Protein–RNA interactions for Protein: O60391

GRIN3B, Glutamate receptor ionotropic, NMDA 3B, humanhuman

Predictions only

Length 1,043 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GRIN3BO60391 AL365361.1-201ENST00000566942 3481 ntBASIC4.78□□□□□ -1.64
GRIN3BO60391 FAM71D-211ENST00000612183 1790 ntAPPRIS P1 TSL 2 BASIC4.78□□□□□ -1.64
GRIN3BO60391 RC3H1-201ENST00000258349 10988 ntAPPRIS P3 TSL 1 (best) BASIC4.78□□□□□ -1.64
GRIN3BO60391 BMPR2-201ENST00000374574 9683 ntTSL 2 BASIC4.78□□□□□ -1.64
GRIN3BO60391 MTND5P30-201ENST00000452896 1731 ntBASIC4.78□□□□□ -1.64
GRIN3BO60391 PTPN22-201ENST00000359785 3654 ntAPPRIS P2 TSL 1 (best) BASIC4.78□□□□□ -1.64
GRIN3BO60391 FGF7-202ENST00000560270 1688 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
GRIN3BO60391 AL157777.2-201ENST00000258070 137 ntBASIC4.78□□□□□ -1.64
GRIN3BO60391 RNA5SP52-201ENST00000362448 134 ntBASIC4.78□□□□□ -1.64
GRIN3BO60391 RNU6-288P-201ENST00000363690 104 ntBASIC4.78□□□□□ -1.64
GRIN3BO60391 LZIC-201ENST00000377213 945 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
GRIN3BO60391 RNU6-1222P-201ENST00000384615 107 ntBASIC4.78□□□□□ -1.64
GRIN3BO60391 RNU6-95P-201ENST00000384697 107 ntBASIC4.78□□□□□ -1.64
GRIN3BO60391 RPS4XP7-201ENST00000406274 780 ntBASIC4.78□□□□□ -1.64
GRIN3BO60391 RNU6-985P-201ENST00000410182 104 ntBASIC4.78□□□□□ -1.64
GRIN3BO60391 RNU6-1050P-201ENST00000410388 107 ntBASIC4.78□□□□□ -1.64
GRIN3BO60391 AC138024.1-201ENST00000420867 699 ntTSL 3 BASIC4.78□□□□□ -1.64
GRIN3BO60391 AC026355.1-201ENST00000423466 587 ntTSL 5 BASIC4.78□□□□□ -1.64
GRIN3BO60391 AF274573.2-201ENST00000437772 520 ntTSL 5 BASIC4.78□□□□□ -1.64
GRIN3BO60391 HIGD1AP11-201ENST00000438361 280 ntBASIC4.78□□□□□ -1.64
GRIN3BO60391 HMGB1P30-201ENST00000492455 606 ntBASIC4.78□□□□□ -1.64
GRIN3BO60391 AC108022.1-201ENST00000493466 478 ntBASIC4.78□□□□□ -1.64
GRIN3BO60391 AC108067.1-201ENST00000514304 215 ntTSL 5 BASIC4.78□□□□□ -1.64
GRIN3BO60391 RNA5SP164-201ENST00000516533 110 ntBASIC4.78□□□□□ -1.64
GRIN3BO60391 AC023866.1-201ENST00000518064 579 ntTSL 4 BASIC4.78□□□□□ -1.64
GRIN3BO60391 AP002884.4-201ENST00000527589 594 ntTSL 3 BASIC4.78□□□□□ -1.64
GRIN3BO60391 AC069240.1-201ENST00000548774 375 ntBASIC4.78□□□□□ -1.64
GRIN3BO60391 AC026116.1-201ENST00000551729 474 ntTSL 3 BASIC4.78□□□□□ -1.64
GRIN3BO60391 AC092138.1-201ENST00000568659 472 ntTSL 2 BASIC4.78□□□□□ -1.64
GRIN3BO60391 AF001550.1-201ENST00000572747 573 ntTSL 4 BASIC4.78□□□□□ -1.64
GRIN3BO60391 RPL23AP87-202ENST00000573039 466 ntBASIC4.78□□□□□ -1.64
GRIN3BO60391 MIR4680-201ENST00000580906 66 ntBASIC4.78□□□□□ -1.64
GRIN3BO60391 MIR4325-201ENST00000583049 90 ntBASIC4.78□□□□□ -1.64
GRIN3BO60391 LINC01897-203ENST00000591503 369 ntTSL 2 BASIC4.78□□□□□ -1.64
GRIN3BO60391 AC009229.3-201ENST00000608056 282 ntBASIC4.78□□□□□ -1.64
GRIN3BO60391 AC105265.4-201ENST00000618391 306 ntTSL 5 BASIC4.78□□□□□ -1.64
GRIN3BO60391 AC244517.5-202ENST00000623741 500 ntTSL 3 BASIC4.78□□□□□ -1.64
GRIN3BO60391 PDE10A-201ENST00000366882 8233 ntAPPRIS P3 TSL 5 BASIC4.78□□□□□ -1.64
GRIN3BO60391 CENPE-202ENST00000380026 8241 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
GRIN3BO60391 PNISR-201ENST00000369239 5112 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
GRIN3BO60391 PREPL-206ENST00000409936 5212 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
GRIN3BO60391 UEVLD-208ENST00000535484 1963 ntTSL 2 BASIC4.78□□□□□ -1.64
GRIN3BO60391 NCOA1-201ENST00000288599 6952 ntAPPRIS ALT2 TSL 1 (best) BASIC4.78□□□□□ -1.64
GRIN3BO60391 CNTN5-207ENST00000527185 4303 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
GRIN3BO60391 FAM204A-203ENST00000369183 13889 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
GRIN3BO60391 HIF1A-201ENST00000323441 3555 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
GRIN3BO60391 SMC2-AS1-201ENST00000603487 7020 ntTSL 2 BASIC4.78□□□□□ -1.65
GRIN3BO60391 CDH9-201ENST00000231021 3079 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
GRIN3BO60391 PCLO-206ENST00000437081 3786 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
GRIN3BO60391 SNORD62.1-201ENST00000362541 86 ntBASIC4.77□□□□□ -1.65
GRIN3BO60391 Y_RNA.463-201ENST00000384271 102 ntBASIC4.77□□□□□ -1.65
GRIN3BO60391 RNU1-44P-201ENST00000384453 163 ntBASIC4.77□□□□□ -1.65
GRIN3BO60391 Y_RNA.594-201ENST00000410373 140 ntBASIC4.77□□□□□ -1.65
GRIN3BO60391 AL645568.3-201ENST00000433683 316 ntBASIC4.77□□□□□ -1.65
GRIN3BO60391 AC078993.1-203ENST00000435789 1037 ntTSL 5 BASIC4.77□□□□□ -1.65
GRIN3BO60391 SNORD5.1-201ENST00000458800 75 ntBASIC4.77□□□□□ -1.65
GRIN3BO60391 TIPARP-AS1-202ENST00000478005 554 ntTSL 4 BASIC4.77□□□□□ -1.65
GRIN3BO60391 AC108145.1-201ENST00000503770 153 ntBASIC4.77□□□□□ -1.65
GRIN3BO60391 AC096745.1-201ENST00000509945 370 ntBASIC4.77□□□□□ -1.65
GRIN3BO60391 MTCO2P24-201ENST00000515611 426 ntBASIC4.77□□□□□ -1.65
GRIN3BO60391 SNORA25.10-201ENST00000515926 124 ntBASIC4.77□□□□□ -1.65
GRIN3BO60391 RNU6-927P-201ENST00000516199 100 ntBASIC4.77□□□□□ -1.65
GRIN3BO60391 Y_RNA.670-201ENST00000516255 105 ntBASIC4.77□□□□□ -1.65
GRIN3BO60391 RNU7-143P-201ENST00000516781 65 ntBASIC4.77□□□□□ -1.65
GRIN3BO60391 RNU4ATAC17P-201ENST00000517272 120 ntBASIC4.77□□□□□ -1.65
GRIN3BO60391 DIAPH2-AS1-203ENST00000542084 450 ntTSL 5 BASIC4.77□□□□□ -1.65
GRIN3BO60391 AL355922.1-201ENST00000555624 337 ntTSL 3 BASIC4.77□□□□□ -1.65
GRIN3BO60391 AC005951.2-201ENST00000576282 495 ntBASIC4.77□□□□□ -1.65
GRIN3BO60391 MIR5692A1-201ENST00000580523 69 ntBASIC4.77□□□□□ -1.65
GRIN3BO60391 AC003973.1-201ENST00000600071 546 ntTSL 4 BASIC4.77□□□□□ -1.65
GRIN3BO60391 AC011890.2-201ENST00000613393 294 ntBASIC4.77□□□□□ -1.65
GRIN3BO60391 ZNF678-202ENST00000397097 8212 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
GRIN3BO60391 MECOM-219ENST00000628990 4835 ntAPPRIS P3 TSL 1 (best) BASIC4.77□□□□□ -1.65
GRIN3BO60391 ZMYND11-217ENST00000627286 3914 ntTSL 5 BASIC4.77□□□□□ -1.65
GRIN3BO60391 C2CD6-204ENST00000450242 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC4.77□□□□□ -1.65
GRIN3BO60391 PRUNE2-208ENST00000443509 12356 ntAPPRIS ALT2 TSL 5 BASIC4.77□□□□□ -1.65
GRIN3BO60391 STON1-GTF2A1L-201ENST00000394751 3534 ntTSL 2 BASIC4.77□□□□□ -1.65
GRIN3BO60391 ZNF208-207ENST00000609966 3653 ntTSL 5 BASIC4.77□□□□□ -1.65
GRIN3BO60391 LRP6-201ENST00000261349 10020 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
GRIN3BO60391 IFI44L-201ENST00000370751 5874 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
GRIN3BO60391 ZC3H7A-202ENST00000396516 3845 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
GRIN3BO60391 SLC16A10-201ENST00000368850 10051 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
GRIN3BO60391 MIPOL1-206ENST00000545536 2073 ntTSL 5 BASIC4.76□□□□□ -1.65
GRIN3BO60391 SAMSN1-201ENST00000285670 2185 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
GRIN3BO60391 RNA5SP399-201ENST00000364003 117 ntBASIC4.76□□□□□ -1.65
GRIN3BO60391 RNU6-266P-201ENST00000364225 107 ntBASIC4.76□□□□□ -1.65
GRIN3BO60391 SNORA63.7-201ENST00000365579 123 ntBASIC4.76□□□□□ -1.65
GRIN3BO60391 Y_RNA.534-201ENST00000384599 112 ntBASIC4.76□□□□□ -1.65
GRIN3BO60391 RNU6-293P-201ENST00000411259 106 ntBASIC4.76□□□□□ -1.65
GRIN3BO60391 AL691426.1-201ENST00000416507 509 ntTSL 2 BASIC4.76□□□□□ -1.65
GRIN3BO60391 BX842559.1-201ENST00000419615 532 ntBASIC4.76□□□□□ -1.65
GRIN3BO60391 COTL1P1-201ENST00000422309 375 ntBASIC4.76□□□□□ -1.65
GRIN3BO60391 UBE2V1P4-201ENST00000425374 344 ntBASIC4.76□□□□□ -1.65
GRIN3BO60391 CYCSP4-201ENST00000429682 331 ntBASIC4.76□□□□□ -1.65
GRIN3BO60391 AC091153.2-202ENST00000441700 384 ntTSL 3 BASIC4.76□□□□□ -1.65
GRIN3BO60391 AL392086.1-201ENST00000457632 299 ntTSL 3 BASIC4.76□□□□□ -1.65
GRIN3BO60391 RNU7-138P-201ENST00000459479 64 ntBASIC4.76□□□□□ -1.65
GRIN3BO60391 AC008155.2-201ENST00000464337 397 ntBASIC4.76□□□□□ -1.65
GRIN3BO60391 RPL5P30-201ENST00000465511 891 ntBASIC4.76□□□□□ -1.65
GRIN3BO60391 AC026780.2-201ENST00000503489 730 ntTSL 5 BASIC4.76□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 101 ms