Protein–RNA interactions for Protein: P51956

NEK3, Serine/threonine-protein kinase Nek3, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3P51956 DEFB107A-201ENST00000335021 389 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
NEK3P51956 DEFB107B-201ENST00000355602 389 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
NEK3P51956 RNU6-434P-201ENST00000384376 107 ntBASIC3.59□□□□□ -1.83
NEK3P51956 RNU6-45P-201ENST00000384471 107 ntBASIC3.59□□□□□ -1.83
NEK3P51956 RNU6-750P-201ENST00000390946 107 ntBASIC3.59□□□□□ -1.83
NEK3P51956 AL356057.2-201ENST00000403318 432 ntBASIC3.59□□□□□ -1.83
NEK3P51956 U3.39-201ENST00000408569 239 ntBASIC3.59□□□□□ -1.83
NEK3P51956 AC239803.1-203ENST00000411978 452 ntTSL 2 BASIC3.59□□□□□ -1.83
NEK3P51956 RPL21P90-201ENST00000415692 466 ntBASIC3.59□□□□□ -1.83
NEK3P51956 MTCO1P21-201ENST00000416634 589 ntBASIC3.59□□□□□ -1.83
NEK3P51956 AL353621.1-201ENST00000418219 243 ntBASIC3.59□□□□□ -1.83
NEK3P51956 GRM7-AS1-201ENST00000420230 430 ntTSL 3 BASIC3.59□□□□□ -1.83
NEK3P51956 MTCYBP8-201ENST00000422855 651 ntBASIC3.59□□□□□ -1.83
NEK3P51956 USP9YP18-201ENST00000425912 695 ntBASIC3.59□□□□□ -1.83
NEK3P51956 AC005300.1-201ENST00000428401 373 ntBASIC3.59□□□□□ -1.83
NEK3P51956 C8orf59P1-201ENST00000429930 303 ntBASIC3.59□□□□□ -1.83
NEK3P51956 C21orf91-OT1-202ENST00000430815 717 ntTSL 5 BASIC3.59□□□□□ -1.83
NEK3P51956 AC007179.2-207ENST00000435557 556 ntTSL 4 BASIC3.59□□□□□ -1.83
NEK3P51956 AL354936.1-201ENST00000441521 649 ntTSL 5 BASIC3.59□□□□□ -1.83
NEK3P51956 AC018816.1-203ENST00000441894 338 ntTSL 3 BASIC3.59□□□□□ -1.83
NEK3P51956 AL845311.1-201ENST00000444791 891 ntTSL 3 BASIC3.59□□□□□ -1.83
NEK3P51956 LINC01162-201ENST00000447262 447 ntTSL 5 BASIC3.59□□□□□ -1.83
NEK3P51956 LINC01201-202ENST00000451431 401 ntTSL 3 BASIC3.59□□□□□ -1.83
NEK3P51956 CYCSP35-201ENST00000451978 304 ntBASIC3.59□□□□□ -1.83
NEK3P51956 AC006483.1-201ENST00000487308 313 ntBASIC3.59□□□□□ -1.83
NEK3P51956 AC091885.1-201ENST00000506658 268 ntBASIC3.59□□□□□ -1.83
NEK3P51956 RNU6-1281P-201ENST00000516223 105 ntBASIC3.59□□□□□ -1.83
NEK3P51956 AC011257.1-201ENST00000519048 281 ntTSL 3 BASIC3.59□□□□□ -1.83
NEK3P51956 IL7-206ENST00000520269 456 ntTSL 3 BASIC3.59□□□□□ -1.83
NEK3P51956 AC109635.3-201ENST00000529536 185 ntBASIC3.59□□□□□ -1.83
NEK3P51956 AC026333.2-201ENST00000542164 106 ntBASIC3.59□□□□□ -1.83
NEK3P51956 TRAV37-201ENST00000553906 342 ntBASIC3.59□□□□□ -1.83
NEK3P51956 AL160191.1-201ENST00000555480 566 ntTSL 4 BASIC3.59□□□□□ -1.83
NEK3P51956 CYCSP39-201ENST00000565821 309 ntBASIC3.59□□□□□ -1.83
NEK3P51956 AC106782.4-201ENST00000568264 210 ntBASIC3.59□□□□□ -1.83
NEK3P51956 LINC02210-208ENST00000585118 546 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
NEK3P51956 AP003465.2-201ENST00000602571 373 ntBASIC3.59□□□□□ -1.83
NEK3P51956 AC006077.1-201ENST00000604746 343 ntBASIC3.59□□□□□ -1.83
NEK3P51956 AC087045.1-201ENST00000605856 382 ntBASIC3.59□□□□□ -1.83
NEK3P51956 RMST_4.1-201ENST00000616886 107 ntBASIC3.59□□□□□ -1.83
NEK3P51956 U6.105-201ENST00000637379 88 ntBASIC3.59□□□□□ -1.83
NEK3P51956 GPRC6A-202ENST00000368549 2622 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
NEK3P51956 AC093725.1-201ENST00000508135 2672 ntTSL 5 BASIC3.59□□□□□ -1.83
NEK3P51956 EPS15-202ENST00000371730 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC3.59□□□□□ -1.83
NEK3P51956 LINC01416-201ENST00000563553 2310 ntTSL 1 (best) BASIC3.59□□□□□ -1.84
NEK3P51956 DCUN1D1-208ENST00000632685 3147 ntTSL 1 (best) BASIC3.59□□□□□ -1.84
NEK3P51956 LRRC39-201ENST00000342895 1881 ntAPPRIS P1 TSL 5 BASIC3.58□□□□□ -1.84
NEK3P51956 ADAM3A-203ENST00000461344 2157 ntBASIC3.58□□□□□ -1.84
NEK3P51956 HERC5-203ENST00000508159 2243 ntTSL 2 BASIC3.58□□□□□ -1.84
NEK3P51956 SEMA3D-201ENST00000284136 6265 ntAPPRIS P1 TSL 5 BASIC3.58□□□□□ -1.84
NEK3P51956 RNA5SP72-201ENST00000364442 117 ntBASIC3.58□□□□□ -1.84
NEK3P51956 RNU6-715P-201ENST00000365204 103 ntBASIC3.58□□□□□ -1.84
NEK3P51956 Y_RNA.399-201ENST00000383955 105 ntBASIC3.58□□□□□ -1.84
NEK3P51956 Y_RNA.402-201ENST00000383972 102 ntBASIC3.58□□□□□ -1.84
NEK3P51956 SNORA75B-201ENST00000384053 137 ntBASIC3.58□□□□□ -1.84
NEK3P51956 RNU6-393P-201ENST00000384475 107 ntBASIC3.58□□□□□ -1.84
NEK3P51956 RNU6-1127P-201ENST00000384580 107 ntBASIC3.58□□□□□ -1.84
NEK3P51956 RNU6-1179P-201ENST00000384667 107 ntBASIC3.58□□□□□ -1.84
NEK3P51956 MIR34A-201ENST00000385130 110 ntBASIC3.58□□□□□ -1.84
NEK3P51956 RNU6-193P-201ENST00000410977 107 ntBASIC3.58□□□□□ -1.84
NEK3P51956 AC023141.4-201ENST00000412031 328 ntBASIC3.58□□□□□ -1.84
NEK3P51956 AL645937.1-202ENST00000421799 937 ntBASIC3.58□□□□□ -1.84
NEK3P51956 AL033504.1-201ENST00000427015 773 ntTSL 2 BASIC3.58□□□□□ -1.84
NEK3P51956 GTF2IP20-201ENST00000431663 360 ntBASIC3.58□□□□□ -1.84
NEK3P51956 NIPA2P5-201ENST00000452282 464 ntBASIC3.58□□□□□ -1.84
NEK3P51956 AC114501.3-201ENST00000453648 164 ntTSL 5 BASIC3.58□□□□□ -1.84
NEK3P51956 AC006539.3-201ENST00000454258 129 ntBASIC3.58□□□□□ -1.84
NEK3P51956 AL160162.1-201ENST00000456715 442 ntTSL 3 BASIC3.58□□□□□ -1.84
NEK3P51956 RNU7-180P-201ENST00000459240 63 ntBASIC3.58□□□□□ -1.84
NEK3P51956 snoU13.22-201ENST00000459428 104 ntBASIC3.58□□□□□ -1.84
NEK3P51956 AC021205.2-201ENST00000480069 347 ntBASIC3.58□□□□□ -1.84
NEK3P51956 RNU4ATAC15P-201ENST00000516415 126 ntBASIC3.58□□□□□ -1.84
NEK3P51956 MIR2276-201ENST00000516886 89 ntBASIC3.58□□□□□ -1.84
NEK3P51956 MTND1P5-201ENST00000517906 940 ntBASIC3.58□□□□□ -1.84
NEK3P51956 AC100763.1-201ENST00000532735 522 ntTSL 3 BASIC3.58□□□□□ -1.84
NEK3P51956 MTCO3P23-201ENST00000561363 289 ntBASIC3.58□□□□□ -1.84
NEK3P51956 AL451007.1-201ENST00000595491 289 ntBASIC3.58□□□□□ -1.84
NEK3P51956 RPL23AP78-201ENST00000599928 470 ntBASIC3.58□□□□□ -1.84
NEK3P51956 AC103858.1-201ENST00000607019 476 ntTSL 3 BASIC3.58□□□□□ -1.84
NEK3P51956 AC109471.3-201ENST00000625219 233 ntTSL 5 BASIC3.58□□□□□ -1.84
NEK3P51956 XRCC4-203ENST00000396027 1530 ntAPPRIS ALT1 TSL 5 BASIC3.58□□□□□ -1.84
NEK3P51956 PSG8-202ENST00000401467 1686 ntTSL 5 BASIC3.58□□□□□ -1.84
NEK3P51956 MACF1-201ENST00000289893 19141 ntTSL 5 BASIC3.58□□□□□ -1.84
NEK3P51956 CDC27P3-201ENST00000635418 1910 ntBASIC3.58□□□□□ -1.84
NEK3P51956 SULT1B1-201ENST00000310613 7115 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
NEK3P51956 MACC1-205ENST00000589011 2686 ntAPPRIS P1 TSL 5 BASIC3.57□□□□□ -1.84
NEK3P51956 CNOT6L-201ENST00000504123 8843 ntAPPRIS P1 TSL 2 BASIC3.57□□□□□ -1.84
NEK3P51956 LUZP2-208ENST00000620308 4981 ntTSL 5 BASIC3.57□□□□□ -1.84
NEK3P51956 RNY4P14-201ENST00000363656 96 ntBASIC3.57□□□□□ -1.84
NEK3P51956 RNA5SP50-201ENST00000363731 107 ntBASIC3.57□□□□□ -1.84
NEK3P51956 Y_RNA.480-201ENST00000384364 102 ntBASIC3.57□□□□□ -1.84
NEK3P51956 SNORA48.8-201ENST00000391324 134 ntBASIC3.57□□□□□ -1.84
NEK3P51956 AL592114.1-201ENST00000403842 483 ntBASIC3.57□□□□□ -1.84
NEK3P51956 AL606923.1-201ENST00000406616 190 ntBASIC3.57□□□□□ -1.84
NEK3P51956 RNA5SP31-201ENST00000411144 127 ntBASIC3.57□□□□□ -1.84
NEK3P51956 AC106873.1-201ENST00000420664 459 ntTSL 3 BASIC3.57□□□□□ -1.84
NEK3P51956 U51244.1-201ENST00000423120 374 ntTSL 3 BASIC3.57□□□□□ -1.84
NEK3P51956 AL358075.3-201ENST00000426289 226 ntBASIC3.57□□□□□ -1.84
NEK3P51956 AL669831.1-202ENST00000428504 417 ntBASIC3.57□□□□□ -1.84
NEK3P51956 AL355303.1-201ENST00000428920 680 ntTSL 3 BASIC3.57□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 89.7 ms