Protein–RNA interactions for Protein: O43347

MSI1, RNA-binding protein Musashi homolog 1, humanhuman

Known RBP Predictions only

Length 362 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSI1O43347 AC018638.8-201ENST00000588755 281 ntBASIC3.39□□□□□ -1.87
MSI1O43347 AC174048.1-201ENST00000603389 144 ntBASIC3.39□□□□□ -1.87
MSI1O43347 RNU6-89P-201ENST00000606519 100 ntBASIC3.39□□□□□ -1.87
MSI1O43347 AC009994.1-201ENST00000606889 253 ntBASIC3.39□□□□□ -1.87
MSI1O43347 uc_338.11-201ENST00000619132 160 ntBASIC3.39□□□□□ -1.87
MSI1O43347 C2orf27A-204ENST00000623058 969 ntBASIC3.39□□□□□ -1.87
MSI1O43347 AC090617.10-201ENST00000624308 134 ntBASIC3.39□□□□□ -1.87
MSI1O43347 RMDN2-AS1-204ENST00000626669 448 ntTSL 5 BASIC3.39□□□□□ -1.87
MSI1O43347 AC100810.6-201ENST00000638068 285 ntBASIC3.39□□□□□ -1.87
MSI1O43347 TPTE2P4-201ENST00000258589 1605 ntBASIC3.39□□□□□ -1.87
MSI1O43347 ZNF479-201ENST00000319636 1811 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
MSI1O43347 VNN1-201ENST00000367928 3106 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
MSI1O43347 OXR1-207ENST00000497705 2007 ntTSL 2 BASIC3.38□□□□□ -1.87
MSI1O43347 CLHC1-201ENST00000401408 2248 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
MSI1O43347 LUM-201ENST00000266718 3008 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
MSI1O43347 RNU4-46P-201ENST00000410818 138 ntBASIC3.38□□□□□ -1.87
MSI1O43347 LINC01853-201ENST00000417715 444 ntTSL 3 BASIC3.38□□□□□ -1.87
MSI1O43347 AL139254.1-201ENST00000421114 376 ntTSL 3 BASIC3.38□□□□□ -1.87
MSI1O43347 NDUFB4P7-201ENST00000423198 363 ntBASIC3.38□□□□□ -1.87
MSI1O43347 RPL27AP8-201ENST00000424277 446 ntBASIC3.38□□□□□ -1.87
MSI1O43347 LINC01797-202ENST00000433432 765 ntTSL 3 BASIC3.38□□□□□ -1.87
MSI1O43347 AL080284.1-201ENST00000434493 442 ntTSL 2 BASIC3.38□□□□□ -1.87
MSI1O43347 AC098614.3-201ENST00000438957 440 ntBASIC3.38□□□□□ -1.87
MSI1O43347 SNRPEP8-201ENST00000442866 260 ntBASIC3.38□□□□□ -1.87
MSI1O43347 TRAPPC2P3-201ENST00000443200 321 ntBASIC3.38□□□□□ -1.87
MSI1O43347 SNRPFP3-201ENST00000457792 225 ntBASIC3.38□□□□□ -1.87
MSI1O43347 RPL21P8-201ENST00000465083 535 ntBASIC3.38□□□□□ -1.87
MSI1O43347 TAF8-207ENST00000482432 556 ntTSL 2 BASIC3.38□□□□□ -1.87
MSI1O43347 LINC00971-201ENST00000482721 535 ntTSL 2 BASIC3.38□□□□□ -1.87
MSI1O43347 AC092185.1-201ENST00000491371 97 ntBASIC3.38□□□□□ -1.87
MSI1O43347 AC093534.2-201ENST00000511418 420 ntTSL 3 BASIC3.38□□□□□ -1.87
MSI1O43347 AC025475.1-201ENST00000512939 487 ntTSL 3 BASIC3.38□□□□□ -1.87
MSI1O43347 RNU6-677P-201ENST00000516914 101 ntBASIC3.38□□□□□ -1.87
MSI1O43347 AC136777.1-201ENST00000517765 369 ntTSL 4 BASIC3.38□□□□□ -1.87
MSI1O43347 AC021698.1-201ENST00000524858 716 ntTSL 3 BASIC3.38□□□□□ -1.87
MSI1O43347 RANP3-201ENST00000530970 276 ntBASIC3.38□□□□□ -1.87
MSI1O43347 AC023050.3-201ENST00000541142 333 ntBASIC3.38□□□□□ -1.87
MSI1O43347 AC004024.1-201ENST00000549244 247 ntBASIC3.38□□□□□ -1.87
MSI1O43347 IGKV1OR2-6-201ENST00000603485 277 ntBASIC3.38□□□□□ -1.87
MSI1O43347 AC106900.2-201ENST00000604994 317 ntBASIC3.38□□□□□ -1.87
MSI1O43347 AL158032.1-201ENST00000605401 106 ntBASIC3.38□□□□□ -1.87
MSI1O43347 AL357078.3-201ENST00000607528 618 ntBASIC3.38□□□□□ -1.87
MSI1O43347 AL390240.1-201ENST00000612950 384 ntBASIC3.38□□□□□ -1.87
MSI1O43347 AL157817.1-201ENST00000614264 790 ntBASIC3.38□□□□□ -1.87
MSI1O43347 uc_338.34-201ENST00000617467 174 ntBASIC3.38□□□□□ -1.87
MSI1O43347 PCNP-208ENST00000627393 136 ntTSL 2 BASIC3.38□□□□□ -1.87
MSI1O43347 U6.98-201ENST00000637157 84 ntBASIC3.38□□□□□ -1.87
MSI1O43347 SENP7-204ENST00000394085 1483 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
MSI1O43347 PWAR6-201ENST00000552334 4618 ntBASIC3.38□□□□□ -1.87
MSI1O43347 CEP85L-202ENST00000368488 7118 ntTSL 5 BASIC3.38□□□□□ -1.87
MSI1O43347 ATP2C1-202ENST00000359644 3401 ntAPPRIS P3 TSL 1 (best) BASIC3.37□□□□□ -1.87
MSI1O43347 VPS13C-203ENST00000395896 14579 ntAPPRIS ALT2 TSL 1 (best) BASIC3.37□□□□□ -1.87
MSI1O43347 ANKRD26P2-201ENST00000445530 1710 ntBASIC3.37□□□□□ -1.87
MSI1O43347 RNU1-75P-201ENST00000347264 129 ntBASIC3.37□□□□□ -1.87
MSI1O43347 RNU6-522P-201ENST00000364497 107 ntBASIC3.37□□□□□ -1.87
MSI1O43347 RNU4-66P-201ENST00000365199 138 ntBASIC3.37□□□□□ -1.87
MSI1O43347 RNU6-116P-201ENST00000384042 109 ntBASIC3.37□□□□□ -1.87
MSI1O43347 U3.19-201ENST00000390893 196 ntBASIC3.37□□□□□ -1.87
MSI1O43347 CD3D-202ENST00000392884 476 ntTSL 2 BASIC3.37□□□□□ -1.87
MSI1O43347 CISD1P1-201ENST00000393907 327 ntBASIC3.37□□□□□ -1.87
MSI1O43347 RNU6ATAC16P-201ENST00000408591 138 ntBASIC3.37□□□□□ -1.87
MSI1O43347 Y_RNA.615-201ENST00000410769 117 ntBASIC3.37□□□□□ -1.87
MSI1O43347 Z85995.1-201ENST00000415547 335 ntBASIC3.37□□□□□ -1.87
MSI1O43347 AC005482.1-201ENST00000420758 575 ntTSL 4 BASIC3.37□□□□□ -1.87
MSI1O43347 ERLEC1P1-201ENST00000433806 578 ntBASIC3.37□□□□□ -1.87
MSI1O43347 AL591212.2-201ENST00000433923 257 ntBASIC3.37□□□□□ -1.87
MSI1O43347 AL360169.1-201ENST00000435116 143 ntTSL 5 BASIC3.37□□□□□ -1.87
MSI1O43347 CBWD4P-201ENST00000445695 655 ntBASIC3.37□□□□□ -1.87
MSI1O43347 AC068580.2-201ENST00000449749 338 ntTSL 5 BASIC3.37□□□□□ -1.87
MSI1O43347 MCHR2-AS1-203ENST00000451220 429 ntTSL 3 BASIC3.37□□□□□ -1.87
MSI1O43347 LINC01038-201ENST00000457858 428 ntTSL 3 BASIC3.37□□□□□ -1.87
MSI1O43347 MIR1302-2HG-201ENST00000469289 535 ntTSL 5 BASIC3.37□□□□□ -1.87
MSI1O43347 RN7SL807P-201ENST00000470923 297 ntBASIC3.37□□□□□ -1.87
MSI1O43347 RPL7P5-201ENST00000471472 736 ntBASIC3.37□□□□□ -1.87
MSI1O43347 RPL23AP11-201ENST00000475260 469 ntBASIC3.37□□□□□ -1.87
MSI1O43347 AC021205.2-201ENST00000480069 347 ntBASIC3.37□□□□□ -1.87
MSI1O43347 RPL21P99-201ENST00000480369 423 ntBASIC3.37□□□□□ -1.87
MSI1O43347 AC110794.1-201ENST00000505816 425 ntBASIC3.37□□□□□ -1.87
MSI1O43347 AL359273.1-203ENST00000506295 602 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
MSI1O43347 AL359273.1-201ENST00000510918 627 ntBASIC3.37□□□□□ -1.87
MSI1O43347 AC010486.1-201ENST00000511793 424 ntBASIC3.37□□□□□ -1.87
MSI1O43347 RNU6-875P-201ENST00000516488 106 ntBASIC3.37□□□□□ -1.87
MSI1O43347 RNU6-1256P-201ENST00000516539 103 ntBASIC3.37□□□□□ -1.87
MSI1O43347 RNA5SP471-201ENST00000516971 106 ntBASIC3.37□□□□□ -1.87
MSI1O43347 AL137161.1-201ENST00000532231 390 ntBASIC3.37□□□□□ -1.87
MSI1O43347 AP003498.1-201ENST00000532530 347 ntTSL 3 BASIC3.37□□□□□ -1.87
MSI1O43347 SNHG1-210ENST00000539303 240 ntTSL 3 BASIC3.37□□□□□ -1.87
MSI1O43347 ADI1P3-201ENST00000549509 470 ntBASIC3.37□□□□□ -1.87
MSI1O43347 AF099810.1-201ENST00000554219 525 ntTSL 3 BASIC3.37□□□□□ -1.87
MSI1O43347 UBE2V2P2-201ENST00000587677 504 ntBASIC3.37□□□□□ -1.87
MSI1O43347 AC022893.3-201ENST00000607665 437 ntBASIC3.37□□□□□ -1.87
MSI1O43347 AC104260.1-201ENST00000616660 539 ntBASIC3.37□□□□□ -1.87
MSI1O43347 AL136221.1-201ENST00000621449 509 ntBASIC3.37□□□□□ -1.87
MSI1O43347 MTRNR2L10-201ENST00000545075 1530 ntAPPRIS P1 BASIC3.37□□□□□ -1.87
MSI1O43347 AC004944.1-201ENST00000517807 3059 ntBASIC3.37□□□□□ -1.87
MSI1O43347 EXOC6-203ENST00000371552 3564 ntTSL 5 BASIC3.37□□□□□ -1.87
MSI1O43347 SYNE1-201ENST00000341594 26584 ntAPPRIS ALT2 TSL 5 BASIC3.37□□□□□ -1.87
MSI1O43347 TOP2A-201ENST00000423485 5758 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
MSI1O43347 HSPA8P4-201ENST00000511877 1920 ntBASIC3.36□□□□□ -1.87
MSI1O43347 CBX3P1-201ENST00000325243 554 ntBASIC3.36□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 105.5 ms