Protein–RNA interactions for Protein: O00409

FOXN3, Forkhead box protein N3, humanhuman

Predicted RBP Predictions only

Length 490 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3O00409 MIR3609-201ENST00000582661 80 ntBASIC3.69□□□□□ -1.82
FOXN3O00409 AC005357.2-201ENST00000586473 583 ntTSL 2 BASIC3.69□□□□□ -1.82
FOXN3O00409 ZFP30-209ENST00000589018 444 ntTSL 5 BASIC3.69□□□□□ -1.82
FOXN3O00409 LINC01897-203ENST00000591503 369 ntTSL 2 BASIC3.69□□□□□ -1.82
FOXN3O00409 NRBF2P5-201ENST00000603087 788 ntBASIC3.69□□□□□ -1.82
FOXN3O00409 C8orf59P2-201ENST00000603441 271 ntBASIC3.69□□□□□ -1.82
FOXN3O00409 RMST_8.1-201ENST00000610287 165 ntBASIC3.69□□□□□ -1.82
FOXN3O00409 uc_338.34-201ENST00000617467 174 ntBASIC3.69□□□□□ -1.82
FOXN3O00409 CR392039.5-201ENST00000623201 510 ntBASIC3.69□□□□□ -1.82
FOXN3O00409 AC099654.5-201ENST00000636479 350 ntBASIC3.69□□□□□ -1.82
FOXN3O00409 AC012442.3-202ENST00000636742 206 ntBASIC3.69□□□□□ -1.82
FOXN3O00409 AC024614.3-201ENST00000637860 256 ntBASIC3.69□□□□□ -1.82
FOXN3O00409 CCSER2-201ENST00000224756 7664 ntAPPRIS P1 TSL 5 BASIC3.69□□□□□ -1.82
FOXN3O00409 CHM-205ENST00000615443 2821 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
FOXN3O00409 PKN2-AS1-202ENST00000458097 3542 ntTSL 2 BASIC3.69□□□□□ -1.82
FOXN3O00409 KNTC1-201ENST00000333479 6975 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
FOXN3O00409 PRKAA2-201ENST00000371244 9347 ntAPPRIS P2 TSL 1 (best) BASIC3.68□□□□□ -1.82
FOXN3O00409 KNTC1-205ENST00000450485 3655 ntTSL 2 BASIC3.68□□□□□ -1.82
FOXN3O00409 PSG8-202ENST00000401467 1686 ntTSL 5 BASIC3.68□□□□□ -1.82
FOXN3O00409 AL365440.2-201ENST00000419738 2597 ntTSL 2 BASIC3.68□□□□□ -1.82
FOXN3O00409 CPXCR1-202ENST00000373111 1577 ntAPPRIS P1 TSL 2 BASIC3.68□□□□□ -1.82
FOXN3O00409 OXR1-207ENST00000497705 2007 ntTSL 2 BASIC3.68□□□□□ -1.82
FOXN3O00409 MTND4P35-201ENST00000604257 1375 ntBASIC3.68□□□□□ -1.82
FOXN3O00409 ZFYVE16-202ENST00000505560 6599 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
FOXN3O00409 RNU6-451P-201ENST00000362921 107 ntBASIC3.68□□□□□ -1.82
FOXN3O00409 Y_RNA.86-201ENST00000363020 111 ntBASIC3.68□□□□□ -1.82
FOXN3O00409 Y_RNA.813-201ENST00000364639 102 ntBASIC3.68□□□□□ -1.82
FOXN3O00409 RNU6-1009P-201ENST00000390996 107 ntBASIC3.68□□□□□ -1.82
FOXN3O00409 MDM2-210ENST00000393413 657 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
FOXN3O00409 RNU6ATAC-201ENST00000408749 126 ntBASIC3.68□□□□□ -1.82
FOXN3O00409 RNU6-1077P-201ENST00000410506 102 ntBASIC3.68□□□□□ -1.82
FOXN3O00409 RNU6-1025P-201ENST00000410629 104 ntBASIC3.68□□□□□ -1.82
FOXN3O00409 RNA5SP38-201ENST00000410750 119 ntBASIC3.68□□□□□ -1.82
FOXN3O00409 RNU6-55P-201ENST00000411092 107 ntBASIC3.68□□□□□ -1.82
FOXN3O00409 RNU6-954P-201ENST00000411355 107 ntBASIC3.68□□□□□ -1.82
FOXN3O00409 RPL21P90-201ENST00000415692 466 ntBASIC3.68□□□□□ -1.82
FOXN3O00409 AC090952.1-201ENST00000424242 446 ntTSL 3 BASIC3.68□□□□□ -1.82
FOXN3O00409 AC092047.1-201ENST00000424997 240 ntBASIC3.68□□□□□ -1.82
FOXN3O00409 RBMY2UP-201ENST00000453474 324 ntBASIC3.68□□□□□ -1.82
FOXN3O00409 AL109763.1-201ENST00000455391 461 ntTSL 2 BASIC3.68□□□□□ -1.82
FOXN3O00409 PMCHL2-203ENST00000457791 237 ntBASIC3.68□□□□□ -1.82
FOXN3O00409 SCARNA18-201ENST00000459004 134 ntBASIC3.68□□□□□ -1.82
FOXN3O00409 snoU13.28-201ENST00000459235 104 ntBASIC3.68□□□□□ -1.82
FOXN3O00409 AP000852.1-201ENST00000472460 573 ntBASIC3.68□□□□□ -1.82
FOXN3O00409 AC025518.1-201ENST00000479856 347 ntBASIC3.68□□□□□ -1.82
FOXN3O00409 MTCO3P9-201ENST00000506989 781 ntBASIC3.68□□□□□ -1.82
FOXN3O00409 AC024022.1-202ENST00000508911 394 ntTSL 2 BASIC3.68□□□□□ -1.82
FOXN3O00409 RNU1-45P-201ENST00000517191 141 ntBASIC3.68□□□□□ -1.82
FOXN3O00409 MDM2-233ENST00000545204 398 ntTSL 5 BASIC3.68□□□□□ -1.82
FOXN3O00409 AC011602.1-201ENST00000546484 331 ntBASIC3.68□□□□□ -1.82
FOXN3O00409 AC034105.4-201ENST00000568304 277 ntBASIC3.68□□□□□ -1.82
FOXN3O00409 FOPNL-205ENST00000573429 646 ntTSL 3 BASIC3.68□□□□□ -1.82
FOXN3O00409 AC015917.1-201ENST00000579654 510 ntBASIC3.68□□□□□ -1.82
FOXN3O00409 RMST_3.1-201ENST00000611651 109 ntBASIC3.68□□□□□ -1.82
FOXN3O00409 AC006111.3-201ENST00000622137 383 ntBASIC3.68□□□□□ -1.82
FOXN3O00409 AL034408.1-202ENST00000636088 415 ntBASIC3.68□□□□□ -1.82
FOXN3O00409 OR4G1P-203ENST00000641984 1631 ntBASIC3.68□□□□□ -1.82
FOXN3O00409 FOXP2-224ENST00000635534 4290 ntTSL 5 BASIC3.68□□□□□ -1.82
FOXN3O00409 FBXO11-201ENST00000402508 3844 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
FOXN3O00409 FAM111A-207ENST00000531147 3996 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
FOXN3O00409 SYNE1-201ENST00000341594 26584 ntAPPRIS ALT2 TSL 5 BASIC3.67□□□□□ -1.82
FOXN3O00409 RNU6-715P-201ENST00000365204 103 ntBASIC3.67□□□□□ -1.82
FOXN3O00409 AP002088.1-201ENST00000382740 395 ntBASIC3.67□□□□□ -1.82
FOXN3O00409 MIR23B-201ENST00000384832 97 ntBASIC3.67□□□□□ -1.82
FOXN3O00409 SNORD17-201ENST00000390930 237 ntBASIC3.67□□□□□ -1.82
FOXN3O00409 RPS4XP7-201ENST00000406274 780 ntBASIC3.67□□□□□ -1.82
FOXN3O00409 Z99755.1-201ENST00000414048 380 ntBASIC3.67□□□□□ -1.82
FOXN3O00409 AL158156.1-201ENST00000422509 473 ntBASIC3.67□□□□□ -1.82
FOXN3O00409 AC090617.2-201ENST00000433167 404 ntTSL 3 BASIC3.67□□□□□ -1.82
FOXN3O00409 LINC01628-201ENST00000444266 397 ntTSL 2 BASIC3.67□□□□□ -1.82
FOXN3O00409 AC021205.2-201ENST00000480069 347 ntBASIC3.67□□□□□ -1.82
FOXN3O00409 RPL21P99-201ENST00000480369 423 ntBASIC3.67□□□□□ -1.82
FOXN3O00409 MTCO2P30-201ENST00000503662 364 ntBASIC3.67□□□□□ -1.82
FOXN3O00409 AC114316.1-201ENST00000511323 278 ntTSL 5 BASIC3.67□□□□□ -1.82
FOXN3O00409 LRRC34P2-201ENST00000514850 553 ntBASIC3.67□□□□□ -1.82
FOXN3O00409 AF235103.2-201ENST00000525753 346 ntBASIC3.67□□□□□ -1.82
FOXN3O00409 CENPUP1-201ENST00000526649 1202 ntBASIC3.67□□□□□ -1.82
FOXN3O00409 AP002004.1-207ENST00000531371 526 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
FOXN3O00409 AP000867.2-201ENST00000532468 320 ntBASIC3.67□□□□□ -1.82
FOXN3O00409 LINC02305-201ENST00000554142 476 ntTSL 3 BASIC3.67□□□□□ -1.82
FOXN3O00409 AL157871.3-201ENST00000557231 293 ntBASIC3.67□□□□□ -1.82
FOXN3O00409 AC007948.1-201ENST00000581632 242 ntTSL 5 BASIC3.67□□□□□ -1.82
FOXN3O00409 MIR548AC-201ENST00000585049 88 ntBASIC3.67□□□□□ -1.82
FOXN3O00409 MIR3922-201ENST00000585192 84 ntBASIC3.67□□□□□ -1.82
FOXN3O00409 UBE2V2P2-201ENST00000587677 504 ntBASIC3.67□□□□□ -1.82
FOXN3O00409 AL117336.2-201ENST00000602435 335 ntBASIC3.67□□□□□ -1.82
FOXN3O00409 MIR7851-201ENST00000610611 160 ntBASIC3.67□□□□□ -1.82
FOXN3O00409 AC099506.2-201ENST00000623074 221 ntBASIC3.67□□□□□ -1.82
FOXN3O00409 AC007405.1-203ENST00000623667 932 ntTSL 5 BASIC3.67□□□□□ -1.82
FOXN3O00409 OR4C16-201ENST00000623907 933 ntAPPRIS P1 BASIC3.67□□□□□ -1.82
FOXN3O00409 AC068544.1-201ENST00000635064 248 ntTSL 5 BASIC3.67□□□□□ -1.82
FOXN3O00409 HSPA4L-202ENST00000505726 2639 ntTSL 2 BASIC3.67□□□□□ -1.82
FOXN3O00409 LRRC39-201ENST00000342895 1881 ntAPPRIS P1 TSL 5 BASIC3.67□□□□□ -1.82
FOXN3O00409 OR10A7-201ENST00000326258 951 ntAPPRIS P1 BASIC3.66□□□□□ -1.82
FOXN3O00409 Y_RNA.33-201ENST00000362591 102 ntBASIC3.66□□□□□ -1.82
FOXN3O00409 RNU6-884P-201ENST00000363889 107 ntBASIC3.66□□□□□ -1.82
FOXN3O00409 Y_RNA.356-201ENST00000365475 113 ntBASIC3.66□□□□□ -1.82
FOXN3O00409 RNU4-20P-201ENST00000365601 151 ntBASIC3.66□□□□□ -1.82
FOXN3O00409 RNU6-1035P-201ENST00000384477 107 ntBASIC3.66□□□□□ -1.82
FOXN3O00409 TRAV39-201ENST00000390466 331 ntAPPRIS P1 BASIC3.66□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 90.2 ms