Protein–RNA interactions for Protein: P51157

RAB28, Ras-related protein Rab-28, humanhuman

Predictions only

Length 221 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB28P51157 AP001646.1-201ENST00000527936 915 ntBASIC2.84□□□□□ -1.95
RAB28P51157 AC068587.5-201ENST00000528506 175 ntBASIC2.84□□□□□ -1.95
RAB28P51157 AC073591.1-201ENST00000552736 597 ntTSL 3 BASIC2.84□□□□□ -1.95
RAB28P51157 AC006362.1-201ENST00000567392 174 ntBASIC2.84□□□□□ -1.95
RAB28P51157 MIR4528-201ENST00000577763 90 ntBASIC2.84□□□□□ -1.95
RAB28P51157 MIR4782-201ENST00000577987 79 ntBASIC2.84□□□□□ -1.95
RAB28P51157 MIR1273C-201ENST00000578669 77 ntBASIC2.84□□□□□ -1.95
RAB28P51157 RSL24D1P11-201ENST00000591045 491 ntBASIC2.84□□□□□ -1.95
RAB28P51157 AC126118.1-201ENST00000607744 628 ntBASIC2.84□□□□□ -1.95
RAB28P51157 AC072046.2-201ENST00000618366 268 ntBASIC2.84□□□□□ -1.95
RAB28P51157 SMAD5-AS1_1.1-201ENST00000619886 266 ntBASIC2.84□□□□□ -1.95
RAB28P51157 AC024940.5-201ENST00000622889 474 ntBASIC2.84□□□□□ -1.95
RAB28P51157 AC025034.2-201ENST00000623264 286 ntBASIC2.84□□□□□ -1.95
RAB28P51157 AL157786.1-207ENST00000627771 695 ntBASIC2.84□□□□□ -1.95
RAB28P51157 AC090582.1-201ENST00000636321 199 ntBASIC2.84□□□□□ -1.95
RAB28P51157 LRRC77P-213ENST00000637727 880 ntBASIC2.84□□□□□ -1.95
RAB28P51157 AC138915.1-201ENST00000565427 1685 ntBASIC2.84□□□□□ -1.95
RAB28P51157 CHD9-218ENST00000566029 13110 ntAPPRIS P1 TSL 1 (best) BASIC2.84□□□□□ -1.96
RAB28P51157 AC103710.2-202ENST00000641454 2853 ntBASIC2.84□□□□□ -1.96
RAB28P51157 OR13G1-202ENST00000642119 2568 ntAPPRIS P1 BASIC2.84□□□□□ -1.96
RAB28P51157 FTX-214ENST00000638437 12267 ntTSL 5 BASIC2.84□□□□□ -1.96
RAB28P51157 AL589740.1-207ENST00000607823 1962 ntTSL 5 BASIC2.83□□□□□ -1.96
RAB28P51157 OR8K3-203ENST00000641662 2438 ntAPPRIS P1 BASIC2.83□□□□□ -1.96
RAB28P51157 CHD1-201ENST00000284049 6457 ntAPPRIS P1 TSL 1 (best) BASIC2.83□□□□□ -1.96
RAB28P51157 AC096644.4-201ENST00000563417 2912 ntBASIC2.83□□□□□ -1.96
RAB28P51157 ZNF479-202ENST00000331162 2072 ntAPPRIS P1 TSL 1 (best) BASIC2.83□□□□□ -1.96
RAB28P51157 ZNF85-203ENST00000345030 1689 ntAPPRIS ALT2 TSL 5 BASIC2.83□□□□□ -1.96
RAB28P51157 PLS1-201ENST00000337777 3755 ntAPPRIS P1 TSL 1 (best) BASIC2.83□□□□□ -1.96
RAB28P51157 USP45-208ENST00000500704 5826 ntAPPRIS P1 TSL 5 BASIC2.83□□□□□ -1.96
RAB28P51157 Y_RNA.33-201ENST00000362591 102 ntBASIC2.83□□□□□ -1.96
RAB28P51157 RNU6-61P-201ENST00000365528 109 ntBASIC2.83□□□□□ -1.96
RAB28P51157 SNORA75-201ENST00000384158 137 ntBASIC2.83□□□□□ -1.96
RAB28P51157 BCL2L15-203ENST00000393320 276 ntTSL 1 (best) BASIC2.83□□□□□ -1.96
RAB28P51157 AL356057.2-201ENST00000403318 432 ntBASIC2.83□□□□□ -1.96
RAB28P51157 SDCBPP3-201ENST00000419629 891 ntBASIC2.83□□□□□ -1.96
RAB28P51157 AL592466.1-201ENST00000428346 307 ntTSL 5 BASIC2.83□□□□□ -1.96
RAB28P51157 LINC01724-201ENST00000430519 621 ntTSL 3 BASIC2.83□□□□□ -1.96
RAB28P51157 AC025038.1-201ENST00000433249 336 ntTSL 3 BASIC2.83□□□□□ -1.96
RAB28P51157 DARS-AS1-205ENST00000444649 558 ntTSL 3 BASIC2.83□□□□□ -1.96
RAB28P51157 SLC16A12-AS1-202ENST00000454270 478 ntTSL 2 BASIC2.83□□□□□ -1.96
RAB28P51157 AC233279.1-201ENST00000455300 423 ntBASIC2.83□□□□□ -1.96
RAB28P51157 RN7SL75P-201ENST00000461926 281 ntBASIC2.83□□□□□ -1.96
RAB28P51157 AC023794.1-201ENST00000504210 403 ntTSL 2 BASIC2.83□□□□□ -1.96
RAB28P51157 AC097462.2-201ENST00000504623 481 ntBASIC2.83□□□□□ -1.96
RAB28P51157 RBBP4P6-201ENST00000508098 202 ntBASIC2.83□□□□□ -1.96
RAB28P51157 AC139720.2-201ENST00000514766 440 ntTSL 2 BASIC2.83□□□□□ -1.96
RAB28P51157 SCGB1D5P-201ENST00000515134 247 ntBASIC2.83□□□□□ -1.96
RAB28P51157 RNA5SP385-201ENST00000515947 110 ntBASIC2.83□□□□□ -1.96
RAB28P51157 SNORA31.26-201ENST00000517250 137 ntBASIC2.83□□□□□ -1.96
RAB28P51157 AF117829.1-204ENST00000519854 284 ntTSL 3 BASIC2.83□□□□□ -1.96
RAB28P51157 MTCYBP20-201ENST00000524239 1129 ntBASIC2.83□□□□□ -1.96
RAB28P51157 AP000790.2-201ENST00000534388 522 ntTSL 3 BASIC2.83□□□□□ -1.96
RAB28P51157 AC006199.1-201ENST00000548728 219 ntBASIC2.83□□□□□ -1.96
RAB28P51157 EIF4BP1-201ENST00000554881 351 ntBASIC2.83□□□□□ -1.96
RAB28P51157 AL352955.1-201ENST00000555490 332 ntTSL 3 BASIC2.83□□□□□ -1.96
RAB28P51157 MIR4506-201ENST00000584693 77 ntBASIC2.83□□□□□ -1.96
RAB28P51157 AC005261.5-201ENST00000596280 355 ntBASIC2.83□□□□□ -1.96
RAB28P51157 RN7SKP299-201ENST00000606679 301 ntBASIC2.83□□□□□ -1.96
RAB28P51157 AC109347.2-201ENST00000610220 349 ntBASIC2.83□□□□□ -1.96
RAB28P51157 DLEU2_1.1-201ENST00000612089 120 ntBASIC2.83□□□□□ -1.96
RAB28P51157 DLEU2_1.2-201ENST00000614667 120 ntBASIC2.83□□□□□ -1.96
RAB28P51157 AC093648.1-201ENST00000623546 606 ntBASIC2.83□□□□□ -1.96
RAB28P51157 AL137790.1-201ENST00000634283 177 ntBASIC2.83□□□□□ -1.96
RAB28P51157 WDR3-201ENST00000349139 9974 ntAPPRIS P1 TSL 1 (best) BASIC2.83□□□□□ -1.96
RAB28P51157 GCNT4-201ENST00000322348 5554 ntAPPRIS P1 BASIC2.82□□□□□ -1.96
RAB28P51157 NOX4-202ENST00000343727 3347 ntTSL 2 BASIC2.82□□□□□ -1.96
RAB28P51157 CREBRF-201ENST00000296953 7778 ntAPPRIS P1 TSL 1 (best) BASIC2.82□□□□□ -1.96
RAB28P51157 SHOC2-201ENST00000265277 3691 ntTSL 2 BASIC2.82□□□□□ -1.96
RAB28P51157 RNU6-282P-201ENST00000365357 103 ntBASIC2.82□□□□□ -1.96
RAB28P51157 Y_RNA.367-201ENST00000365544 101 ntBASIC2.82□□□□□ -1.96
RAB28P51157 PTPRC-202ENST00000367364 1017 ntTSL 1 (best) BASIC2.82□□□□□ -1.96
RAB28P51157 RN7SKP58-201ENST00000411010 305 ntBASIC2.82□□□□□ -1.96
RAB28P51157 EEF1A1P41-201ENST00000414667 207 ntBASIC2.82□□□□□ -1.96
RAB28P51157 PIGFP2-201ENST00000421400 651 ntBASIC2.82□□□□□ -1.96
RAB28P51157 AC133104.1-201ENST00000429100 218 ntBASIC2.82□□□□□ -1.96
RAB28P51157 PCDH9-AS1-201ENST00000430861 532 ntTSL 2 BASIC2.82□□□□□ -1.96
RAB28P51157 PCYT1B-AS1-201ENST00000432626 275 ntTSL 2 BASIC2.82□□□□□ -1.96
RAB28P51157 OXR1-205ENST00000442977 2956 ntTSL 2 BASIC2.82□□□□□ -1.96
RAB28P51157 UBBP3-201ENST00000445497 241 ntBASIC2.82□□□□□ -1.96
RAB28P51157 MTATP6P26-201ENST00000445926 662 ntBASIC2.82□□□□□ -1.96
RAB28P51157 AC079781.2-201ENST00000446424 169 ntBASIC2.82□□□□□ -1.96
RAB28P51157 AP000477.2-201ENST00000447405 778 ntTSL 3 BASIC2.82□□□□□ -1.96
RAB28P51157 DPPA3P1-201ENST00000448050 469 ntBASIC2.82□□□□□ -1.96
RAB28P51157 AC079448.1-201ENST00000449377 373 ntBASIC2.82□□□□□ -1.96
RAB28P51157 AP001486.1-201ENST00000463339 476 ntBASIC2.82□□□□□ -1.96
RAB28P51157 TRBV1-201ENST00000476502 284 ntBASIC2.82□□□□□ -1.96
RAB28P51157 LAMTOR3P2-201ENST00000504479 232 ntBASIC2.82□□□□□ -1.96
RAB28P51157 LINC02377-202ENST00000505436 523 ntTSL 5 BASIC2.82□□□□□ -1.96
RAB28P51157 AC110296.1-201ENST00000515680 341 ntTSL 3 BASIC2.82□□□□□ -1.96
RAB28P51157 SCARNA17.1-201ENST00000516211 143 ntBASIC2.82□□□□□ -1.96
RAB28P51157 SCARNA17.2-201ENST00000516334 143 ntBASIC2.82□□□□□ -1.96
RAB28P51157 AL121821.2-201ENST00000556081 394 ntBASIC2.82□□□□□ -1.96
RAB28P51157 AC018904.1-201ENST00000560594 542 ntTSL 3 BASIC2.82□□□□□ -1.96
RAB28P51157 AC007151.1-201ENST00000572774 483 ntBASIC2.82□□□□□ -1.96
RAB28P51157 AC131274.4-201ENST00000577879 398 ntTSL 3 BASIC2.82□□□□□ -1.96
RAB28P51157 AP005136.1-201ENST00000579765 429 ntBASIC2.82□□□□□ -1.96
RAB28P51157 AC007948.1-201ENST00000581632 242 ntTSL 5 BASIC2.82□□□□□ -1.96
RAB28P51157 PIGPP4-201ENST00000584447 307 ntBASIC2.82□□□□□ -1.96
RAB28P51157 AL137843.1-201ENST00000605078 385 ntBASIC2.82□□□□□ -1.96
RAB28P51157 MIR7106-201ENST00000612419 65 ntBASIC2.82□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 10.9 ms