Protein–RNA interactions for Protein: Q9Y5G1

PCDHGB3, Protocadherin gamma-B3, humanhuman

Predictions only

Length 929 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB3Q9Y5G1 MYOT-201ENST00000239926 2337 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
PCDHGB3Q9Y5G1 CDC27P3-201ENST00000635418 1910 ntBASIC3.38□□□□□ -1.87
PCDHGB3Q9Y5G1 MTND4P14-201ENST00000435799 1354 ntBASIC3.38□□□□□ -1.87
PCDHGB3Q9Y5G1 IL1RL1-204ENST00000409584 2693 ntTSL 5 BASIC3.37□□□□□ -1.87
PCDHGB3Q9Y5G1 NOX4-202ENST00000343727 3347 ntTSL 2 BASIC3.37□□□□□ -1.87
PCDHGB3Q9Y5G1 ANKAR-209ENST00000520309 4410 ntAPPRIS P1 TSL 5 BASIC3.37□□□□□ -1.87
PCDHGB3Q9Y5G1 AC068647.1-201ENST00000489539 2265 ntBASIC3.37□□□□□ -1.87
PCDHGB3Q9Y5G1 LINC01416-201ENST00000563553 2310 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
PCDHGB3Q9Y5G1 NBPF20-201ENST00000369373 18760 ntAPPRIS ALT2 TSL 5 BASIC3.37□□□□□ -1.87
PCDHGB3Q9Y5G1 RNU6-1322P-201ENST00000364309 107 ntBASIC3.37□□□□□ -1.87
PCDHGB3Q9Y5G1 RNU6-116P-201ENST00000384042 109 ntBASIC3.37□□□□□ -1.87
PCDHGB3Q9Y5G1 RNU6-166P-201ENST00000384371 107 ntBASIC3.37□□□□□ -1.87
PCDHGB3Q9Y5G1 MIR34A-201ENST00000385130 110 ntBASIC3.37□□□□□ -1.87
PCDHGB3Q9Y5G1 MTCO3P40-201ENST00000392516 676 ntBASIC3.37□□□□□ -1.87
PCDHGB3Q9Y5G1 OR5H8-201ENST00000394191 1045 ntAPPRIS P1 BASIC3.37□□□□□ -1.87
PCDHGB3Q9Y5G1 AL356057.2-201ENST00000403318 432 ntBASIC3.37□□□□□ -1.87
PCDHGB3Q9Y5G1 AL031121.1-201ENST00000406553 254 ntBASIC3.37□□□□□ -1.87
PCDHGB3Q9Y5G1 AL117337.1-201ENST00000412789 444 ntTSL 3 BASIC3.37□□□□□ -1.87
PCDHGB3Q9Y5G1 AC068533.1-201ENST00000418542 415 ntBASIC3.37□□□□□ -1.87
PCDHGB3Q9Y5G1 RPS15AP9-201ENST00000439856 381 ntBASIC3.37□□□□□ -1.87
PCDHGB3Q9Y5G1 AC013727.2-201ENST00000447761 545 ntTSL 4 BASIC3.37□□□□□ -1.87
PCDHGB3Q9Y5G1 BTF3P15-201ENST00000455606 336 ntBASIC3.37□□□□□ -1.87
PCDHGB3Q9Y5G1 AL441985.1-201ENST00000457727 251 ntBASIC3.37□□□□□ -1.87
PCDHGB3Q9Y5G1 AC010401.1-201ENST00000463867 348 ntBASIC3.37□□□□□ -1.87
PCDHGB3Q9Y5G1 SRRM1P2-201ENST00000464531 1192 ntBASIC3.37□□□□□ -1.87
PCDHGB3Q9Y5G1 RPL31P41-201ENST00000477967 372 ntBASIC3.37□□□□□ -1.87
PCDHGB3Q9Y5G1 AC100773.1-201ENST00000505409 520 ntTSL 5 BASIC3.37□□□□□ -1.87
PCDHGB3Q9Y5G1 LINC02100-201ENST00000512978 238 ntTSL 3 BASIC3.37□□□□□ -1.87
PCDHGB3Q9Y5G1 AC021698.1-201ENST00000524858 716 ntTSL 3 BASIC3.37□□□□□ -1.87
PCDHGB3Q9Y5G1 AC008115.2-201ENST00000539988 241 ntTSL 3 BASIC3.37□□□□□ -1.87
PCDHGB3Q9Y5G1 AC092747.1-202ENST00000540595 380 ntTSL 5 BASIC3.37□□□□□ -1.87
PCDHGB3Q9Y5G1 CYCSP39-201ENST00000565821 309 ntBASIC3.37□□□□□ -1.87
PCDHGB3Q9Y5G1 IGKV1OR2-6-201ENST00000603485 277 ntBASIC3.37□□□□□ -1.87
PCDHGB3Q9Y5G1 AC006077.1-201ENST00000604746 343 ntBASIC3.37□□□□□ -1.87
PCDHGB3Q9Y5G1 AC012557.2-201ENST00000605919 418 ntBASIC3.37□□□□□ -1.87
PCDHGB3Q9Y5G1 BX664730.1-201ENST00000616196 800 ntTSL 5 BASIC3.37□□□□□ -1.87
PCDHGB3Q9Y5G1 AL359880.1-201ENST00000621879 266 ntBASIC3.37□□□□□ -1.87
PCDHGB3Q9Y5G1 AC139792.3-201ENST00000623525 224 ntBASIC3.37□□□□□ -1.87
PCDHGB3Q9Y5G1 AC009093.8-201ENST00000641769 292 ntBASIC3.37□□□□□ -1.87
PCDHGB3Q9Y5G1 VPS13C-203ENST00000395896 14579 ntAPPRIS ALT2 TSL 1 (best) BASIC3.37□□□□□ -1.87
PCDHGB3Q9Y5G1 AC004944.1-201ENST00000517807 3059 ntBASIC3.37□□□□□ -1.87
PCDHGB3Q9Y5G1 AC010889.1-201ENST00000566193 2666 ntBASIC3.37□□□□□ -1.87
PCDHGB3Q9Y5G1 LRRTM2-201ENST00000274711 6017 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
PCDHGB3Q9Y5G1 LINC00890-202ENST00000569275 4595 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
PCDHGB3Q9Y5G1 GMFB-208ENST00000554908 6721 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
PCDHGB3Q9Y5G1 LINC00305-201ENST00000323355 873 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
PCDHGB3Q9Y5G1 KIAA1841-202ENST00000356719 2149 ntTSL 5 BASIC3.36□□□□□ -1.87
PCDHGB3Q9Y5G1 RNU6-1085P-201ENST00000363576 107 ntBASIC3.36□□□□□ -1.87
PCDHGB3Q9Y5G1 RNU6-371P-201ENST00000364283 108 ntBASIC3.36□□□□□ -1.87
PCDHGB3Q9Y5G1 U3.39-201ENST00000408569 239 ntBASIC3.36□□□□□ -1.87
PCDHGB3Q9Y5G1 Y_RNA.623-201ENST00000411128 95 ntBASIC3.36□□□□□ -1.87
PCDHGB3Q9Y5G1 NDUFB4P5-201ENST00000415445 361 ntBASIC3.36□□□□□ -1.87
PCDHGB3Q9Y5G1 AC010967.2-201ENST00000418451 333 ntTSL 2 BASIC3.36□□□□□ -1.87
PCDHGB3Q9Y5G1 LINC02263-203ENST00000426240 515 ntTSL 5 BASIC3.36□□□□□ -1.87
PCDHGB3Q9Y5G1 MTCO3P30-201ENST00000426425 670 ntBASIC3.36□□□□□ -1.87
PCDHGB3Q9Y5G1 AL033504.1-201ENST00000427015 773 ntTSL 2 BASIC3.36□□□□□ -1.87
PCDHGB3Q9Y5G1 AC006946.1-201ENST00000429106 328 ntBASIC3.36□□□□□ -1.87
PCDHGB3Q9Y5G1 AL589823.1-201ENST00000429577 183 ntBASIC3.36□□□□□ -1.87
PCDHGB3Q9Y5G1 RPL23AP58-201ENST00000440453 469 ntBASIC3.36□□□□□ -1.87
PCDHGB3Q9Y5G1 AL592182.1-201ENST00000440897 250 ntTSL 5 BASIC3.36□□□□□ -1.87
PCDHGB3Q9Y5G1 AC069542.1-201ENST00000445235 557 ntTSL 3 BASIC3.36□□□□□ -1.87
PCDHGB3Q9Y5G1 AC104688.1-201ENST00000447158 419 ntTSL 3 BASIC3.36□□□□□ -1.87
PCDHGB3Q9Y5G1 AC006026.2-201ENST00000457376 180 ntBASIC3.36□□□□□ -1.87
PCDHGB3Q9Y5G1 AL162395.1-201ENST00000457882 422 ntBASIC3.36□□□□□ -1.87
PCDHGB3Q9Y5G1 RPS3AP14-201ENST00000483907 780 ntBASIC3.36□□□□□ -1.87
PCDHGB3Q9Y5G1 LINC02174-201ENST00000508977 553 ntTSL 3 BASIC3.36□□□□□ -1.87
PCDHGB3Q9Y5G1 AC110768.1-201ENST00000509222 400 ntBASIC3.36□□□□□ -1.87
PCDHGB3Q9Y5G1 SCARNA11.3-201ENST00000517276 130 ntBASIC3.36□□□□□ -1.87
PCDHGB3Q9Y5G1 AP006245.1-201ENST00000522549 120 ntBASIC3.36□□□□□ -1.87
PCDHGB3Q9Y5G1 LINC00508-201ENST00000538901 194 ntTSL 5 BASIC3.36□□□□□ -1.87
PCDHGB3Q9Y5G1 AC006199.1-201ENST00000548728 219 ntBASIC3.36□□□□□ -1.87
PCDHGB3Q9Y5G1 G2E3-AS1-204ENST00000552511 402 ntTSL 2 BASIC3.36□□□□□ -1.87
PCDHGB3Q9Y5G1 MEG8-215ENST00000555354 469 ntTSL 3 BASIC3.36□□□□□ -1.87
PCDHGB3Q9Y5G1 LINC00519-201ENST00000557518 682 ntTSL 2 BASIC3.36□□□□□ -1.87
PCDHGB3Q9Y5G1 LINC02253-201ENST00000559321 448 ntTSL 2 BASIC3.36□□□□□ -1.87
PCDHGB3Q9Y5G1 AC022601.1-201ENST00000596954 577 ntTSL 4 BASIC3.36□□□□□ -1.87
PCDHGB3Q9Y5G1 AC010620.2-201ENST00000600135 313 ntBASIC3.36□□□□□ -1.87
PCDHGB3Q9Y5G1 SMAD5-AS1_1.1-201ENST00000619886 266 ntBASIC3.36□□□□□ -1.87
PCDHGB3Q9Y5G1 AC090617.7-201ENST00000623952 126 ntBASIC3.36□□□□□ -1.87
PCDHGB3Q9Y5G1 LUZP2-208ENST00000620308 4981 ntTSL 5 BASIC3.36□□□□□ -1.87
PCDHGB3Q9Y5G1 ASNSP3-201ENST00000451989 1306 ntBASIC3.36□□□□□ -1.87
PCDHGB3Q9Y5G1 CKAP2P1-201ENST00000555477 2049 ntBASIC3.36□□□□□ -1.87
PCDHGB3Q9Y5G1 LMBRD1-201ENST00000370570 2099 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
PCDHGB3Q9Y5G1 Z83843.1-201ENST00000604070 3685 ntBASIC3.35□□□□□ -1.87
PCDHGB3Q9Y5G1 RNF17-201ENST00000255324 5119 ntAPPRIS P1 TSL 2 BASIC3.35□□□□□ -1.87
PCDHGB3Q9Y5G1 IL33-202ENST00000417746 2327 ntTSL 2 BASIC3.35□□□□□ -1.87
PCDHGB3Q9Y5G1 RNU6-996P-201ENST00000365438 107 ntBASIC3.35□□□□□ -1.87
PCDHGB3Q9Y5G1 TRAV39-201ENST00000390466 331 ntAPPRIS P1 BASIC3.35□□□□□ -1.87
PCDHGB3Q9Y5G1 EEF1A1P40-201ENST00000412883 573 ntBASIC3.35□□□□□ -1.87
PCDHGB3Q9Y5G1 AC003985.1-201ENST00000414127 362 ntTSL 3 BASIC3.35□□□□□ -1.87
PCDHGB3Q9Y5G1 AC092660.1-201ENST00000420648 371 ntTSL 2 BASIC3.35□□□□□ -1.87
PCDHGB3Q9Y5G1 AC009414.1-201ENST00000427200 443 ntBASIC3.35□□□□□ -1.87
PCDHGB3Q9Y5G1 TOMM20P4-201ENST00000427861 435 ntBASIC3.35□□□□□ -1.87
PCDHGB3Q9Y5G1 CYCSP4-201ENST00000429682 331 ntBASIC3.35□□□□□ -1.87
PCDHGB3Q9Y5G1 AC091286.1-201ENST00000431233 461 ntBASIC3.35□□□□□ -1.87
PCDHGB3Q9Y5G1 AL157882.1-201ENST00000447148 429 ntTSL 3 BASIC3.35□□□□□ -1.87
PCDHGB3Q9Y5G1 AC069549.1-201ENST00000451584 499 ntTSL 3 BASIC3.35□□□□□ -1.87
PCDHGB3Q9Y5G1 RNU6-261P-201ENST00000459506 102 ntBASIC3.35□□□□□ -1.87
PCDHGB3Q9Y5G1 RPS4XP22-201ENST00000480755 780 ntBASIC3.35□□□□□ -1.87
PCDHGB3Q9Y5G1 DNAJC12-205ENST00000483798 769 ntTSL 3 BASIC3.35□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 121.7 ms