Protein–RNA interactions for Protein: A1A4V9

CCDC189, Coiled-coil domain-containing protein 189, humanhuman

Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC189A1A4V9 AIF1-202ENST00000376049 524 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
CCDC189A1A4V9 AL359837.1-201ENST00000381357 287 ntBASIC3.28□□□□□ -1.88
CCDC189A1A4V9 LINC01312-201ENST00000412745 775 ntTSL 3 BASIC3.28□□□□□ -1.88
CCDC189A1A4V9 BX295541.1-201ENST00000417774 250 ntBASIC3.28□□□□□ -1.88
CCDC189A1A4V9 LINC00844-201ENST00000432535 477 ntTSL 2 BASIC3.28□□□□□ -1.88
CCDC189A1A4V9 MTCO3P5-201ENST00000433620 714 ntBASIC3.28□□□□□ -1.88
CCDC189A1A4V9 AC122718.1-201ENST00000439448 744 ntBASIC3.28□□□□□ -1.88
CCDC189A1A4V9 LINC02195-201ENST00000443373 294 ntTSL 3 BASIC3.28□□□□□ -1.88
CCDC189A1A4V9 AL451164.2-201ENST00000445932 597 ntTSL 2 BASIC3.28□□□□□ -1.88
CCDC189A1A4V9 AC104058.1-201ENST00000448028 297 ntBASIC3.28□□□□□ -1.88
CCDC189A1A4V9 AL356859.1-201ENST00000449180 414 ntTSL 5 BASIC3.28□□□□□ -1.88
CCDC189A1A4V9 MTCYBP1-201ENST00000454315 1119 ntBASIC3.28□□□□□ -1.88
CCDC189A1A4V9 TSPY5P-202ENST00000456541 142 ntTSL 3 BASIC3.28□□□□□ -1.88
CCDC189A1A4V9 AP001324.2-201ENST00000461163 319 ntBASIC3.28□□□□□ -1.88
CCDC189A1A4V9 AL121769.1-201ENST00000469473 401 ntBASIC3.28□□□□□ -1.88
CCDC189A1A4V9 IGKV2D-30-201ENST00000474213 395 ntAPPRIS P1 BASIC3.28□□□□□ -1.88
CCDC189A1A4V9 AC018437.1-201ENST00000492214 406 ntBASIC3.28□□□□□ -1.88
CCDC189A1A4V9 LINC02146-201ENST00000504244 509 ntTSL 3 BASIC3.28□□□□□ -1.88
CCDC189A1A4V9 RBBP4P6-201ENST00000508098 202 ntBASIC3.28□□□□□ -1.88
CCDC189A1A4V9 AC008957.1-201ENST00000510740 478 ntTSL 3 BASIC3.28□□□□□ -1.88
CCDC189A1A4V9 RNU5B-3P-201ENST00000516601 115 ntBASIC3.28□□□□□ -1.88
CCDC189A1A4V9 SCARNA20.6-201ENST00000517251 106 ntBASIC3.28□□□□□ -1.88
CCDC189A1A4V9 MTCO2P4-201ENST00000517968 247 ntBASIC3.28□□□□□ -1.88
CCDC189A1A4V9 ZNF84-205ENST00000535439 647 ntTSL 5 BASIC3.28□□□□□ -1.88
CCDC189A1A4V9 AC009803.1-201ENST00000551531 416 ntTSL 3 BASIC3.28□□□□□ -1.88
CCDC189A1A4V9 LINC02386-203ENST00000552182 501 ntTSL 3 BASIC3.28□□□□□ -1.88
CCDC189A1A4V9 TTN-AS1-243ENST00000591867 748 ntTSL 5 BASIC3.28□□□□□ -1.88
CCDC189A1A4V9 AC130469.1-201ENST00000597256 388 ntTSL 5 BASIC3.28□□□□□ -1.88
CCDC189A1A4V9 AC008121.1-201ENST00000603244 268 ntBASIC3.28□□□□□ -1.88
CCDC189A1A4V9 ATP1B3P1-201ENST00000605365 821 ntBASIC3.28□□□□□ -1.88
CCDC189A1A4V9 AC069294.1-201ENST00000608397 350 ntBASIC3.28□□□□□ -1.88
CCDC189A1A4V9 USP12-203ENST00000620323 349 ntTSL 3 BASIC3.28□□□□□ -1.88
CCDC189A1A4V9 AC244517.12-201ENST00000623581 663 ntBASIC3.28□□□□□ -1.88
CCDC189A1A4V9 AC138627.2-201ENST00000624202 601 ntBASIC3.28□□□□□ -1.88
CCDC189A1A4V9 SCARNA4-202ENST00000625402 129 ntBASIC3.28□□□□□ -1.88
CCDC189A1A4V9 GABRG2-221ENST00000639683 3600 ntTSL 5 BASIC3.28□□□□□ -1.88
CCDC189A1A4V9 FILIP1L-206ENST00000471562 2854 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
CCDC189A1A4V9 LPP-221ENST00000618621 18277 ntTSL 1 (best) BASIC3.28□□□□□ -1.89
CCDC189A1A4V9 LPP-222ENST00000640853 18277 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.89
CCDC189A1A4V9 CUL3-203ENST00000409096 2701 ntTSL 1 (best) BASIC3.28□□□□□ -1.89
CCDC189A1A4V9 SYNE2-212ENST00000554584 20508 ntTSL 5 BASIC3.27□□□□□ -1.89
CCDC189A1A4V9 CKAP2P1-201ENST00000555477 2049 ntBASIC3.27□□□□□ -1.89
CCDC189A1A4V9 SNORA75B-201ENST00000384053 137 ntBASIC3.27□□□□□ -1.89
CCDC189A1A4V9 RNU6-74P-201ENST00000384235 107 ntBASIC3.27□□□□□ -1.89
CCDC189A1A4V9 RNU6-1179P-201ENST00000384667 107 ntBASIC3.27□□□□□ -1.89
CCDC189A1A4V9 Y_RNA.576-201ENST00000384781 102 ntBASIC3.27□□□□□ -1.89
CCDC189A1A4V9 SNORD17-201ENST00000390930 237 ntBASIC3.27□□□□□ -1.89
CCDC189A1A4V9 AL139095.1-201ENST00000404326 391 ntBASIC3.27□□□□□ -1.89
CCDC189A1A4V9 RNU6ATAC34P-201ENST00000408879 121 ntBASIC3.27□□□□□ -1.89
CCDC189A1A4V9 AC000123.1-201ENST00000418215 516 ntTSL 5 BASIC3.27□□□□□ -1.89
CCDC189A1A4V9 AL353621.1-201ENST00000418219 243 ntBASIC3.27□□□□□ -1.89
CCDC189A1A4V9 AL162254.1-202ENST00000419604 497 ntTSL 5 BASIC3.27□□□□□ -1.89
CCDC189A1A4V9 AC241644.2-201ENST00000426504 480 ntTSL 3 BASIC3.27□□□□□ -1.89
CCDC189A1A4V9 TOMM20P4-201ENST00000427861 435 ntBASIC3.27□□□□□ -1.89
CCDC189A1A4V9 AP001117.1-201ENST00000428205 609 ntTSL 2 BASIC3.27□□□□□ -1.89
CCDC189A1A4V9 CST9LP2-201ENST00000437612 320 ntBASIC3.27□□□□□ -1.89
CCDC189A1A4V9 NFIA-AS1-201ENST00000442027 384 ntTSL 2 BASIC3.27□□□□□ -1.89
CCDC189A1A4V9 AL359853.2-201ENST00000442108 353 ntTSL 2 BASIC3.27□□□□□ -1.89
CCDC189A1A4V9 AC046136.1-201ENST00000459855 533 ntTSL 3 BASIC3.27□□□□□ -1.89
CCDC189A1A4V9 AC117462.1-201ENST00000461186 554 ntTSL 4 BASIC3.27□□□□□ -1.89
CCDC189A1A4V9 AC025518.1-201ENST00000479856 347 ntBASIC3.27□□□□□ -1.89
CCDC189A1A4V9 AC080014.1-201ENST00000496877 1201 ntBASIC3.27□□□□□ -1.89
CCDC189A1A4V9 AC104806.1-201ENST00000508720 308 ntBASIC3.27□□□□□ -1.89
CCDC189A1A4V9 AC117460.1-201ENST00000508964 467 ntTSL 3 BASIC3.27□□□□□ -1.89
CCDC189A1A4V9 AC016553.1-201ENST00000513283 249 ntTSL 3 BASIC3.27□□□□□ -1.89
CCDC189A1A4V9 AP004607.1-201ENST00000524456 203 ntBASIC3.27□□□□□ -1.89
CCDC189A1A4V9 OR4R1P-201ENST00000529879 463 ntBASIC3.27□□□□□ -1.89
CCDC189A1A4V9 AP002992.1-202ENST00000530842 551 ntTSL 2 BASIC3.27□□□□□ -1.89
CCDC189A1A4V9 OR5AL2P-201ENST00000532185 920 ntBASIC3.27□□□□□ -1.89
CCDC189A1A4V9 AL356057.1-201ENST00000533798 831 ntBASIC3.27□□□□□ -1.89
CCDC189A1A4V9 AC023824.2-201ENST00000566185 400 ntBASIC3.27□□□□□ -1.89
CCDC189A1A4V9 AL391840.1-201ENST00000571144 367 ntBASIC3.27□□□□□ -1.89
CCDC189A1A4V9 MTCO3P13-201ENST00000577757 781 ntBASIC3.27□□□□□ -1.89
CCDC189A1A4V9 AC110760.3-201ENST00000598794 467 ntBASIC3.27□□□□□ -1.89
CCDC189A1A4V9 AC096772.1-201ENST00000609146 564 ntBASIC3.27□□□□□ -1.89
CCDC189A1A4V9 AC068631.1-221ENST00000626006 592 ntTSL 5 BASIC3.27□□□□□ -1.89
CCDC189A1A4V9 AL355596.1-201ENST00000565399 3996 ntBASIC3.27□□□□□ -1.89
CCDC189A1A4V9 CHD9-203ENST00000447540 11509 ntTSL 5 BASIC3.27□□□□□ -1.89
CCDC189A1A4V9 EFCAB3-202ENST00000450662 1694 ntTSL 5 BASIC3.27□□□□□ -1.89
CCDC189A1A4V9 RICTOR-202ENST00000357387 9543 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
CCDC189A1A4V9 SYCP2-201ENST00000357552 5567 ntAPPRIS P2 TSL 1 (best) BASIC3.26□□□□□ -1.89
CCDC189A1A4V9 THOC1-219ENST00000616322 2078 ntAPPRIS ALT1 TSL 5 BASIC3.26□□□□□ -1.89
CCDC189A1A4V9 MCMDC2-201ENST00000313616 2043 ntTSL 2 BASIC3.26□□□□□ -1.89
CCDC189A1A4V9 ZNF726-205ENST00000575986 1522 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
CCDC189A1A4V9 RN7SKP202-201ENST00000410439 330 ntBASIC3.26□□□□□ -1.89
CCDC189A1A4V9 CYCSP19-201ENST00000411715 316 ntBASIC3.26□□□□□ -1.89
CCDC189A1A4V9 OR6C66P-201ENST00000414917 930 ntBASIC3.26□□□□□ -1.89
CCDC189A1A4V9 AL162725.2-201ENST00000430545 748 ntTSL 5 BASIC3.26□□□□□ -1.89
CCDC189A1A4V9 KCNJ6-AS1-201ENST00000435001 357 ntTSL 5 BASIC3.26□□□□□ -1.89
CCDC189A1A4V9 AC004383.1-201ENST00000438135 289 ntBASIC3.26□□□□□ -1.89
CCDC189A1A4V9 AL133547.1-201ENST00000448546 220 ntBASIC3.26□□□□□ -1.89
CCDC189A1A4V9 RPL21P10-201ENST00000463521 490 ntBASIC3.26□□□□□ -1.89
CCDC189A1A4V9 LINC02500-201ENST00000512547 493 ntTSL 3 BASIC3.26□□□□□ -1.89
CCDC189A1A4V9 GTF2H2C-212ENST00000512736 832 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
CCDC189A1A4V9 IGKV2-26-201ENST00000518305 343 ntBASIC3.26□□□□□ -1.89
CCDC189A1A4V9 AC013799.1-201ENST00000531157 348 ntTSL 2 BASIC3.26□□□□□ -1.89
CCDC189A1A4V9 AC090023.1-201ENST00000545750 443 ntTSL 3 BASIC3.26□□□□□ -1.89
CCDC189A1A4V9 AF111169.4-202ENST00000553507 262 ntTSL 3 BASIC3.26□□□□□ -1.89
CCDC189A1A4V9 DEFB131E-202ENST00000602581 683 ntBASIC3.26□□□□□ -1.89
CCDC189A1A4V9 AC073657.2-201ENST00000605661 303 ntBASIC3.26□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 108.4 ms