□□□□□ -1.77
GFRA1P56159 AL110115.1-201ENST00000614396 364 ntBASIC3.97□□□□□ -1.77
GFRA1P56159 OR4C16-201ENST00000623907 933 ntAPPRIS P1 BASIC3.97□□□□□ -1.77
GFRA1P56159 MIR1244-3-201ENST00000635744 85 ntBASIC3.97□□□□□ -1.77
GFRA1P56159 MIR1244-2-201ENST00000636449 85 ntBASIC3.97□□□□□ -1.77
GFRA1P56159 MIR1244-4-202ENST00000636813 85 ntBASIC3.97□□□□□ -1.77
GFRA1P56159 U2.21-201ENST00000637295 81 ntBASIC3.97□□□□□ -1.77
GFRA1P56159 C4orf17-204ENST00000514652 2542 ntAPPRIS ALT2 TSL 5 BASIC3.97□□□□□ -1.77
GFRA1P56159 AL133412.1-201ENST00000380194 2992 ntBASIC3.97□□□□□ -1.77
GFRA1P56159 SCN1A-210ENST00000635776 10107 ntTSL 5 BASIC3.97□□□□□ -1.77
GFRA1P56159 CUL3-203ENST00000409096 2701 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
GFRA1P56159 AC066616.2-201ENST00000559334 1481 ntBASIC3.97□□□□□ -1.77
GFRA1P56159 CENPE-208ENST00000611174 8260 ntTSL 5 BASIC3.97□□□□□ -1.77
GFRA1P56159 NFIB-203ENST00000380934 2142 ntTSL 2 BASIC3.97□□□□□ -1.77
GFRA1P56159 EIF4E3-202ENST00000389826 6083 ntTSL 5 BASIC3.96□□□□□ -1.77
GFRA1P56159 NRIP1-201ENST00000318948 7556 ntAPPRIS P1 TSL 2 BASIC3.96□□□□□ -1.77
GFRA1P56159 TLR3-201ENST00000296795 6015 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.77
GFRA1P56159 CASK-207ENST00000421587 8204 ntAPPRIS ALT2 TSL 1 (best) BASIC3.96□□□□□ -1.78
GFRA1P56159 ADCY10-202ENST00000367851 5051 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
GFRA1P56159 RNU6-778P-201ENST00000363269 103 ntBASIC3.96□□□□□ -1.78
GFRA1P56159 RNU6-238P-201ENST00000363313 106 ntBASIC3.96□□□□□ -1.78
GFRA1P56159 U3.6-201ENST00000363622 211 ntBASIC3.96□□□□□ -1.78
GFRA1P56159 AKAP14-204ENST00000371431 977 ntAPPRIS P3 TSL 1 (best) BASIC3.96□□□□□ -1.78
GFRA1P56159 Y_RNA.526-201ENST00000384572 110 ntBASIC3.96□□□□□ -1.78
GFRA1P56159 AC010745.2-201ENST00000420404 839 ntTSL 3 BASIC3.96□□□□□ -1.78
GFRA1P56159 AC012506.4-201ENST00000421563 541 ntTSL 4 BASIC3.96□□□□□ -1.78
GFRA1P56159 AC093083.1-201ENST00000438633 347 ntTSL 3 BASIC3.96□□□□□ -1.78
GFRA1P56159 RPS3AP46-201ENST00000448352 682 ntBASIC3.96□□□□□ -1.78
GFRA1P56159 LINC01768-201ENST00000453347 476 ntTSL 3 BASIC3.96□□□□□ -1.78
GFRA1P56159 DCLRE1CP1-201ENST00000454630 470 ntBASIC3.96□□□□□ -1.78
GFRA1P56159 SNRPGP5-201ENST00000456003 220 ntBASIC3.96□□□□□ -1.78
GFRA1P56159 RNU7-169P-201ENST00000459456 61 ntBASIC3.96□□□□□ -1.78
GFRA1P56159 RN7SL385P-201ENST00000468873 276 ntBASIC3.96□□□□□ -1.78
GFRA1P56159 RPL23AP49-201ENST00000492925 468 ntBASIC3.96□□□□□ -1.78
GFRA1P56159 RN7SL812P-201ENST00000493791 279 ntBASIC3.96□□□□□ -1.78
GFRA1P56159 AC083829.1-201ENST00000503756 657 ntBASIC3.96□□□□□ -1.78
GFRA1P56159 MRPS35P2-201ENST00000508242 191 ntBASIC3.96□□□□□ -1.78
GFRA1P56159 RN7SKP122-201ENST00000515923 296 ntBASIC3.96□□□□□ -1.78
GFRA1P56159 CACNA1C-IT2-201ENST00000541871 589 ntTSL 2 BASIC3.96□□□□□ -1.78
GFRA1P56159 UBE2Q2P8-201ENST00000560644 102 ntBASIC3.96□□□□□ -1.78
GFRA1P56159 AC091043.1-201ENST00000579830 453 ntTSL 3 BASIC3.96□□□□□ -1.78
GFRA1P56159 AC023575.1-201ENST00000580510 358 ntBASIC3.96□□□□□ -1.78
GFRA1P56159 MIR5188-201ENST00000583467 113 ntBASIC3.96□□□□□ -1.78
GFRA1P56159 VN1R91P-201ENST00000594377 169 ntBASIC3.96□□□□□ -1.78
GFRA1P56159 VN1R107P-201ENST00000601784 209 ntBASIC3.96□□□□□ -1.78
GFRA1P56159 AC010201.1-201ENST00000605051 540 ntBASIC3.96□□□□□ -1.78
GFRA1P56159 LINC00993-204ENST00000606476 500 ntTSL 5 BASIC3.96□□□□□ -1.78
GFRA1P56159 AC091979.2-201ENST00000607514 214 ntBASIC3.96□□□□□ -1.78
GFRA1P56159 AC114781.5-201ENST00000615297 108 ntBASIC3.96□□□□□ -1.78
GFRA1P56159 AC090617.7-201ENST00000623952 126 ntBASIC3.96□□□□□ -1.78
GFRA1P56159 AC140479.6-201ENST00000633535 357 ntBASIC3.96□□□□□ -1.78
GFRA1P56159 MTX3-203ENST00000512560 4799 ntTSL 2 BASIC3.96□□□□□ -1.78
GFRA1P56159 DLG1-217ENST00000452595 3053 ntTSL 2 BASIC3.96□□□□□ -1.78
GFRA1P56159 CSMD3-203ENST00000343508 13018 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
GFRA1P56159 PATJ-202ENST00000316485 3657 ntTSL 5 BASIC3.96□□□□□ -1.78
GFRA1P56159 GABRA1-220ENST00000638159 4088 ntTSL 5 BASIC3.96□□□□□ -1.78
GFRA1P56159 FOXP2-207ENST00000393494 2664 ntAPPRIS P2 TSL 5 BASIC3.96□□□□□ -1.78
GFRA1P56159 AL672167.1-203ENST00000641299 2975 ntBASIC3.96□□□□□ -1.78
GFRA1P56159 ZNF682-207ENST00000595736 1710 ntTSL 2 BASIC3.95□□□□□ -1.78
GFRA1P56159 RPS6KA5-207ENST00000614987 26795 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
GFRA1P56159 CSPP1-203ENST00000519668 3715 ntAPPRIS ALT2 TSL 1 (best) BASIC3.95□□□□□ -1.78
GFRA1P56159 ZMYND11-217ENST00000627286 3914 ntTSL 5 BASIC3.95□□□□□ -1.78
GFRA1P56159 AC010733.2-201ENST00000589496 5702 ntBASIC3.95□□□□□ -1.78
GFRA1P56159 INPP4B-220ENST00000513000 8831 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
GFRA1P56159 SLC30A6-205ENST00000435660 4776 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
GFRA1P56159 PUS7L-201ENST00000344862 13593 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
GFRA1P56159 DENND2C-203ENST00000393277 4730 ntTSL 5 BASIC3.95□□□□□ -1.78
GFRA1P56159 XPO4-201ENST00000255305 9921 ntAPPRIS P2 TSL 1 (best) BASIC3.95□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 143.6 ms